EY755839

Overview
NameEY755839
Unique NameEY755839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_RHDSA (ATP synthase subunit delta, chloroplastic OS=Rhodomonas salina GN=atpD PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.527e-11
Identity = 46/176 (26.14%), Postives = 91/176 (51.70%), Query Frame = -3
Query:  149 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSE-KQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 673
            VA  YA A +++A   + +     D+  I    SE K + +   NP +    K++++  I   + +   T  F+ +L D  R++ +  I +    +  K  + EMA V+S VKL S     +  +++ +T A  ++++  +D SL+ GF ++ G    ++ID SV+ QL+++++ L
Sbjct:    8 VAKPYADAFIEIANKGSVIN----DLNCIATALSESKDLQKAIANPLVSSAAKKDIIKSIFAGN-VDENTVKFMMVLCDRGRIEYLDAIAETALILAYKQASIEMAYVASSVKLSSAQTEALVDKLKAMTKADQIKLELKVDESLIGGFKVQIGS---RIIDTSVQNQLKQLSSYL 175          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_CLOD6 (ATP synthase subunit delta OS=Clostridium difficile (strain 630) GN=atpH PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.527e-11
Identity = 46/181 (25.41%), Postives = 92/181 (50.83%), Query Frame = -3
Query:  149 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSE--KQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 685
            M   +A  YA AL  L +  N+ +    ++EK+  + ++  K  ++   +P +   +K+ +V EI  S  +     NFL +L+D  R+  ++DI   ++E+ NK  N    V  S + +    + ++  ++      KNV I+ V+D +++ G  +R G    + ID +VK +L+++  +L
Sbjct:    1 MINVIANRYAEALFQLGEEENSTDVLFKELEKVVDMMTKVSKDFYKVLKSPLVSKSEKKNLV-EIIFSKEVSSNIKNFLKVLVDKDRISYLEDIELAYKELLNKKNNVIDGVAISAIPMSETDIKELEVKLSNKYN-KNVTIENVVDKTILGGVLVRIGN---EQIDGTVKTRLDKMKEKL 176          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_LACDA (ATP synthase subunit delta OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=atpH PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.994e-11
Identity = 46/177 (25.99%), Postives = 92/177 (51.98%), Query Frame = -3
Query:  149 ATXYAIALVDLAKANNTLESTSADVEKIEK-IFSEKQIHEFFVNPTIDIEKKREMVDEICK--SSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 670
            A  Y  A+ D AK +   E   +++ +++K + +E +  +   NP +D ++K+ ++  + +  S+ LQ +    LN L+   R D + DI+  +  +YN   +    V  +V+KL+ + L ++A    K  G + + ++  +DP ++ G  +       ++ID SVK +LE+I A L
Sbjct:    9 ARRYGTAIFDFAKDSGKTELMYSELTELKKAVQAEPRFVQVLSNPVLDAKQKKSLLTAVEQGFSAELQEV----LNFLLSYDRFDNLVDIIDYYIHLYNAANHIGTGVAKTVLKLDEDQLQRLADSYAKKYGLQALHLENEVDPEIIGGVVLEVEG---RVIDGSVKHRLEKIRAML 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_THICR (ATP synthase subunit delta OS=Thiomicrospira crunogena (strain XCL-2) GN=atpH PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.605e-11
Identity = 50/182 (27.47%), Postives = 86/182 (47.25%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVI------DPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            T+A  YA A  ++AK    L   S  +  +  I S++ +  + VNP++  E   +++ ++  S+ L     N LN++ + KR+D + ++ + FEE+         A V S  K   E       Q +KL+ A N +    +      DPSL++G  I+ G W    ID S   QL ++ A +
Sbjct:    6 TIARPYAEAAFEVAKEEGKLVEWSEQLANLSAIVSDETMTAYMVNPSVTSEDVLKLLVDVMDSN-LNSEVKNLLNVMAENKRLDALSEVAEVFEELKATEDKRVRATVISARKATVE-------QKKKLSAALNAKFDAEVEITYEEDPSLISGIKIKVGDWA---IDGSALSQLNKLGAAI 176          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SYNS3 (ATP synthase subunit delta OS=Synechococcus sp. (strain CC9311) GN=atpH PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.605e-11
Identity = 43/177 (24.29%), Postives = 85/177 (48.02%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIF-SEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            ++AT YA AL+ +       E  +   + +   + S + + +   +P ++ E K++ +  +  S  + P   N L +L D +R+  ++ ++  + E+Y +  N  +A V +   L  E  A +  +VQ + G   V I   +DPSL+ GF +  G    ++ID S+  Q+  +   L
Sbjct:    6 SLATPYADALLQVTDVRQESEEVANQCKDLLSAWESSEPLRDAMTSPVLEPEAKKKALTSLL-SEQVTPSLMNLLKVLADRQRLPALEAVLLRYLELYRESRNIALAHVRAAQPLTEEQQAALTTKVQSMAGTNAVEIDLKVDPSLIGGFVVNLGS---QVIDASLSGQVRRLGLAL 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SYNAS (ATP synthase subunit delta OS=Syntrophus aciditrophicus (strain SB) GN=atpH PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.605e-11
Identity = 45/176 (25.57%), Postives = 87/176 (49.43%), Query Frame = -3
Query:  161 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFS-EKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEI 685
            +++ +A  YA A  D+A  +   E    ++    +I   ++ + EF  NP  +  +K+ +V+ I +   +  +T NFL +L+D KR+ ++ +I   +  + +++       V +   L ++  + I + ++++TG K   I    D SL+ G  IR G     L D S+K QL  I
Sbjct:    2 INSGIAKRYARAFFDIAGEDKLYEKYYEELSGFARIVQGDRNLKEFLANPVFNQAEKKAVVEAIIQKIRMSDMTTNFLKLLVDKKRIGMLAEIADYYRVLMDEVLKRVRVSVKTAFPLPADVTSDIKQGLEQMTG-KQTEIVVEEDRSLLGGIVIRVGD---TLYDGSIKTQLSNI 173          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_CLOPH (ATP synthase subunit delta OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=atpH PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.605e-11
Identity = 49/180 (27.22%), Postives = 88/180 (48.89%), Query Frame = -3
Query:  149 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 685
            M+  V+  Y  AL DLA  N +L+    +++ ++ +F+E  ++ +F  +P I  E+K   V+ I K      +TG FL I+I   R D +  I   F     +  N  +A V+S V++  +   QI  ++   T      +   +D S++ G  IR G    +++D S+K +L  ++  L
Sbjct:    1 MAKLVSKTYGEALFDLALENQSLDIIEEEIKAVKMVFNENTELIKFLNHPKITKEEKVAFVENIFKGRVSDDVTG-FLVIIIKKGRYDEISGIFDYFLAKVREHKNIGVAYVTSAVEISEQEKEQIKDKLLATTKYVQFEMNYKVDASILGGLIIRIGD---RVVDSSLKSKLNTLSKNL 176          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPO_PONAB (ATP synthase subunit O, mitochondrial OS=Pongo abelii GN=ATP5O PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.402e-11
Identity = 44/170 (25.88%), Postives = 86/170 (50.59%), Query Frame = -3
Query:  158 YAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQK--LTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIA 661
            YA AL   A   N LE    ++ ++ +I  E ++    +NP +    K + +++I       PLT N +N+L +  R+   + +V  F  + +         V+S   LE   L+++ K V K  L+  + ++++   DPS++ G  +R G+   K +DMSVK ++++++
Sbjct:   41 YATALYSAASKQNKLEQVEKELLRVAQILKEPKVAAPVLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSAHRGEVPCTVTSASPLEEATLSEL-KTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGE---KYVDMSVKTKIQKLS 206          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPO_HUMAN (ATP synthase subunit O, mitochondrial OS=Homo sapiens GN=ATP5O PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.402e-11
Identity = 44/169 (26.04%), Postives = 85/169 (50.30%), Query Frame = -3
Query:  161 YAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQK--LTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEI 661
            YA AL   A   N LE    ++ ++ +I  E ++    +NP +    K + +++I       PLT N +N+L +  R+   + +V  F  + +         V+S   LE   L+++ K V K  L+  + ++++   DPS++ G  +R G+   K +DMSVK +++++
Sbjct:   41 YATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASVLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSEL-KTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGE---KYVDMSVKTKIQKL 205          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_GEOMG (ATP synthase subunit delta OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=atpH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.402e-11
Identity = 47/183 (25.68%), Postives = 84/183 (45.90%), Query Frame = -3
Query:  140 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFS-EKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLG 685
            +S  +A  YA ALV L    + ++   A++ +   +      I     +P   IE KRE++ ++    +L     NFL +L+D  R+  +  I   +    ++++     V++S   LE   +  +   + K TG K V++   ++PSL+ G   + G    K+ D SV+ QL  I   L  G
Sbjct:    2 ISNAIARRYAKALVQLGAEEDAVDRFGAELGQFAALLEGNADIDSVLKSPAYRIEAKREILKDVLAKLSLSGTVSNFLQVLLDRGRISFLPQIAHSYAAFADELSGVIRPVLTSAFPLEDAQVESMKGALVKATG-KKVQLSVQVEPSLIGGVITKIGD---KVFDGSVRTQLNRIQDILQKG 180          
The following BLAST results are available for this feature:
BLAST of EY755839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
ATPD_RHDSA1.527e-1126.14ATP synthase subunit delta, chloroplastic OS=Rhodo... [more]
ATPD_CLOD61.527e-1125.41ATP synthase subunit delta OS=Clostridium difficil... [more]
ATPD_LACDA1.994e-1125.99ATP synthase subunit delta OS=Lactobacillus delbru... [more]
ATPD_THICR2.605e-1127.47ATP synthase subunit delta OS=Thiomicrospira cruno... [more]
ATPD_SYNS32.605e-1124.29ATP synthase subunit delta OS=Synechococcus sp. (s... [more]
ATPD_SYNAS2.605e-1125.57ATP synthase subunit delta OS=Syntrophus aciditrop... [more]
ATPD_CLOPH2.605e-1127.22ATP synthase subunit delta OS=Clostridium phytofer... [more]
ATPO_PONAB3.402e-1125.88ATP synthase subunit O, mitochondrial OS=Pongo abe... [more]
ATPO_HUMAN3.402e-1126.04ATP synthase subunit O, mitochondrial OS=Homo sapi... [more]
ATPD_GEOMG3.402e-1125.68ATP synthase subunit delta OS=Geobacter metallired... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-D11-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755839 ID=EY755839; Name=EY755839; organism=Citrus sinensis; type=EST; length=909bp
TTTTTTTTTTTTTTTTTTTTCCTTAACAAATAAAAATGTTTTACAAACAA
ACTTCAATCAAATTATACAAAACCAAATTCAGAAAACGAAAAAAAAAAAA
ATTCCTTCAAAAATCATATCATACAGCAAGTTGGACATCACCCAAATCAA
GCTGAGCAGCGATCTCCTCCAACTGTTTCTTGACACTCATATCAATCAAC
TTAAACCCCCACTTCCCATACCGGATCGTAAAACCCGCCACCAAGCTCGG
GTCAATCACGGTCTTTATCCTCACATTCTTGGCCCCAGTCAACTTCTGGA
CTTGCTTCGCTATCTGAGCCAAATGCTCCGACTCCAGCTTCACCACCGAG
CTCACCACCGCCATCTCCGTATTCGTCATCTTATTATACACCTCCTCGAA
CTCCTTCACTATGTCCTTCACCACGTCCACCCTCTTCGCGTCGATCAGTA
TGTTCAAGAAATTCCCGGTCAGCGGCTGCAGCGCCGACGACTTGCATATC
TCGTCCACCATCTCTCTTTTCTTCTCGATATCGATGGTGGGGTTCACGAA
GAACTCATGGATTTGTTTCTCGCTGAAGATTTTCTCGATCTTTTCCACGT
CGGCGCTCGTGGACTCGAGGGTGTTGTTCGCTTTCGCCAAGTCCACCAGC
GCGATGGCGTANCTGGTCGCCACTGTGGCTGACATTCTGATTCCGTGGGC
GCCCCCCCNGCGTGGGCCGGAAGGGATGTTGGCCGATAATGGGTTTCGAG
AGGCCCCCCGNNCGNAGGGAANAGTTTGATTGNATTGAAAGGGTTCCGGT
TGCTAAAAAACCCCCTTTTCCGATGAAACCCTTATCTGATCTGAGCAACG
CTTAGCTAAGCTGCTCTTTGCTGCCCAAAAAGAGCCGAAGAAAGAGTATC
AAGACGGGG
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