EY755839

Overview
NameEY755839
Unique NameEY755839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_BACSK (ATP synthase subunit delta OS=Bacillus clausii (strain KSM-K16) GN=atpH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.402e-11
Identity = 44/179 (24.58%), Postives = 88/179 (49.16%), Query Frame = -3
Query:  140 VATXYAIALVDLAKANNTLESTSADVEKIEKIF-SEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLG 673
            VA  YA+AL +LA+     +    ++E ++++F +  Q+      P +  +KK+ ++ +  ++  L P   N +N+L++  R   +  +  E++++ +       A V SV  L      QIA       G + +R+  V+D +L+ G  +R G    ++ D S++ QL+ +  QL  G
Sbjct:    6 VANRYAVALFELAEEKGQTDVFERELELVQEVFETTPQLETVLAQPGLAADKKQALLRDAFQAH-LSPAVMNTINLLMERGRYSEIVGLAGEYKQLNDDKKGIAEATVFSVKALSDSEKNQIAAVFAPKAGKRELRVVNVVDSALIGGLKVRVGD---RVFDGSIQGQLKRLEKQLVAG 180          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_LACH4 (ATP synthase subunit delta OS=Lactobacillus helveticus (strain DPC 4571) GN=atpH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.443e-11
Identity = 43/176 (24.43%), Postives = 91/176 (51.70%), Query Frame = -3
Query:  149 VATXYAIALVDLAKANNTLESTSADVEKIEK-IFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 673
            VA  Y  AL   A+ N  L++   ++ +++K + +  Q+     +P ++ + K++ +  I K+ + +     FLN+L++  R   + DI+ +F  +Y+          ++ VKL+ + L ++     K      VR++  +DPS++ G  ++      ++ID SVK +L++I AQ+
Sbjct:    8 VAARYGAALFGYAQDNKVLDNVYDEMMELKKAVIATPQVISVLSDPILNSKDKKDFLTAIEKNFSEE--VQGFLNLLLEYDRFAYLVDIIDQFAVLYDDKNKIASGTATTAVKLDDDQLKRLGDGFAKKYNLNTVRLENKVDPSILGGVILQVKD---RVIDGSVKNKLKKIRAQI 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_DESHY (ATP synthase subunit delta OS=Desulfitobacterium hafniense (strain Y51) GN=atpH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.443e-11
Identity = 46/180 (25.56%), Postives = 97/180 (53.89%), Query Frame = -3
Query:  149 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 685
            +   +A  YA AL +LA   N L+   A+++++ +   +  ++     +P I + +K++++++I  +  L     NFLN+LID +R + + +I + F  + ++  N   A V+S + L      ++ +++ ++TG KNVR+   + P L+ G  I+ G    +++D +V  +L+ I   L
Sbjct:    2 LKGAIAQRYAQALFELAVQEN-LDGIEAELQELVQCVEQNAEVAHVLYHPHISLSEKKDLMNKIF-AGELSVTVRNFLNLLIDRRRQNYLMEIARVFAHLADEARNIVEAKVASAIPLSETQEQRLHQELARMTG-KNVRMVKEVRPELIGGVMIQIGD---RVMDGTVAFKLQRIRQSL 175          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_BACST (ATP synthase subunit delta OS=Bacillus stearothermophilus GN=atpH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.443e-11
Identity = 46/176 (26.14%), Postives = 80/176 (45.45%), Query Frame = -3
Query:  149 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 673
            +A  YA AL  +A     L+    DV  + +  +E  +      NP + +EKK+ +V E+   + +     N L +L++  R  +V ++  +F  + N       A+  S   L  E L  ++    K  G   + I+ +++P L+ G  +R G    ++ D SV  QLE I  QL
Sbjct:    6 IAKRYASALFQIALEQQQLDRIEEDVRAVRQALAENGEFLSLLSNPNLSLEKKKALVREV--FAGVSAPVKNTLLLLLERHRFGLVPELADQFIALANDARGIAEAIAYSARPLTDEELQALSDVFAKKVGKATLHIENIVEPELIGGVKLRIGN---RIYDGSVSGQLERIQRQL 176          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_VEREI (ATP synthase subunit delta OS=Verminephrobacter eiseniae (strain EF01-2) GN=atpH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 49/181 (27.07%), Postives = 91/181 (50.28%), Query Frame = -3
Query:  149 ATVATXYAIALVDLAK-ANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSA---LQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 679
            AT+A  YA AL      A     S +A ++++  I    ++ +   NP +  ++   +  ++ K +A   L  + GNFL  +I   R++V+  + ++F  + N+      AVV S   ++S  L+++   +QK  G K + +    DPSL+ G  +  G    +++D SVK +LE++ A L
Sbjct:    5 ATIARPYAEALFKATTGAGVDPVSAAAWLDELAAIADRPELRQLAGNPKVTADQVFALFTQVLKDAARAALPEMAGNFLRTVIANGRINVLTQVAQQFRALLNRRNGFSDAVVYSAFPMDSAALSEVGAALQKRFGRK-LNLAVQQDPSLIGGIRVVVGD---EVLDSSVKARLEQMKAAL 181          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_RHOFD (ATP synthase subunit delta OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=atpH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 48/177 (27.12%), Postives = 91/177 (51.41%), Query Frame = -3
Query:  149 ATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 679
            AT+A  YA AL   + ++  L   +  VE++E I    Q+ +F  NP +   +  E++  I +  AL  +  NFL  +I+  R+  + +I  +F  + N  + +  AVV S   ++S  LA++A  +++   A+ + +   + P L+ G  +  G    +++D SVK +LE++   L
Sbjct:    5 ATIARPYAEALFKASLSD--LNGAAVWVEELETIAKNPQLLQFADNPNVTAAQVYELIAGIAQG-ALPAMAQNFLRTVIENGRLSALPEIAAQFRVMKNAQSGSSDAVVYSAFAIDSTALAELAATLEQ-RFARKLNVSVQLQPELIGGIRVVVGD---EVLDSSVKARLEQMKMAL 174          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_DESHD (ATP synthase subunit delta OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=atpH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 46/180 (25.56%), Postives = 97/180 (53.89%), Query Frame = -3
Query:  149 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 685
            +   +A  YA AL +LA   N L+   A+++++ +   +  ++     +P I + +K++++++I  +  L     NFLN+LID +R + + +I + F  + ++  N   A V+S + L      ++ +++ ++TG KNVR+   + P L+ G  I+ G    +++D +V  +L+ I   L
Sbjct:    2 LKGAIAQRYAQALFELAVQEN-LDGIEAELQELVQCVEQNAEVAHVLYHPHISLSEKKDLMNKIF-AGELSVTVRNFLNLLIDRRRQNYLLEIARVFARLADEARNIVEAKVASAIPLSETQEQRLHQELARMTG-KNVRMVKEVRPELIGGVMIQIGD---RVMDGTVAFKLQRIRQSL 175          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_RICBR (ATP synthase subunit delta OS=Rickettsia bellii (strain RML369-C) GN=atpH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 44/172 (25.58%), Postives = 85/172 (49.42%), Query Frame = -3
Query:  149 YAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 661
            YA+AL D AK++NT +    +V  +  I  +  ++ E   +P ++   K  +++ + K+  +  +  NFL +LI   R  ++ DI   + ++  +  N ++  V S  KL+      +   ++K    +  +I   IDP+++ G  I+Y      L D S+K  L++IA  L
Sbjct:   10 YAVALFDNAKSDNTQDKILEEVNLVTSIIEDNIEVKELLSSPIVNKVDKIGVINSLVKNIKISKIMQNFLLLLIKNSRTSILADIANTYSKLLYESKNIKIVQVISANKLKPTEQEWVKTNIEKEL-KQETKINFEIDPTIMGGIVIKYDS---ILQDYSIKGSLDKIAKAL 177          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_RICB8 (ATP synthase subunit delta OS=Rickettsia bellii (strain OSU 85-389) GN=atpH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 44/172 (25.58%), Postives = 85/172 (49.42%), Query Frame = -3
Query:  149 YAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 661
            YA+AL D AK++NT +    +V  +  I  +  ++ E   +P ++   K  +++ + K+  +  +  NFL +LI   R  ++ DI   + ++  +  N ++  V S  KL+      +   ++K    +  +I   IDP+++ G  I+Y      L D S+K  L++IA  L
Sbjct:   10 YAVALFDNAKSDNTQDKILEEVNLVTSIIEDNIEVKELLSSPIVNKVDKIGVINSLVKNIKISKIMQNFLLLLIKNSRTSILADIANTYSKLLYESKNIKIVQVISANKLKPTEQEWVKTNIEKEL-KQETKINFEIDPTIMGGIVIKYDS---ILQDYSIKGSLDKIAKAL 177          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_ODOSI (ATP synthase subunit delta, chloroplastic OS=Odontella sinensis GN=atpD PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 46/200 (23.00%), Postives = 94/200 (47.00%), Query Frame = -3
Query:  146 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKS-------------------SALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLD 685
            +++ +A  YA AL D +   N +   +AD + +E   ++   + E+  NP I  + K E++++  KS                   + L+P+  ++LN++ +A  V +++                    VS+     +     + K++++LT A+ +R+   +D SL+ GF I   K   K++D ++K QL+++A  LD
Sbjct:    6 LASKIAAPYARALFDFSVDQNLMHQITADFQNLEVFLNKTPDLTEYLSNPLISAKSKEEVLNKTLKSQINKETFKFLIVLVNRSRINLLEPIIASYLNLVYNAASVKMIE--------------------VSTAYAFTNLQKNTLIKKLKELTNAREIRLVITVDSSLIGGFLI---KTNSKVLDFTIKNQLQKLAKHLD 182          
The following BLAST results are available for this feature:
BLAST of EY755839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
ATPD_BACSK3.402e-1124.58ATP synthase subunit delta OS=Bacillus clausii (st... [more]
ATPD_LACH44.443e-1124.43ATP synthase subunit delta OS=Lactobacillus helvet... [more]
ATPD_DESHY4.443e-1125.56ATP synthase subunit delta OS=Desulfitobacterium h... [more]
ATPD_BACST4.443e-1126.14ATP synthase subunit delta OS=Bacillus stearotherm... [more]
ATPD_VEREI5.803e-1127.07ATP synthase subunit delta OS=Verminephrobacter ei... [more]
ATPD_RHOFD5.803e-1127.12ATP synthase subunit delta OS=Rhodoferax ferriredu... [more]
ATPD_DESHD5.803e-1125.56ATP synthase subunit delta OS=Desulfitobacterium h... [more]
ATPD_RICBR9.898e-1125.58ATP synthase subunit delta OS=Rickettsia bellii (s... [more]
ATPD_RICB89.898e-1125.58ATP synthase subunit delta OS=Rickettsia bellii (s... [more]
ATPD_ODOSI9.898e-1123.00ATP synthase subunit delta, chloroplastic OS=Odont... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-D11-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755839 ID=EY755839; Name=EY755839; organism=Citrus sinensis; type=EST; length=909bp
TTTTTTTTTTTTTTTTTTTTCCTTAACAAATAAAAATGTTTTACAAACAA
ACTTCAATCAAATTATACAAAACCAAATTCAGAAAACGAAAAAAAAAAAA
ATTCCTTCAAAAATCATATCATACAGCAAGTTGGACATCACCCAAATCAA
GCTGAGCAGCGATCTCCTCCAACTGTTTCTTGACACTCATATCAATCAAC
TTAAACCCCCACTTCCCATACCGGATCGTAAAACCCGCCACCAAGCTCGG
GTCAATCACGGTCTTTATCCTCACATTCTTGGCCCCAGTCAACTTCTGGA
CTTGCTTCGCTATCTGAGCCAAATGCTCCGACTCCAGCTTCACCACCGAG
CTCACCACCGCCATCTCCGTATTCGTCATCTTATTATACACCTCCTCGAA
CTCCTTCACTATGTCCTTCACCACGTCCACCCTCTTCGCGTCGATCAGTA
TGTTCAAGAAATTCCCGGTCAGCGGCTGCAGCGCCGACGACTTGCATATC
TCGTCCACCATCTCTCTTTTCTTCTCGATATCGATGGTGGGGTTCACGAA
GAACTCATGGATTTGTTTCTCGCTGAAGATTTTCTCGATCTTTTCCACGT
CGGCGCTCGTGGACTCGAGGGTGTTGTTCGCTTTCGCCAAGTCCACCAGC
GCGATGGCGTANCTGGTCGCCACTGTGGCTGACATTCTGATTCCGTGGGC
GCCCCCCCNGCGTGGGCCGGAAGGGATGTTGGCCGATAATGGGTTTCGAG
AGGCCCCCCGNNCGNAGGGAANAGTTTGATTGNATTGAAAGGGTTCCGGT
TGCTAAAAAACCCCCTTTTCCGATGAAACCCTTATCTGATCTGAGCAACG
CTTAGCTAAGCTGCTCTTTGCTGCCCAAAAAGAGCCGAAGAAAGAGTATC
AAGACGGGG
back to top