EY755839

Overview
NameEY755839
Unique NameEY755839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_BACAA (ATP synthase subunit delta OS=Bacillus anthracis (strain A0248) GN=atpH PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.077e-17
Identity = 55/176 (31.25%), Postives = 90/176 (51.14%), Query Frame = -3
Query:  149 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 673
            VA  YA+AL  +AK  + LE    ++  ++ ++ +  ++H F   P I  E+K+  +  +  S +   L  N L ILID KR+D++ DI  E+  + N+  N   A V S   L  E    IA+   K TG   +R+K V+D  L+ G  +R G    ++ D S++ +L  I  +L
Sbjct:    6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVVDEDLLGGIKVRIGN---RIYDGSLQGKLARIQREL 176          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SYNP2 (ATP synthase subunit delta OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=atpH PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.243e-17
Identity = 56/183 (30.60%), Postives = 95/183 (51.91%), Query Frame = -3
Query:  149 GIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 694
            G  M A V   YA AL+ LA+  N +E+ + +   +  +F E  +   F +NP +  E K+ ++  +C    +     NFL +L+D +R+  ++ I +EF  +  K+ N  +A V+S   L ++  A IA QV+++TGA  V +    D  L+ G  I+ G    K+ D S++ QL  I+  L
Sbjct:    3 GNTMIAQVVEPYAGALMTLAQETNKVEAFAENCRALLSLFQESAEFRSFVMNPLVKAEDKKGVLQGVCGQD-VDTYFLNFLFLLVDRRRIVFLEGICQEFVALQRKLNNIVLADVTSAQPLTTDQEAAIADQVKQMTGANAVELNISTDADLIGGVVIKVGS---KVFDASLRGQLRRISMDL 181          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SYNJA (ATP synthase subunit delta OS=Synechococcus sp. (strain JA-3-3Ab) GN=atpH PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.243e-17
Identity = 54/180 (30.00%), Postives = 97/180 (53.89%), Query Frame = -3
Query:  149 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIF-SEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 685
            M+A V   YA ALV LA A   L++  AD+  I  +  +  ++ +F  +P +  E K+ ++ ++  +  + PL  N L +L D +R+  +  + + F E+  K+ N  +A V++ V L       I ++V+  T A  V ++T  DP+L+ G  I+ G    ++ID+S++ QL  +A QL
Sbjct:    6 MAARVVDPYAEALVSLASAQGLLDTFEADIRFIAAVVQATPELGQFLASPLVKAEAKKNLLQQVF-ADQIHPLLLNALKLLSDRRRIMFLGAVCQRFLELQRKLKNIVLAEVTTAVPLTEAQQQSIRERVRDFTQASGVELQTSQDPTLLGGVIIKIGS---QVIDLSLRGQLRRLALQL 181          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PROMP (ATP synthase subunit delta OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=atpH PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.243e-17
Identity = 49/177 (27.68%), Postives = 94/177 (53.11%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            +V T YA AL+ +   N+  E    +V+++  + ++   + +   +P ++ + K++++ EI        L  NFL +L D +R+ +V  I+  F E+Y + +N  +A V+S V+L  +    I K++  + G + + + T IDPSL+ GF    G    K+ID S+  Q+ ++   L
Sbjct:    6 SVTTPYAEALLQVVSENDQTEEMVKEVKQLLSLINDSPDLEKTLSSPVLETDTKKKIIIEIFSEKINSSLL-NFLKLLADRQRIGIVTSILDRFLEIYRENSNIALATVTSAVELTDDQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGS---KVIDASLASQIRKLGLSL 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PROM5 (ATP synthase subunit delta OS=Prochlorococcus marinus (strain MIT 9515) GN=atpH PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.243e-17
Identity = 50/177 (28.25%), Postives = 95/177 (53.67%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            +V T YA AL+ +   N+  E    +V+++  + ++  ++ +   +P ++ E KR+++ EI        L  NFL +L D +R+ +V  I+  F E++ + +N  +A V+S V+L  +    I K++  + G + + + T IDPSL+ GF    G    K+ID S+  Q+ ++   L
Sbjct:    6 SVTTPYAEALLQVVNENDQTEEMVNEVKQLLTLINDAPELEKTLSSPVLETETKRKIIIEIFSDRINSSLL-NFLKLLADRQRIGIVTSILNRFLEIHRENSNIALATVTSAVELTDDQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGS---KVIDASLASQIRKLGLSL 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PROM2 (ATP synthase subunit delta OS=Prochlorococcus marinus (strain MIT 9215) GN=atpH PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.243e-17
Identity = 48/177 (27.12%), Postives = 98/177 (55.37%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            +V T YA AL+ +   N   E   ++V+++ ++ ++  ++ +   +P ++ + K++++ EI  +     L  NFL +L D +R+ ++  I++ F E+Y + +N  +A V+S V+L  E    I +++  + G + + + T IDPSL+ GF    G    K+ID S+  Q+ ++   L
Sbjct:    6 SVTTPYAEALLQVVNENLQTEEMVSEVKQLLELINDSPELEKALSSPILETDAKKKIIIEIFSNKVNSSLM-NFLKLLADRQRIGILTSILERFLEIYRENSNIALATVTSAVELTDEQKGLITQKIINIAGTEKLELVTKIDPSLIGGFVASVGS---KVIDASLASQIRKLGLSL 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_THEEB (ATP synthase subunit delta OS=Thermosynechococcus elongatus (strain BP-1) GN=atpH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.207e-16
Identity = 48/176 (27.27%), Postives = 94/176 (53.41%), Query Frame = -3
Query:  149 VATXYAIALVDLAKANNTLESTSADVE-KIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 673
            V   YA AL+ LA+ +N ++    D +  +E + S  ++ +F  NP I  E K+ ++ ++     +     NFL +L+D +R++ +  I + +  +  K+ N  +A V+S V+L  +    + ++V+ +TGA +V + T  DP L+ G  I+ G    ++ D S++ QL  ++  L
Sbjct:   10 VVEPYAEALLSLAQTHNLIDQFQQDTQLMVELVASSGELQQFLANPLIKPEAKKNVLRQLTVDK-VHGYFLNFLMLLVDRRRINFLSSICEHYRALVRKLRNVALAEVTSAVELNDDQRRAVVEKVKTMTGAADVELVTACDPELIGGVVIKVGS---QIFDASLRGQLRRLSVTL 181          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_DESAP (ATP synthase subunit delta OS=Desulforudis audaxviator (strain MP104C) GN=atpH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.207e-16
Identity = 53/176 (30.11%), Postives = 94/176 (53.41%), Query Frame = -3
Query:  161 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSE-KQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEI 685
            +   VA  YA AL D+A+ NN +  T  ++    ++  E + + +   NP + +E K+E+V E      L   T NFL +++D +R   +K I   F  + N+  N   A V+S ++L   H   + + + ++TG K +RI+  +DP ++ G  +R G    ++ID S+K+QLE +
Sbjct:    2 IKGAVAARYAQALFDVARDNNRIAETENELRGFMRLLDESRDLQQVLYNPQVPVELKKEIVRE-AFGKELSGTTLNFLCLVLDRRREVYLKGIADHFIALANETRNIIEAEVTSALELSVVHKVNLMQVLSRMTG-KELRIRYQVDPDIIGGLVVRLGD---RIIDGSIKRQLERL 172          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_ANAVT (ATP synthase subunit delta OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=atpH PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.207e-16
Identity = 50/176 (28.41%), Postives = 97/176 (55.11%), Query Frame = -3
Query:  149 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSE-KQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 673
            VA  YA AL+ +AK+ +  E    D   +  + +E +Q+  F  NP I  E K+ ++ +I   ++  P   NFL +L+D +R+  +++I++++  +  ++  T +A V+S V L  +    + ++V  LT A+ V + T +D  L+ G  I+ G    ++ID S++ QL  ++ +L
Sbjct:   10 VAQPYAQALLSIAKSKSLTEEFGTDARTLLNLLAENQQLRNFIDNPFIAAENKKALIKQILSEAS--PYLRNFLLLLVDKRRIFFLEEILQQYLALLRQLNQTVLAEVTSAVALTEDQQQAVKEKVLALTKARQVELATKVDSDLIGGVIIKVGS---QVIDSSIRGQLRRLSLRL 180          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_GEOSM (ATP synthase subunit delta OS=Geobacter sp. (strain M21) GN=atpH PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.577e-16
Identity = 54/179 (30.17%), Postives = 93/179 (51.96%), Query Frame = -3
Query:  140 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSE-KQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLG 673
            +A  YA ALV L     T++S + ++++   + +E + +   F NP   IE KRE++ E+     L P+  N L +L++  R+ V+ +I + +    ++++      +SS + LE+  + +I   + K TG K V +K  +DPSL+ G      K G K+ D SV+ QL  I   L  G
Sbjct:    6 IAKRYAKALVQLGSEAGTVDSFNTELDRFSALLTESRDLSAVFANPAYGIESKREVMKELVAKLQLSPMISNLLMLLLERGRISVLPEISQSYGAFADELSGVIRPTLSSGLPLEAGQIEEIRSALAKSTG-KKVELKVEVDPSLIGGVVT---KIGGKVFDGSVRTQLARIQDILQKG 180          
The following BLAST results are available for this feature:
BLAST of EY755839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
ATPD_BACAA7.077e-1731.25ATP synthase subunit delta OS=Bacillus anthracis (... [more]
ATPD_SYNP29.243e-1730.60ATP synthase subunit delta OS=Synechococcus sp. (s... [more]
ATPD_SYNJA9.243e-1730.00ATP synthase subunit delta OS=Synechococcus sp. (s... [more]
ATPD_PROMP9.243e-1727.68ATP synthase subunit delta OS=Prochlorococcus mari... [more]
ATPD_PROM59.243e-1728.25ATP synthase subunit delta OS=Prochlorococcus mari... [more]
ATPD_PROM29.243e-1727.12ATP synthase subunit delta OS=Prochlorococcus mari... [more]
ATPD_THEEB1.207e-1627.27ATP synthase subunit delta OS=Thermosynechococcus ... [more]
ATPD_DESAP1.207e-1630.11ATP synthase subunit delta OS=Desulforudis audaxvi... [more]
ATPD_ANAVT1.207e-1628.41ATP synthase subunit delta OS=Anabaena variabilis ... [more]
ATPD_GEOSM1.577e-1630.17ATP synthase subunit delta OS=Geobacter sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-D11-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755839 ID=EY755839; Name=EY755839; organism=Citrus sinensis; type=EST; length=909bp
TTTTTTTTTTTTTTTTTTTTCCTTAACAAATAAAAATGTTTTACAAACAA
ACTTCAATCAAATTATACAAAACCAAATTCAGAAAACGAAAAAAAAAAAA
ATTCCTTCAAAAATCATATCATACAGCAAGTTGGACATCACCCAAATCAA
GCTGAGCAGCGATCTCCTCCAACTGTTTCTTGACACTCATATCAATCAAC
TTAAACCCCCACTTCCCATACCGGATCGTAAAACCCGCCACCAAGCTCGG
GTCAATCACGGTCTTTATCCTCACATTCTTGGCCCCAGTCAACTTCTGGA
CTTGCTTCGCTATCTGAGCCAAATGCTCCGACTCCAGCTTCACCACCGAG
CTCACCACCGCCATCTCCGTATTCGTCATCTTATTATACACCTCCTCGAA
CTCCTTCACTATGTCCTTCACCACGTCCACCCTCTTCGCGTCGATCAGTA
TGTTCAAGAAATTCCCGGTCAGCGGCTGCAGCGCCGACGACTTGCATATC
TCGTCCACCATCTCTCTTTTCTTCTCGATATCGATGGTGGGGTTCACGAA
GAACTCATGGATTTGTTTCTCGCTGAAGATTTTCTCGATCTTTTCCACGT
CGGCGCTCGTGGACTCGAGGGTGTTGTTCGCTTTCGCCAAGTCCACCAGC
GCGATGGCGTANCTGGTCGCCACTGTGGCTGACATTCTGATTCCGTGGGC
GCCCCCCCNGCGTGGGCCGGAAGGGATGTTGGCCGATAATGGGTTTCGAG
AGGCCCCCCGNNCGNAGGGAANAGTTTGATTGNATTGAAAGGGTTCCGGT
TGCTAAAAAACCCCCTTTTCCGATGAAACCCTTATCTGATCTGAGCAACG
CTTAGCTAAGCTGCTCTTTGCTGCCCAAAAAGAGCCGAAGAAAGAGTATC
AAGACGGGG
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