EY755839

Overview
NameEY755839
Unique NameEY755839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_STAAB (ATP synthase subunit delta OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=atpH PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.335e-15
Identity = 51/173 (29.48%), Postives = 90/173 (52.02%), Query Frame = -3
Query:  161 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK--QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEI 673
            VA  YA AL D++   N LE+ + ++  I +   +K  Q+     NPT   E++RE+++ +     + P   N + +L D + + ++ D+ K F+ +YN   N + A + S  +L  E L +I K V + T    V + T I+P L+ GF +   K G  ++D SV+  L ++
Sbjct:    4 VANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEQLKMVDSNPTQTAEQRRELINGVFID--INPYIKNMMYVLADNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRV---KVGTTVLDGSVRNDLVQL 171          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PAUCH (ATP synthase subunit delta, organellar chromatophore OS=Paulinella chromatophora GN=atpD PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.335e-15
Identity = 48/177 (27.12%), Postives = 95/177 (53.67%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIF-SEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            ++AT Y+ AL+ +A+A    E T+  V+++ +I+ S  ++     +  ++ E K+  + ++  S  L P   N L +L D KR+  ++ ++  F E+Y  +    +A V+S + L  E    + K++Q + G  NV +K ++DPS++ GF +  G    ++ID S+  Q+  +   L
Sbjct:    6 SIATPYSEALLQVAEARGESEQTANQVKELLQIWESSPELRNAMTSQVLEPEAKKAALMKLF-SEQLTPAFTNLLKLLADRKRISALEAVLLRFLELYRDIHRIALAEVTSAIPLNEEQKELLRKKIQVVAGTNNVELKLLVDPSMIGGFIVSVGS---QVIDASLAGQVRRLGLAL 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_CLOPD (ATP synthase subunit delta, sodium ion specific OS=Clostridium paradoxum GN=atpH PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.973e-15
Identity = 51/180 (28.33%), Postives = 99/180 (55.00%), Query Frame = -3
Query:  149 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQ-IHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 685
            M+  VAT YA A+ ++    N  E    +++ I   F E +   +    P +  ++K+E+++ I K  A   +  NFL +LID  R+ ++++IV  ++++ N+  N   A+  + V +  E L ++  ++ + T  KNV++K  +DP+++ G  +   K G + ID +VK +LE++  QL
Sbjct:    1 MAKLVATRYASAIFEVGVELNKEEMFYEELKIISSNFEENEKFFKMLKTPILSKQEKKELIENIYKDKASLEIV-NFLKVLIDKDRISIIREIVDIYKQLLNENKNEIQAIAITAVPMSEESLKELTYKLCEKT-KKNVKVKNQVDPTVLGGVLV---KMGNEEIDGTVKTKLEKLKKQL 175          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PELTS (ATP synthase subunit delta OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=atpH PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.651e-15
Identity = 53/187 (28.34%), Postives = 95/187 (50.80%), Query Frame = -3
Query:  149 MSATVATXYAIALVDLAKANNTLESTSADVEKIEK--------IFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 685
            +   VA  YA AL ++A     L    + V+++E+        I     + +   +P I  E+K++++ ++ K   +  +T NFL +L+D +R     +IV EF ++ N   N   A V+S V+L  +    + + + +LTG K V+    +DPSL+ G  +R G    K+ID S+K +L  +  +L
Sbjct:    2 LRGAVAVRYAEALYEIASREKVLPKYKSMVDRVEEELKAVDKVIRENSDLQKLLYHPRITAEEKKDLLQKLFKGK-ISDVTANFLALLVDRRRETFFGEIVAEFVKLANAGRNIITAQVTSAVELNDQEKGDLNRILVRLTG-KKVKTSYAVDPSLIGGVVVRMGD---KIIDGSLKTRLASLKERL 183          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_GRAFK (ATP synthase subunit delta OS=Gramella forsetii (strain KT0803) GN=atpH PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.476e-14
Identity = 50/175 (28.57%), Postives = 95/175 (54.29%), Query Frame = -3
Query:  149 ATXYAIALVDLAKANNTLESTSADVEKIEK-IFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 670
            A  YA A++ LAK  N+ E+ + D+  I K + + + +     +P I    K+  + EI K   L  +T   ++IL++  R+ ++  + +++   +N++ N   AVV++ V L+ E  A I  +V++LTG++   +K+VID  ++ GF +R G   +   D SV + L  +  +L
Sbjct:    7 AQRYAKAILSLAKDKNSAEAVNEDMISISKTVVNSRDLENMLTSPVIKDSTKKSALLEIFKD--LNTITKGAIDILLENGRIGILHLVARQYIIKFNELNNVRQAVVTTAVPLDKELEAVILSKVKELTGSE-ASLKSVIDEDIIGGFVLRVGDLQY---DASVSRNLRRLEREL 175          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_CYAPA (ATP synthase subunit delta, cyanelle OS=Cyanophora paradoxa GN=atpD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.476e-14
Identity = 51/181 (28.18%), Postives = 94/181 (51.93%), Query Frame = -3
Query:  134 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLGDV 673
            +   YA AL+++A+  + +E+ + D+  I        ++ +F  NP +    K+   ++   +  + P T  FL ++ID  R+  ++ I ++++ +  K+T TE+A V + V L SE  A +   +++LT A  V++   ID +L+ GF I  G    K++D S+  QL  I   L L  V
Sbjct:   10 ITQPYAEALLEMAQKYDIVETVNNDITLILNCLQNSTKLQQFLANPLVKKSSKKNFFEKTL-AKEIHPYTFKFLLLVIDRGRISCLEIIAQKYQSLILKLTKTELAEVVTAVPLSSEQEAALNNIIKELTNANEVKLVFKIDQNLIGGFIINIGS---KVVDASLLGQLLRIGNYLGLETV 186          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_BACHD (ATP synthase subunit delta OS=Bacillus halodurans GN=atpH PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.476e-14
Identity = 49/179 (27.37%), Postives = 95/179 (53.07%), Query Frame = -3
Query:  140 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLG 673
            VA  YA+AL +LA+     ES  +++E I+ +F +  ++ +F  +P  ++ +KRE++++  K      +  N L +L++ KR+D++  +V++F+ +         A V S   L      Q++    K  G   + I+ ++DPS++ G  IR G    ++ D S+K QL+ +  +L  G
Sbjct:    6 VANRYAVALFELAQEKGLHESFVSELELIKAVFQDTPELMQFLTHPKTELTQKRELLEKTFKGKVNDTIF-NTLVVLVERKRIDLIIPVVQKFKSLSYDAQKIAEAFVYSAKPLSEAEKDQLSVLFAKKVGKAKLLIENIVDPSIIGGLKIRIGD---RIYDGSIKGQLDVLHRELVSG 180          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SYNR3 (ATP synthase subunit delta OS=Synechococcus sp. (strain RCC307) GN=atpH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.927e-14
Identity = 43/177 (24.29%), Postives = 96/177 (54.24%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQ-IHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            T+AT YA AL+ + ++    ++ + + + +   +S  Q + +   +P + +E K++ +D +  S ++ P   N L +L D +R+ ++  +++ F E+Y ++    +A V+S   L  +   ++ ++V+ + G   V I   +DP L+ GF +R G    ++ID S++ Q+ ++   L
Sbjct:    6 TLATPYADALLQVGESRKQSDALADEAKALLSAWSSSQDLQDAMRSPVLSVEGKKKALDSLF-SESISPAMLNLLKLLADRQRIGMLDAVLERFLELYRELRGITLAYVTSATALSEQQQDKLTEKVKTVAGTTAVDIDLSVDPDLIGGFVVRLGS---QVIDASLRGQVRQLGLSL 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PELPD (ATP synthase subunit delta OS=Pelobacter propionicus (strain DSM 2379) GN=atpH1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.517e-14
Identity = 50/183 (27.32%), Postives = 96/183 (52.46%), Query Frame = -3
Query:  140 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIF-SEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLG 685
            +++T+A  YA++LV L      ++    ++  +E +F +  +I   F +P +  E+K+ ++ E+  S A   L GNFL +L+D  RV     IVK + ++ ++       V+++  +L++  LA I + ++K   AK +  +  +D + + G  ++ G     + D SVK QL+ I  QL  G
Sbjct:    2 INSTIAKRYALSLVQLGAECGLVDRFRGELADVEDLFGTTPEIPAAFADPALSHERKKNIMRELVGSCACSELMGNFLLLLVDKNRVAFFSQIVKAYGQLADEHVGILRPVITTAFELDAVQLAAIREALEK-KSAKTIIPQLTVDKAFLGGVVVQIGD---TVYDSSVKTQLKRIQDQLQKG 180          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SYNP1 (ATP synthase subunit delta OS=Synechococcus sp. (strain PCC 6716) GN=atpH PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.287e-14
Identity = 46/172 (26.74%), Postives = 94/172 (54.65%), Query Frame = -3
Query:  149 YAIALVDLAKANNTLESTSADVEKI-EKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 661
            YA AL+ LA+++N  +    D   I + + +  ++ EF  NP I+ + K+ ++ ++     +     NFL +L+D +R++++  I +++  +  K+ N  +A V S V+L  +    + ++V+ +TGA +V +   IDP L+ G  I+ G    ++ D S++ QL  ++  L
Sbjct:   13 YAEALLSLAQSHNLADQFQQDSGLILDLLAASAELQEFLANPLINPDAKKNVLRQLTVDK-VHGYFLNFLMLLVDRRRINLLAAICQQYRALLRKLRNIVLAEVISAVELTEQQRHAVVEKVKTMTGAADVELAIAIDPELLGGVVIKVGS---QIFDASLRGQLRRLSVSL 180          
The following BLAST results are available for this feature:
BLAST of EY755839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
ATPD_STAAB1.335e-1529.48ATP synthase subunit delta OS=Staphylococcus aureu... [more]
ATPD_PAUCH1.335e-1527.12ATP synthase subunit delta, organellar chromatopho... [more]
ATPD_CLOPD2.973e-1528.33ATP synthase subunit delta, sodium ion specific OS... [more]
ATPD_PELTS8.651e-1528.34ATP synthase subunit delta OS=Pelotomaculum thermo... [more]
ATPD_GRAFK1.476e-1428.57ATP synthase subunit delta OS=Gramella forsetii (s... [more]
ATPD_CYAPA1.476e-1428.18ATP synthase subunit delta, cyanelle OS=Cyanophora... [more]
ATPD_BACHD1.476e-1427.37ATP synthase subunit delta OS=Bacillus halodurans ... [more]
ATPD_SYNR31.927e-1424.29ATP synthase subunit delta OS=Synechococcus sp. (s... [more]
ATPD_PELPD2.517e-1427.32ATP synthase subunit delta OS=Pelobacter propionic... [more]
ATPD_SYNP13.287e-1426.74ATP synthase subunit delta OS=Synechococcus sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-D11-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755839 ID=EY755839; Name=EY755839; organism=Citrus sinensis; type=EST; length=909bp
TTTTTTTTTTTTTTTTTTTTCCTTAACAAATAAAAATGTTTTACAAACAA
ACTTCAATCAAATTATACAAAACCAAATTCAGAAAACGAAAAAAAAAAAA
ATTCCTTCAAAAATCATATCATACAGCAAGTTGGACATCACCCAAATCAA
GCTGAGCAGCGATCTCCTCCAACTGTTTCTTGACACTCATATCAATCAAC
TTAAACCCCCACTTCCCATACCGGATCGTAAAACCCGCCACCAAGCTCGG
GTCAATCACGGTCTTTATCCTCACATTCTTGGCCCCAGTCAACTTCTGGA
CTTGCTTCGCTATCTGAGCCAAATGCTCCGACTCCAGCTTCACCACCGAG
CTCACCACCGCCATCTCCGTATTCGTCATCTTATTATACACCTCCTCGAA
CTCCTTCACTATGTCCTTCACCACGTCCACCCTCTTCGCGTCGATCAGTA
TGTTCAAGAAATTCCCGGTCAGCGGCTGCAGCGCCGACGACTTGCATATC
TCGTCCACCATCTCTCTTTTCTTCTCGATATCGATGGTGGGGTTCACGAA
GAACTCATGGATTTGTTTCTCGCTGAAGATTTTCTCGATCTTTTCCACGT
CGGCGCTCGTGGACTCGAGGGTGTTGTTCGCTTTCGCCAAGTCCACCAGC
GCGATGGCGTANCTGGTCGCCACTGTGGCTGACATTCTGATTCCGTGGGC
GCCCCCCCNGCGTGGGCCGGAAGGGATGTTGGCCGATAATGGGTTTCGAG
AGGCCCCCCGNNCGNAGGGAANAGTTTGATTGNATTGAAAGGGTTCCGGT
TGCTAAAAAACCCCCTTTTCCGATGAAACCCTTATCTGATCTGAGCAACG
CTTAGCTAAGCTGCTCTTTGCTGCCCAAAAAGAGCCGAAGAAAGAGTATC
AAGACGGGG
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