EY755839

Overview
NameEY755839
Unique NameEY755839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SYNP6 (ATP synthase subunit delta OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpH PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14
Identity = 49/172 (28.49%), Postives = 90/172 (52.33%), Query Frame = -3
Query:  149 YAIALVDLAKANNTLESTSADVEKIEK-IFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 661
            YA AL+ +A+     +    D       + +   +     NPT+   +K+ +++++  SS + PL  NFLN+L+D  R+  +  I   ++ +  K+ N   A VSS V L    +  I ++V++LTGA  V I++ +D  L+ G  I+ G    +++D S++ QL+ I+  L
Sbjct:   11 YAEALMAIAREQGLEDRFGEDAALFRSTLAASADLRHLLENPTLFSSQKKAVLNQVFGSS-VHPLVLNFLNLLVDRNRIAFLDGIADRYQALLRKLRNVVRADVSSAVPLTEAQVQVITEKVKQLTGAAGVEIESQVDADLLGGVIIKVGS---QVLDASLRGQLKRISISL 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SYNE7 (ATP synthase subunit delta OS=Synechococcus elongatus (strain PCC 7942) GN=atpH PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14
Identity = 49/172 (28.49%), Postives = 90/172 (52.33%), Query Frame = -3
Query:  149 YAIALVDLAKANNTLESTSADVEKIEK-IFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 661
            YA AL+ +A+     +    D       + +   +     NPT+   +K+ +++++  SS + PL  NFLN+L+D  R+  +  I   ++ +  K+ N   A VSS V L    +  I ++V++LTGA  V I++ +D  L+ G  I+ G    +++D S++ QL+ I+  L
Sbjct:   11 YAEALMAIAREQGLEDRFGEDAALFRSTLAASADLRHLLENPTLFSSQKKAVLNQVFGSS-VHPLVLNFLNLLVDRNRIAFLDGIADRYQALLRKLRNVVRADVSSAVPLTEAQVQVITEKVKQLTGAAGVEIESQVDADLLGGVIIKVGS---QVLDASLRGQLKRISISL 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_GEOSF (ATP synthase subunit delta OS=Geobacter sp. (strain FRC-32) GN=atpH PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.608e-14
Identity = 51/179 (28.49%), Postives = 85/179 (47.49%), Query Frame = -3
Query:  140 VATXYAIALVDLAKANNTLESTSADVEKIEKIFS-EKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLG 673
            +A  YA ALV +      ++  S ++ +   + +    +   F NP   IE K+E++ EI     L     NFL +L+D  R+  +  IV+ F    + ++      ++S + LE   + +I   + K TG K V +K  +DPSL+ G   + G    K+ D S+K QL +I   L  G
Sbjct:    6 IAKRYAKALVQIGAEEGNVDKFSGELSQFTGVLAGSTSLTAVFSNPAYGIEAKKEILKEIMTKLGLSNNVANFLQLLLDRNRLPFLPQIVESFNSFADDLSGVIRPTLTSGLPLEQSQIDEIKNSLTKATG-KKVVLKVEVDPSLIGGVVTKIGD---KVFDGSIKTQLAKIQDILQKG 180          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SOLUE (ATP synthase subunit delta OS=Solibacter usitatus (strain Ellin6076) GN=atpH PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 48/181 (26.52%), Postives = 94/181 (51.93%), Query Frame = -3
Query:  149 ATVATXYAIALVDLAKANNTLESTSADVEKIEK----IFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 679
            + VAT YA AL D+    ++     A +E++      + S  ++H    +P++ + +KR +V  I  +  + P+  NFL +L+D +R+  + +I+  FE + ++      A +SS  +L       ++ Q+ +LTG K +R++  +D +L+ G   R G     + D SV+ QL+ +  +L
Sbjct:    4 SAVATRYANALADVVSPGSSPIRPEAALEELRAFEAALKSSVELHNALTSPSVPVGRKRAVVGRISDTLKISPIVRNFLFVLVDHRRIASLTEILHSFELIMDERLGFARAEISSARELTEPQRTALSAQLAQLTG-KQIRMRFAVDEALIGGAVARIGS---TVYDGSVRGQLQTLERRL 180          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PHATR (ATP synthase subunit delta, chloroplastic OS=Phaeodactylum tricornutum GN=atpD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 45/181 (24.86%), Postives = 96/181 (53.04%), Query Frame = -3
Query:  146 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLD 685
            ++  +A+ YA AL D +   N +   +AD + +E    E  ++ E+  NP +    K E++ +  ++  L   T  FL IL++  R+ ++  ++  + E+  +  + +   VS+  +  +     + +++++L  A+ +R+   +DP+L+ GF I   K   K+ID ++K QL+++A  LD
Sbjct:    6 LTLKIASPYARALFDFSVEKNIMHQITADFQNLEIFLKENTELTEYLDNPVVSKNAKCEILAKTLQAQ-LNDETLKFLMILVERGRISLLTSVITIYLELVYETASIKTIEVSTAFEFTTSQKTILVQKLKELMNAREIRLMITVDPNLIGGFLI---KTQSKVIDFTIKNQLQKLAKHLD 182          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_CLOTH (ATP synthase subunit delta OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=atpH PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 47/169 (27.81%), Postives = 94/169 (55.62%), Query Frame = -3
Query:  170 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSE-KQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQL 673
            V T YA AL+D+ +  N+ +    ++ ++ K+  E ++ + F ++P I  E ++E + ++ +    Q +  NFL +L+D +R + ++ IV+E+  + ++  N     + S   LE   + +I ++ +KL    +V+ K +ID SL+ G  I+ G    K+ID S+K +L
Sbjct:    4 VNTRYAEALIDVTEEKNSTDKVLNNLVQVLKLLEENREFYSFLLDPQIQKESRKEAIIKVFEGRIEQEVV-NFLMLLVDKERFENIRGIVEEYFRLADERKNILNMTIISAFPLEDVQINRIKEKYKKLYNKTDVKAKLIIDKSLIGGVKIQIGD---KVIDDSIKGRL 168          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_COXBN (ATP synthase subunit delta OS=Coxiella burnetii (strain Dugway 5J108-111) GN=atpH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.565e-14
Identity = 54/182 (29.67%), Postives = 93/182 (51.10%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKS------SALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            T+A  YA A     +  N LE+  A      KI   K++    +NP    ++ + ++ ++ ++        L+    +FL +LID KR+ ++ DI   ++++ NK  +   A V+ V  L  EH  QI KQ++K   A+ V++K + D SL+ G  IR G W   ++D S+K +L  +A  L
Sbjct:    6 TLARPYAKAAFADGQKANQLEAWLAVFTAFSKIIKNKEVARQIINPKFSDKEIKTLLFDLIQTIEPESTKQLKDKIDHFLQLLIDEKRLMILPDIALVYQQLLNKYQDIIEASVTYVFPLNDEHRQQIQKQLEKRFNAE-VKLKMIKDESLLGGVIIRAGNW---VMDGSIKGKLTRLAENL 183          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_COXB1 (ATP synthase subunit delta OS=Coxiella burnetii (strain CbuK_Q154) GN=atpH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.565e-14
Identity = 54/182 (29.67%), Postives = 93/182 (51.10%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKS------SALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            T+A  YA A     +  N LE+  A      KI   K++    +NP    ++ + ++ ++ ++        L+    +FL +LID KR+ ++ DI   ++++ NK  +   A V+ V  L  EH  QI KQ++K   A+ V++K + D SL+ G  IR G W   ++D S+K +L  +A  L
Sbjct:    6 TLARPYAKAAFADGQKANQLEAWLAVFTAFSKIIKNKEVARQIINPKFSDKEIKTLLFDLIQTIEPESTKQLKDKIDHFLQLLIDEKRLMILPDIALVYQQLLNKYQDIIEASVTYVFPLNDEHRQQIQKQLEKRFNAE-VKLKMIKDESLLGGVIIRAGNW---VMDGSIKGKLTRLAENL 183          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_COXBU (ATP synthase subunit delta OS=Coxiella burnetii GN=atpH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.249e-13
Identity = 54/182 (29.67%), Postives = 92/182 (50.55%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKS------SALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            T+A  YA A     +  N LE+  A      KI   K++    +NP    ++ + ++ ++ ++        L+    +FL +LID KR+ ++ DI   ++++ NK      A V+ V  L  EH  QI KQ++K   A+ V++K + D SL+ G  IR G W   ++D S+K +L  +A  L
Sbjct:    6 TLARPYAKAAFADGQKANQLEAWLAVFTAFSKIIKNKEVARQIINPKFSDKEIKTLLFDLIQTIEPESTKQLKDKIDHFLQLLIDEKRLMILPDIALVYQQLLNKYQGIIEASVTYVFPLNDEHRQQIQKQLEKRFNAE-VKLKMIKDESLLGGVIIRAGNW---VMDGSIKGKLTRLAENL 183          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_COXBR (ATP synthase subunit delta OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=atpH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.249e-13
Identity = 54/182 (29.67%), Postives = 92/182 (50.55%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKS------SALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            T+A  YA A     +  N LE+  A      KI   K++    +NP    ++ + ++ ++ ++        L+    +FL +LID KR+ ++ DI   ++++ NK      A V+ V  L  EH  QI KQ++K   A+ V++K + D SL+ G  IR G W   ++D S+K +L  +A  L
Sbjct:    6 TLARPYAKAAFADGQKANQLEAWLAVFTAFSKIIKNKEVARQIINPKFSDKEIKTLLFDLIQTIEPESTKQLKDKIDHFLQLLIDEKRLMILPDIALVYQQLLNKYQGIIEASVTYVFPLNDEHRQQIQKQLEKRFNAE-VKLKMIKDESLLGGVIIRAGNW---VMDGSIKGKLTRLAENL 183          
The following BLAST results are available for this feature:
BLAST of EY755839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
ATPD_SYNP64.294e-1428.49ATP synthase subunit delta OS=Synechococcus sp. (s... [more]
ATPD_SYNE74.294e-1428.49ATP synthase subunit delta OS=Synechococcus elonga... [more]
ATPD_GEOSF5.608e-1428.49ATP synthase subunit delta OS=Geobacter sp. (strai... [more]
ATPD_SOLUE7.324e-1426.52ATP synthase subunit delta OS=Solibacter usitatus ... [more]
ATPD_PHATR7.324e-1424.86ATP synthase subunit delta, chloroplastic OS=Phaeo... [more]
ATPD_CLOTH7.324e-1427.81ATP synthase subunit delta OS=Clostridium thermoce... [more]
ATPD_COXBN9.565e-1429.67ATP synthase subunit delta OS=Coxiella burnetii (s... [more]
ATPD_COXB19.565e-1429.67ATP synthase subunit delta OS=Coxiella burnetii (s... [more]
ATPD_COXBU1.249e-1329.67ATP synthase subunit delta OS=Coxiella burnetii GN... [more]
ATPD_COXBR1.249e-1329.67ATP synthase subunit delta OS=Coxiella burnetii (s... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-D11-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755839 ID=EY755839; Name=EY755839; organism=Citrus sinensis; type=EST; length=909bp
TTTTTTTTTTTTTTTTTTTTCCTTAACAAATAAAAATGTTTTACAAACAA
ACTTCAATCAAATTATACAAAACCAAATTCAGAAAACGAAAAAAAAAAAA
ATTCCTTCAAAAATCATATCATACAGCAAGTTGGACATCACCCAAATCAA
GCTGAGCAGCGATCTCCTCCAACTGTTTCTTGACACTCATATCAATCAAC
TTAAACCCCCACTTCCCATACCGGATCGTAAAACCCGCCACCAAGCTCGG
GTCAATCACGGTCTTTATCCTCACATTCTTGGCCCCAGTCAACTTCTGGA
CTTGCTTCGCTATCTGAGCCAAATGCTCCGACTCCAGCTTCACCACCGAG
CTCACCACCGCCATCTCCGTATTCGTCATCTTATTATACACCTCCTCGAA
CTCCTTCACTATGTCCTTCACCACGTCCACCCTCTTCGCGTCGATCAGTA
TGTTCAAGAAATTCCCGGTCAGCGGCTGCAGCGCCGACGACTTGCATATC
TCGTCCACCATCTCTCTTTTCTTCTCGATATCGATGGTGGGGTTCACGAA
GAACTCATGGATTTGTTTCTCGCTGAAGATTTTCTCGATCTTTTCCACGT
CGGCGCTCGTGGACTCGAGGGTGTTGTTCGCTTTCGCCAAGTCCACCAGC
GCGATGGCGTANCTGGTCGCCACTGTGGCTGACATTCTGATTCCGTGGGC
GCCCCCCCNGCGTGGGCCGGAAGGGATGTTGGCCGATAATGGGTTTCGAG
AGGCCCCCCGNNCGNAGGGAANAGTTTGATTGNATTGAAAGGGTTCCGGT
TGCTAAAAAACCCCCTTTTCCGATGAAACCCTTATCTGATCTGAGCAACG
CTTAGCTAAGCTGCTCTTTGCTGCCCAAAAAGAGCCGAAGAAAGAGTATC
AAGACGGGG
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