EY755829

Overview
NameEY755829
Unique NameEY755829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHOF_HUMAN (Rho-related GTP-binding protein RhoF OS=Homo sapiens GN=RHOF PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.844e-27
Identity = 63/155 (40.65%), Postives = 94/155 (60.65%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            Y+Q  FP     +    ++A+V V    V L L+DTAGQEDY+RLRPLSY+   + ++ + +++  SY+NV  KW PE+ H+  G+P++L+G K DLR DK+       A   PI+  QG    + I A  Y+ECS+K ++NV+ VF  A +V L
Sbjct:   39 YSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYMQGLSACEQIRAALYLECSAKFRENVEDVFREAAKVAL 193          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RACG_DICDI (Rho-related protein racG OS=Dictyostelium discoideum GN=racG PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 8.174e-27
Identity = 60/134 (44.78%), Postives = 86/134 (64.18%), Query Frame = -2
Query:  289 FSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 684
            +S  ++ N    NL LWDTAGQE++++LR LSY   DVF+L FSLI+ +S+ N+   W+ EL    P  PI+LVGT++DL+ +      +     +PIST QG EL K I A  ++ECS+ TQ+N+  VF+ AI
Sbjct:   40 YSTLLMHNKKPYNLSLWDTAGQEEFSKLRRLSYPQTDVFLLCFSLINPSSFSNILDSWVQELNENCPNTPIVLVGTQMDLKSNSVILDRLCEKKQLPISTQQGIELSKKINAFDFVECSALTQKNLHLVFEKAI 173          

HSP 2 Score: 23.483 bits (49), Expect = 8.174e-27
Identity = 10/24 (41.67%), Postives = 14/24 (58.33%), Query Frame = -3
Query:  687 G*TCLXIFTPSNTFPTDYVPTVFD 758
            G T + +   SN+   +Y PTVFD
Sbjct:   15 GKTSMLLSYTSNSISNEYQPTVFD 38          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHOF_MOUSE (Rho-related GTP-binding protein RhoF OS=Mus musculus GN=Rhof PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.439e-26
Identity = 61/155 (39.35%), Postives = 91/155 (58.71%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            Y Q  FP     +    ++A+V V    V L L+DTAGQEDY+RLRPLSY+   + ++ + +++  SY+NV  KW PE+ H+  G+P +L+G K DLR DK+       A   PI+  QG    + +    Y+ECS+K ++NV+ VF  A +V L
Sbjct:   39 YCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPTVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGLNACEQMRGALYLECSAKFRENVEDVFREAAKVAL 193          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO4_YEAST (GTP-binding protein RHO4 OS=Saccharomyces cerevisiae GN=RHO4 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 8.439e-26
Identity = 62/154 (40.26%), Postives = 89/154 (57.79%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            Y Q  FP          +  N+   NG  + L LWDTAGQE+Y+RLRPLSY  ADV ++ +S+ SK S +NV   W PE+KH+ P  PI+LVG K DL +          +  +  +  E L K +GA A+I+CS++ ++N+  VF+ AI  +L
Sbjct:   92 YVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKHFCPSTPIMLVGLKSDLYEADNL------SDLVEPSSAESLAKRLGAFAHIQCSARLKENIDEVFETAIHTLL 239          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: CRL1_CANAL (GTP-binding RHO-like protein OS=Candida albicans GN=CRL1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.880e-25
Identity = 66/150 (44.00%), Postives = 88/150 (58.67%), Query Frame = -2
Query:  289 YTQQHFPYGLCANCV*-YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 735
            YTQ  FP          Y +A    NG TV L LWDTAGQE+Y+RLRPLSY   D+ ++ F++ ++ S ENV   W PE+ HY PG+PIILVGTK DL  D    ++H  ++ ++        K IGA   I  S+KT  NV+ VF+ A+
Sbjct:   95 YTQNKFPSIYVPTVFENYVTAVQSPNGKTVELALWDTAGQEEYDRLRPLSYPDVDILLVCFAVDNEVSLENVKDMWFPEVNHYCPGIPIILVGTKSDLLSD----MNHDASIRVA--------KEIGAIGLIFTSAKTMFNVRTVFNFAL 232          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RACI_DICDI (Rho-related protein racI OS=Dictyostelium discoideum GN=racI PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.592e-24
Identity = 63/159 (39.62%), Postives = 90/159 (56.60%), Query Frame = -2
Query:  274 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGV--PIILVGTKLDLRDDK---QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLH 735
            Y+   FP G   + V   S ++  N    ++G WD++   +++  RP +Y   +V IL FS+ S  S+ENVSKKWIPE++ YAP +  PIIL+GTK DLR+D+       ++    PIS  QG  L K I A  Y+ECSS   Q V  +F   +R  L+
Sbjct:   25 YSTGSFPTGYVPSHVDATSLDIEYNKQVCHVGFWDSSALAEFDNTRPSTYPNTNVIILCFSIDSPTSFENVSKKWIPEIRQYAPSIHTPIILLGTKCDLREDENTINLLKENNQMPPISYKQGLALSKEIKATMYLECSSLCNQGVNEIFKQVVRCHLY 183          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO2_SCHPO (GTP-binding protein rho2 OS=Schizosaccharomyces pombe GN=rho2 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.715e-24
Identity = 66/162 (40.74%), Postives = 88/162 (54.32%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVP---------ISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            +T  +FP          + ++  V+G +V L LWDTAGQE+Y RLRP+SY  A + ++ F++ S  S ENVS KWI E+    P VP ILVG K DLR D       P A+          + + Q E + + IGA  Y+ECSS T   V  VF+AA R  L
Sbjct:   28 FTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSD-------PVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATRAAL 182          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO5_YEAST (GTP-binding protein RHO5 OS=Saccharomyces cerevisiae GN=RHO5 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.298e-23
Identity = 59/139 (42.45%), Postives = 83/139 (59.71%), Query Frame = -2
Query:  268 LGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-----------PGVPIILVGTKLDLRDD--KQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLHPP 645
            + LWDTAGQEDY+RLRPL Y   D+F++ FS+   AS+ NV++KW+PELK  +              PI+LVGTK DLRDD   Q  +    +  +S  + +EL +  G   Y ECS+ TQ  V+ VF+ A+R  ++ P
Sbjct:   83 INLWDTAGQEDYDRLRPLCYPQTDIFLICFSVSEHASFANVTEKWLPELKQTSNIEGTSLYTKLGKYPILLVGTKSDLRDDPATQKKLQEANSDYVSQEEIDELVQRCGFMGYTECSAATQAGVREVFEQAVRYAIYEP 221          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO3_SCHPO (GTP-binding protein rho3 OS=Schizosaccharomyces pombe GN=rho3 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 8.733e-23
Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            +T+ +FP          +  ++ V+G+++ L LWDTAGQE+Y++LR LSY    V ++ F++ S+ S ENV  KW+PE+    PGV ++LV  K DLR   +  +DH  +  I   +G    K I A  Y+ECS+K  + V   F  A RV L
Sbjct:   33 FTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADEEQVDH--SKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVAL 183          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO2_YEAST (GTP-binding protein RHO2 OS=Saccharomyces cerevisiae GN=RHO2 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 3.093e-22
Identity = 57/131 (43.51%), Postives = 77/131 (58.78%), Query Frame = -2
Query:  277 VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPG-AVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 666
            V+G  V+L LWDTAGQE+Y RLRP SY  AD+ ++ F++ +  S  N   KW  E   Y P  PI+LVG K DLR +  F  +     VPI  A  +++ + IGA  Y+ECS+ T + V  VF+ A R  L
Sbjct:   50 VDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQEAHFKENATDEMVPIEDA--KQVARAIGAKKYMECSALTGEGVDDVFEVATRTSL 178          

HSP 2 Score: 23.8682 bits (50), Expect = 3.093e-22
Identity = 11/25 (44.00%), Postives = 12/25 (48.00%), Query Frame = -3
Query:  687 CG*TCLXIFTPSNTFPTDYVPTVFD 761
            CG T L        FP  Y PTVF+
Sbjct:   18 CGKTSLLYVFTLGKFPEQYHPTVFE 42          
The following BLAST results are available for this feature:
BLAST of EY755829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
RHOF_HUMAN5.844e-2740.65Rho-related GTP-binding protein RhoF OS=Homo sapie... [more]
RACG_DICDI8.174e-2744.78Rho-related protein racG OS=Dictyostelium discoide... [more]
RHOF_MOUSE8.439e-2639.35Rho-related GTP-binding protein RhoF OS=Mus muscul... [more]
RHO4_YEAST8.439e-2640.26GTP-binding protein RHO4 OS=Saccharomyces cerevisi... [more]
CRL1_CANAL1.880e-2544.00GTP-binding RHO-like protein OS=Candida albicans G... [more]
RACI_DICDI1.592e-2439.62Rho-related protein racI OS=Dictyostelium discoide... [more]
RHO2_SCHPO2.715e-2440.74GTP-binding protein rho2 OS=Schizosaccharomyces po... [more]
RHO5_YEAST2.298e-2342.45GTP-binding protein RHO5 OS=Saccharomyces cerevisi... [more]
RHO3_SCHPO8.733e-2337.91GTP-binding protein rho3 OS=Schizosaccharomyces po... [more]
RHO2_YEAST3.093e-2243.51GTP-binding protein RHO2 OS=Saccharomyces cerevisi... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-C11-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755829 ID=EY755829; Name=EY755829; organism=Citrus sinensis; type=EST; length=919bp
TTTTTTTTTTTTTTTTTTTTTTTGCAACAATGTAATGCATTTCAACAATT
AGAGCCGATCACAACAATTCCAACAAAACAATACAAAACCACCTGATGAT
TCACAGAGAGATCCTCACAGTTTGTCAATTGAGATTTCTTCCAGAGCAAA
GGAAGAAAGATGAGGGAGAATTTGAGAAAGGACAGAGGGTCATAATCTCT
TTACACCTAATTTCAATCACAATATAGAGCAGGCCTTTTGGGCTTTATTC
TTTTTCTTCTTCGTCTTTGGTGGGTGGAGGACAACTCTGATGGCTGCATC
AAATACTGCCTTCACATTCTGCTGTGTTTTTGAACTGCATTCAATGTAAG
CAGGTGCACCAATCAACTTCCTCAGCTCCTCCCCCTGAGCTGTACTAATG
GGCACGGCACCTGGATGATCAATGAAGAACTGCTTATCATCCCGAAGATC
AAGCTTTGTTCCAACAAGAATTATTGGCACACCAGGTGCATAATGTTTCA
ACTCTGGAATCCACTTCTTGGATACATTTTCATAACTTGCTTTGCTAATA
AGAGAGAATGCAAGAATGAAAACATCTGCACCACGGTAACTTAAAGGTCT
TAATCTGTTATAATCCTCTTGTCCAGCAGTATCCCATAATCCAAGATTAA
CCGTGCTCCCATTGACAACCACATTTGCACTGAAATATCAAACACAGTTG
GCACATAATCCGTAGGGAAAGTGTTGCTGGGTGTAAAAATCANCAAACAA
GTTTACCCACAGNTNCATCGNCTACCGNACGCACTTAATAAACCTGATGC
GCTCATTNNTTTTTTTTTAAGAAGTGGCTTTTTAGTACCAAATATAAACT
TCAGAGAAAAGACAAGCACCCTCAATCCCACACCTGAGAGAACCGGATCG
NAGCGTACTTCATTAGCAT
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