EY755829

Overview
NameEY755829
Unique NameEY755829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RACM_DICDI (Rho-related protein racM OS=Dictyostelium discoideum GN=racM PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.261e-21
Identity = 55/151 (36.42%), Postives = 82/151 (54.30%), Query Frame = -2
Query:  283 FPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRD-----DKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRV 720
            FP       +  F     +NG   +L +WDTAG E Y+ LRPL Y   D+ +L F++ ++ S+ ++   WI E+  Y PG+PIILVGTK+DLRD     DK  F+ +         +G  L K IGA  + ECSS+    ++ +F   I++
Sbjct:   31 FPQEYVPTALDNFIHEATINGKKASLSIWDTAGGEYYHELRPLIYPETDILLLLFAIENRESFLHIKTNWITEINQYIPGIPIILVGTKIDLRDSDLIKDKSNFVKY--------KEGLALSKEIGASHFCECSSRMNLGLEELFKKVIKL 173          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO4_ASHGO (GTP-binding protein RHO4 OS=Ashbya gossypii GN=RHO4 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.174e-21
Identity = 53/155 (34.19%), Postives = 87/155 (56.13%), Query Frame = -2
Query:  274 YTQQHFPYGLCANCV*YFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLH 735
            YTQ  FP          +  N+    G  + L LWDTAGQE+Y+RLRPLSY   D+ ++ ++  ++ S  N  + W PE++H+ P  P++LVG K DL     + +D    + +     E + + +GA  +++CS+KT+Q ++ VF+ AI   L+
Sbjct:   72 YTQGQFPEDYVPTIFENYVTNIEGPRGKVIELALWDTAGQEEYSRLRPLSYGDVDIVMVCYAADNRTSLTNAEELWFPEVRHFCPHAPMMLVGLKSDL-----YSLDALDRL-VDPTDAELVARKMGAFVHLQCSAKTRQCLEDVFNTAIHTALY 220          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: CDC42_COLGL (Cell division control protein 42 homolog OS=Colletotrichum gloeosporioides GN=CDC42 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.821e-20
Identity = 59/156 (37.82%), Postives = 83/156 (53.21%), Query Frame = -2
Query:  268 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLHPP 735
            YT   FP          ++  V++      LGL+DTAGQEDY+RLRPLSY   DVF++ FS+ S AS+ENV++          PGV +++V    +     +  +      P+    GE + K +GA  Y+ECS+ TQ  +K VFD AI   L PP
Sbjct:   25 YTTNKFPSEYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVARSGSRGTSP-LPGV-LLIVAPVTERGSSVREKLSKQKMSPVRKEDGERMAKDLGAVKYVECSALTQFKLKDVFDEAIVAALEPP 178          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RACN_DICDI (Rho-related protein racN OS=Dictyostelium discoideum GN=racN PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.697e-20
Identity = 51/130 (39.23%), Postives = 75/130 (57.69%), Query Frame = -2
Query:  298 VVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRD-----DKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 672
            + +N   + +G WDT G E+Y R  PLSY   ++F++ FS+ S+ S+ N    W+PE+  + P VPIILVGTK DLR+     DK  F+ +         +G E++  I A AY+ECSS   + V  +FD
Sbjct:   45 IKINDQIMRIGCWDTGGGEEYPR--PLSYPQTNLFLILFSISSRNSFNNCETYWLPEVTKFLPSVPIILVGTKTDLRNCDDYKDKSTFVTY--------EEGLEMKDKINASAYLECSSLLNKGVDDLFD 164          

HSP 2 Score: 24.2534 bits (51), Expect = 2.697e-20
Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = -3
Query:  687 FPTDYVPTVFD 719
            FP +Y+PT+FD
Sbjct:   29 FPLEYIPTIFD 39          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO1_ENTHI (Ras-like GTP-binding protein RHO1 OS=Entamoeba histolytica GN=RHO1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.702e-20
Identity = 48/119 (40.34%), Postives = 76/119 (63.87%), Query Frame = -2
Query:  289 LGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAI 645
            L LWDTAGQE+Y+RLRPLSY  +DV +L F++ ++ S++N+S KW PE+KH    + +IL   K+DLR D         +  ++  +G++L + +G  AYIE SS  +  +  VF+ ++
Sbjct:   70 LDLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKH----LYLILQRLKVDLRKDV--------SDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSV 176          

HSP 2 Score: 28.1054 bits (61), Expect = 2.702e-20
Identity = 15/40 (37.50%), Postives = 18/40 (45.00%), Query Frame = -3
Query:  639 G*TCLXIFTPSNTFPTDYVPTVFDISVQMWLSMGARLILD 758
            G TCL +       PT YVPTVF+    +        ILD
Sbjct:   32 GKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILD 71          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO3_SCHCO (GTP-binding protein Rho3 OS=Schizophyllum commune GN=RHO3 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.106e-20
Identity = 57/138 (41.30%), Postives = 79/138 (57.25%), Query Frame = -2
Query:  274 NVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEE---LRKLIGAPAYIECSSKTQQNVKAVF-DAAIRVVLH 675
            ++ ++   V L LWDTAGQE+++RLR LSY    V ++ FS+ +  S ENV  KW+ E+  Y PGV ++LV +K DLRDD    +D        T Q EE   + + I A  Y+ECSSK  + V  VF     RV +H
Sbjct:   57 DLYIDDQLVELSLWDTAGQEEFDRLRSLSYAETHVIMICFSVDNPTSLENVESKWLDEILEYCPGVKLVLVDSKCDLRDDPA-VLDRLQRYGTHTDQYEEGLGVARRIRASRYLECSSKHNRGVNEVFLRGRARVTVH 193          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHOH_MOUSE (Rho-related GTP-binding protein RhoH OS=Mus musculus GN=Rhoh PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.180e-19
Identity = 48/154 (31.17%), Postives = 88/154 (57.14%), Query Frame = -2
Query:  274 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLH 735
            +T + FP             +V ++G  ++LGLWDTAG + +  +RPLSY+ ADV ++ +S+ +  S+ N+  KWI E++   P  P+++V T+ D R+     +    A  I+  +G+ L + + A  Y+ECS+ + + V+ VF+ A+R  ++
Sbjct:   24 FTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWISEIRSNLPCTPVLVVATQTDQRE-----VGPHRASCINAIEGKRLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVN 172          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHOH_BOVIN (Rho-related GTP-binding protein RhoH OS=Bos taurus GN=RHOH PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.542e-19
Identity = 47/154 (30.52%), Postives = 89/154 (57.79%), Query Frame = -2
Query:  274 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLH 735
            +T + FP             +V+++G  ++LGLWDTAG + +  +RPLSY+ ADV ++ +S+ +  S+ N+  KWI E++   P  P+++V T+ D R+     +    A  ++  +G+ L + + A  Y+ECS+ + + V+ VF+ A+R  ++
Sbjct:   24 FTSETFPEAYKPTVYENTGVDVLMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEVRSNLPCTPVLVVATQTDQRE-----VGPHRASCVNAIEGKRLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVN 172          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHOH_HUMAN (Rho-related GTP-binding protein RhoH OS=Homo sapiens GN=RHOH PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.630e-19
Identity = 47/154 (30.52%), Postives = 89/154 (57.79%), Query Frame = -2
Query:  274 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLH 735
            +T + FP             +V ++G  ++LGLWDTAG + +  +RPLSY+ ADV ++ +S+ +  S+ N+  KWI E++   P  P+++V T+ D R+     +    A  ++  +G++L + + A  Y+ECS+ + + V+ VF+ A+R  ++
Sbjct:   24 FTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQRE-----MGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVN 172          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO3_ASHGO (GTP-binding protein RHO3 OS=Ashbya gossypii GN=RHO3 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.434e-19
Identity = 56/168 (33.33%), Postives = 85/168 (50.60%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDH---PGAVP------------ISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            +T+ +FP          +  ++ V+   + L LWDTAGQE+++RLR LSY      +L FS+ S+ S ENV  KW+ E+  +  GV ++LV  K DLR   ++  +    PG++             I   +G  + K IGA  Y+ECS+K  + V   F  A R  L
Sbjct:   35 FTRGYFPKVYEPTVFENYIHDIFVDNQHITLSLWDTAGQEEFDRLRSLSYSDTHTIMLCFSVDSRDSLENVKNKWVSEIADHCEGVKLVLVALKCDLRSSDEYGNESAITPGSIQNQKYNGGGGNGLIPYDEGLAMAKQIGALRYLECSAKMNRGVNEAFTEAARCAL 202          
The following BLAST results are available for this feature:
BLAST of EY755829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
RACM_DICDI1.261e-2136.42Rho-related protein racM OS=Dictyostelium discoide... [more]
RHO4_ASHGO8.174e-2134.19GTP-binding protein RHO4 OS=Ashbya gossypii GN=RHO... [more]
CDC42_COLGL1.821e-2037.82Cell division control protein 42 homolog OS=Collet... [more]
RACN_DICDI2.697e-2039.23Rho-related protein racN OS=Dictyostelium discoide... [more]
RHO1_ENTHI2.702e-2040.34Ras-like GTP-binding protein RHO1 OS=Entamoeba his... [more]
RHO3_SCHCO3.106e-2041.30GTP-binding protein Rho3 OS=Schizophyllum commune ... [more]
RHOH_MOUSE1.180e-1931.17Rho-related GTP-binding protein RhoH OS=Mus muscul... [more]
RHOH_BOVIN1.542e-1930.52Rho-related GTP-binding protein RhoH OS=Bos taurus... [more]
RHOH_HUMAN2.630e-1930.52Rho-related GTP-binding protein RhoH OS=Homo sapie... [more]
RHO3_ASHGO3.434e-1933.33GTP-binding protein RHO3 OS=Ashbya gossypii GN=RHO... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-C11-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755829 ID=EY755829; Name=EY755829; organism=Citrus sinensis; type=EST; length=919bp
TTTTTTTTTTTTTTTTTTTTTTTGCAACAATGTAATGCATTTCAACAATT
AGAGCCGATCACAACAATTCCAACAAAACAATACAAAACCACCTGATGAT
TCACAGAGAGATCCTCACAGTTTGTCAATTGAGATTTCTTCCAGAGCAAA
GGAAGAAAGATGAGGGAGAATTTGAGAAAGGACAGAGGGTCATAATCTCT
TTACACCTAATTTCAATCACAATATAGAGCAGGCCTTTTGGGCTTTATTC
TTTTTCTTCTTCGTCTTTGGTGGGTGGAGGACAACTCTGATGGCTGCATC
AAATACTGCCTTCACATTCTGCTGTGTTTTTGAACTGCATTCAATGTAAG
CAGGTGCACCAATCAACTTCCTCAGCTCCTCCCCCTGAGCTGTACTAATG
GGCACGGCACCTGGATGATCAATGAAGAACTGCTTATCATCCCGAAGATC
AAGCTTTGTTCCAACAAGAATTATTGGCACACCAGGTGCATAATGTTTCA
ACTCTGGAATCCACTTCTTGGATACATTTTCATAACTTGCTTTGCTAATA
AGAGAGAATGCAAGAATGAAAACATCTGCACCACGGTAACTTAAAGGTCT
TAATCTGTTATAATCCTCTTGTCCAGCAGTATCCCATAATCCAAGATTAA
CCGTGCTCCCATTGACAACCACATTTGCACTGAAATATCAAACACAGTTG
GCACATAATCCGTAGGGAAAGTGTTGCTGGGTGTAAAAATCANCAAACAA
GTTTACCCACAGNTNCATCGNCTACCGNACGCACTTAATAAACCTGATGC
GCTCATTNNTTTTTTTTTAAGAAGTGGCTTTTTAGTACCAAATATAAACT
TCAGAGAAAAGACAAGCACCCTCAATCCCACACCTGAGAGAACCGGATCG
NAGCGTACTTCATTAGCAT
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