EY755829

Overview
NameEY755829
Unique NameEY755829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 41/132 (31.06%), Postives = 68/132 (51.52%), Query Frame = -2
Query:  280 VVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 672
            V  N   + L +WDTAGQE Y  +    YRGA  FIL + + ++ S+ N  + W  ++K Y+     +IL G K D+ D++           +ST +G+ L + +G   + E S+K   NVK  F+  + ++
Sbjct:   72 VFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVILAGNKCDMEDER----------VVSTERGQRLGEQLGF-EFFETSAKDNINVKQTFERLVDII 191          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = -2
Query:  280 YTQQHFPYGLCANC-V*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPG-VPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF-DAAIRVV 735
            +TQ  FP G  A   V +    V +NG  V L +WDTAGQE +  +    YR A+  IL + +  + S+  +  +W+ E++ YA   V  +LVG K+DL + ++  +    A   S AQ            Y+E S+K   NV+ +F D A R++
Sbjct:   29 FTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCL-PEWLREIEQYASNKVITVLVGNKIDLAERRE--VSQQRAEEFSEAQD---------MYYLETSAKESDNVEKLFLDLACRLI 171          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = -2
Query:  280 YTQQHFPYGLCANC-V*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPG-VPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF-DAAIRVV 735
            +TQ  FP G  A   V +    V +NG  V L +WDTAGQE +  +    YR A+  IL + +  + S+  +  +W+ E++ YA   V  +LVG K+DL + ++  +    A   S AQ            Y+E S+K   NV+ +F D A R++
Sbjct:   29 FTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCL-PEWLREIEQYASNKVITVLVGNKIDLAERRE--VSQQRAEEFSEAQD---------MYYLETSAKESDNVEKLFLDLACRLI 171          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = -2
Query:  280 YTQQHFPYGLCANC-V*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPG-VPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF-DAAIRVV 735
            +TQ  FP G  A   V +    V +NG  V L +WDTAGQE +  +    YR A+  IL + +  + S+  +  +W+ E++ YA   V  +LVG K+DL + ++  +    A   S AQ            Y+E S+K   NV+ +F D A R++
Sbjct:   29 FTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCL-PEWLREIEQYASNKVITVLVGNKIDLAERRE--VSQQRAEEFSEAQD---------MYYLETSAKESDNVEKLFLDLACRLI 171          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = -2
Query:  295 NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDA 663
            +G T+ L +WDTAGQE +  +    YRGA   I+ + +  + S+ NV K+W+ E+  YA   V  +LVG K DL +++        A+P  TA+       IG P ++E S+K   NV+  F A
Sbjct:   53 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNKSDLTENR--------AIPYETAKA--FADEIGIP-FMETSAKDATNVEQAFMA 164          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RAS2_PHYPO (Ras-like protein 2 OS=Physarum polycephalum GN=RAS-2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 41/137 (29.93%), Postives = 75/137 (54.74%), Query Frame = -2
Query:  280 FSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYE--NVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVV 684
            +   VV++  T  L + DTAGQE+Y+ +R    R    F++ +S+ S++S++  N  ++ I  +K     VP++L G K DL  ++Q          ++T +G+EL +  G P ++E S+K + NV+  F   +R +
Sbjct:   42 YRKQVVIDEETCLLDILDTAGQEEYSAMRDQYMRTGQGFVMVYSITSRSSFDEINAFREQILRVKD-KDTVPMVLAGNKCDLASERQ----------VTTNEGQELARAFGCP-FVETSAKARLNVEECFYGLVREI 166          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RAB31_HUMAN (Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 47/158 (29.75%), Postives = 80/158 (50.63%), Query Frame = -2
Query:  268 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGL-WDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLHPP 735
            + Q HF + +       F    V  G+ ++  L WDTAGQE ++ L P+ YRG+   ++ + +  + S+  + KKW+ ELK + P  + + + G K DL D ++        VP+  A  +E  + IGA   +E S+K   N++ +F    R +  PP
Sbjct:   25 FVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTL-KKWVKELKEHGPENIVMAIAGNKCDLSDIRE--------VPLKDA--KEYAESIGA-IVVETSAKNAINIEELFQGISRQI--PP 168          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RAB26_HUMAN (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = -2
Query:  295 VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDA 666
            V+G  V L +WDTAGQE +  +    YR A   +L + + +KAS++N+ + W+ E+  YA   V ++L+G K+D   ++           +    GE+L K  G P ++E S+KT  NV   F A
Sbjct:  108 VDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEIHEYAQHDVALMLLGNKVDSAHER----------VVKREDGEKLAKEYGLP-FMETSAKTGLNVDLAFTA 220          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 38/125 (30.40%), Postives = 66/125 (52.80%), Query Frame = -2
Query:  301 VVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 672
            V ++ +T+ L +WDTAGQE +  +    YRGA   I  + + +K S++++++ W+ ++  YA   V  +L+G K+DL + +    D    V    A+   +        YIE S+KT  NV+  F
Sbjct:   49 VKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHV----AEQNNMN-------YIEASAKTDSNVEKAF 162          
The following BLAST results are available for this feature:
BLAST of EY755829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
RAB3C_MOUSE5.872e-1131.06Ras-related protein Rab-3C OS=Mus musculus GN=Rab3... [more]
RAB30_MOUSE5.872e-1132.26Ras-related protein Rab-30 OS=Mus musculus GN=Rab3... [more]
RAB30_HUMAN5.872e-1132.26Ras-related protein Rab-30 OS=Homo sapiens GN=RAB3... [more]
RAB30_BOVIN5.872e-1132.26Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 ... [more]
RBD2A_ARATH7.668e-1135.48Ras-related protein RABD2A OS=Arabidopsis thaliana... [more]
RAS2_PHYPO7.668e-1129.93Ras-like protein 2 OS=Physarum polycephalum GN=RAS... [more]
RAB31_HUMAN7.668e-1129.75Ras-related protein Rab-31 OS=Homo sapiens GN=RAB3... [more]
RAB26_HUMAN7.668e-1133.60Ras-related protein Rab-26 OS=Homo sapiens GN=RAB2... [more]
RAB1_THEPA7.668e-1130.40Ras-related protein Rab-1 OS=Theileria parva GN=ra... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-C11-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755829 ID=EY755829; Name=EY755829; organism=Citrus sinensis; type=EST; length=919bp
TTTTTTTTTTTTTTTTTTTTTTTGCAACAATGTAATGCATTTCAACAATT
AGAGCCGATCACAACAATTCCAACAAAACAATACAAAACCACCTGATGAT
TCACAGAGAGATCCTCACAGTTTGTCAATTGAGATTTCTTCCAGAGCAAA
GGAAGAAAGATGAGGGAGAATTTGAGAAAGGACAGAGGGTCATAATCTCT
TTACACCTAATTTCAATCACAATATAGAGCAGGCCTTTTGGGCTTTATTC
TTTTTCTTCTTCGTCTTTGGTGGGTGGAGGACAACTCTGATGGCTGCATC
AAATACTGCCTTCACATTCTGCTGTGTTTTTGAACTGCATTCAATGTAAG
CAGGTGCACCAATCAACTTCCTCAGCTCCTCCCCCTGAGCTGTACTAATG
GGCACGGCACCTGGATGATCAATGAAGAACTGCTTATCATCCCGAAGATC
AAGCTTTGTTCCAACAAGAATTATTGGCACACCAGGTGCATAATGTTTCA
ACTCTGGAATCCACTTCTTGGATACATTTTCATAACTTGCTTTGCTAATA
AGAGAGAATGCAAGAATGAAAACATCTGCACCACGGTAACTTAAAGGTCT
TAATCTGTTATAATCCTCTTGTCCAGCAGTATCCCATAATCCAAGATTAA
CCGTGCTCCCATTGACAACCACATTTGCACTGAAATATCAAACACAGTTG
GCACATAATCCGTAGGGAAAGTGTTGCTGGGTGTAAAAATCANCAAACAA
GTTTACCCACAGNTNCATCGNCTACCGNACGCACTTAATAAACCTGATGC
GCTCATTNNTTTTTTTTTAAGAAGTGGCTTTTTAGTACCAAATATAAACT
TCAGAGAAAAGACAAGCACCCTCAATCCCACACCTGAGAGAACCGGATCG
NAGCGTACTTCATTAGCAT
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