EY755829

Overview
NameEY755829
Unique NameEY755829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RACC_DICDI (Rho-related protein racC OS=Dictyostelium discoideum GN=racC PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.464e-35
Identity = 74/155 (47.74%), Postives = 97/155 (62.58%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            Y    FP          +  N+      + LGLWDTAGQE+Y++LRPLSY  A+VF++ FS+ +  S+ENV  KW PE+ H+ P VP ILVGTKLD RDD+     +   G  PI+T QG +L + I A  Y+ECS+KT QN+K VFD AI+ VL
Sbjct:   26 YANNRFPEDYIPTVFDNYVVNLTAGDRNIELGLWDTAGQEEYDKLRPLSYANANVFLICFSITNPVSFENVYTKWYPEVMHFCPEVPQILVGTKLDTRDDRGVLDKLQQTGHKPITTEQGNDLARRIKAIKYMECSAKTSQNLKQVFDEAIKSVL 180          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO1_CANAL (GTP-binding protein RHO1 OS=Candida albicans GN=RHO1 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.526e-35
Identity = 69/138 (50.00%), Postives = 95/138 (68.84%), Query Frame = -2
Query:  277 FSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 684
            + A+V V+G  V L LWDTAGQEDY+RLRPLSY  ++V ++ FS+ S  S +NV +KWI E+ H+  GVPIILVG K DLRDD      +      P+ST++G+++ + IGA  Y+ECS+KT + V+ VF+AA R  L
Sbjct:   46 YVADVEVDGRKVELALWDTAGQEDYDRLRPLSYPDSNVILICFSVDSPDSLDNVLEKWISEVLHFCQGVPIILVGCKSDLRDDPHTIEALRQQQQQPVSTSEGQQVAQRIGAADYLECSAKTGRGVREVFEAATRASL 183          

HSP 2 Score: 34.2686 bits (77), Expect = 4.526e-35
Identity = 15/25 (60.00%), Postives = 16/25 (64.00%), Query Frame = -3
Query:  687 CG*TCLXIFTPSNTFPTDYVPTVFD 761
            CG TCL I     TFP  YVPTVF+
Sbjct:   20 CGKTCLLIVFSKGTFPEVYVPTVFE 44          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHOJ_MOUSE (Rho-related GTP-binding protein RhoJ OS=Mus musculus GN=Rhoj PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 7.615e-35
Identity = 74/174 (42.53%), Postives = 104/174 (59.77%), Query Frame = -2
Query:  220 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLHPPXXXXXXXXXXKACSIL 735
            Y    FP         +++  V V G    LGL+DTAGQEDYN+LRPLSY   DVF++ FS+++ ASY NV ++W+PELK   P VP +L+GT++DLRDD +    + +    P++   G +L K IGA  Y+ECS+ TQ+ +KAVFD AI  + HP             C+I+
Sbjct:   41 YANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSALTQKGLKAVFDEAILTIFHPKKKKKGCLGCHGCCAII 214          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RACC_ENTHI (Rho-related protein racC OS=Entamoeba histolytica GN=RACC PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.615e-35
Identity = 74/155 (47.74%), Postives = 98/155 (63.23%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            YT   FP          +  ++      + L LWDTAGQE+Y++LRPLSY  A +F++ FS+ S  SY+NV  KW PE+ H+AP VPIILVGTKLD R+D      +   G   I+TA+GEEL+  I A  YIECS+KT +N+K VFD A++ VL
Sbjct:   27 YTTNEFPKDYIPTVFDNYVVSLTAGTRQIQLALWDTAGQEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVL 181          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: CDC42_YEAST (Cell division control protein 42 OS=Saccharomyces cerevisiae GN=CDC42 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 7.615e-35
Identity = 73/158 (46.20%), Postives = 99/158 (62.66%), Query Frame = -2
Query:  268 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLHPP 735
            YT   FP          ++  V++      LGL+DTAGQEDY+RLRPLSY   DVF++ FS+IS  S+ENV +KW PE+ H+ PGVP ++VGT++DLRDDK     +      PI++ QG  L + + A  Y+ECS+ TQ+ +K VFD AI   L PP
Sbjct:   23 YTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPPSFENVKEKWFPEVHHHCPGVPCLVVGTQIDLRDDKVIIEKLQRQRLRPITSEQGSRLARELKAVKYVECSALTQRGLKNVFDEAIVAALEPP 180          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: CDC42_SCHPO (Cell division control protein 42 homolog OS=Schizosaccharomyces pombe GN=cdc42 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.299e-34
Identity = 74/158 (46.84%), Postives = 100/158 (63.29%), Query Frame = -2
Query:  268 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLHPP 735
            YT   FP          ++  V++      LGL+DTAGQEDY+RLRPLSY   DVF++ FS+ S AS+ENV +KW PE+ H+ PGVP ++VGT++DLRDD   Q  +      P++  QGE L + +GA  Y+ECS+ TQ+ +K VFD AI   L PP
Sbjct:   23 YTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDPSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDPP 180          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO1_KLULA (GTP-binding protein Rho1 OS=Kluyveromyces lactis GN=RHO1 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.208e-34
Identity = 71/138 (51.45%), Postives = 92/138 (66.67%), Query Frame = -2
Query:  277 FSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 684
            + A+V V+G  V L LWDTAGQEDY+RLRPLSY  ++V ++ +S+    S ENV +KWI E+ H+  GVPIILVG K DLR+D Q    +   G  P+S AQ +E+   IGA  YIECS+KT   V+ VF+AA R  L
Sbjct:   49 YVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLHFCQGVPIILVGCKADLRNDPQVVEELRAQGLQPVSQAQAQEVADQIGAVDYIECSAKTGYGVREVFEAATRASL 186          

HSP 2 Score: 33.4982 bits (75), Expect = 2.208e-34
Identity = 15/25 (60.00%), Postives = 15/25 (60.00%), Query Frame = -3
Query:  687 CG*TCLXIFTPSNTFPTDYVPTVFD 761
            CG TCL I      FP  YVPTVFD
Sbjct:   23 CGKTCLLIVFAKGKFPQVYVPTVFD 47          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO1_ASHGO (GTP-binding protein RHO1 OS=Ashbya gossypii GN=RHO1 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.356e-34
Identity = 70/138 (50.72%), Postives = 92/138 (66.67%), Query Frame = -2
Query:  277 FSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 684
            + A+V V+G  V L LWDTAGQEDY+RLRPLSY  ++V ++ +S+    S ENV +KWI E+ ++  GVPIILVG K DLR+D Q    +   G  P+S AQ +E+   IGA  YIECS+KT   V+ VF+AA R  L
Sbjct:   48 YVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLYFCQGVPIILVGCKADLRNDPQVIEQLRQQGQQPVSQAQAQEVADQIGAVEYIECSAKTGFGVREVFEAATRASL 185          

HSP 2 Score: 33.4982 bits (75), Expect = 6.356e-34
Identity = 15/25 (60.00%), Postives = 15/25 (60.00%), Query Frame = -3
Query:  687 CG*TCLXIFTPSNTFPTDYVPTVFD 761
            CG TCL I      FP  YVPTVFD
Sbjct:   22 CGKTCLLIVFAKGKFPQVYVPTVFD 46          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RACB_ENTHI (Rho-related protein racB (Fragment) OS=Entamoeba histolytica GN=RACB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.447e-34
Identity = 73/150 (48.67%), Postives = 98/150 (65.33%), Query Frame = -2
Query:  292 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 735
            YT   FP          +SA V+V+   +NLGLWDTAGQEDY+R+RPLSY   DVF+L FS++S  S+EN+S KW PE+ H+ P  P +L+GTK+D+RD++            PI++ QGE   K IGA  YIECS+ TQ+N++ VFD A
Sbjct:   14 YTTNAFPTEYVPTVFDNYSATVMVDSRPINLGLWDTAGQEDYDRIRPLSYPQTDVFLLCFSVVSPPSFENISSKWKPEVSHHCPNAPCLLIGTKIDIRDEQTQTNKTCDKKIEPITSEQGEAKCKDIGALKYIECSALTQKNLRYVFDEA 163          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: CDC42_ASHGO (Cell division control protein 42 OS=Ashbya gossypii GN=CDC42 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.447e-34
Identity = 70/158 (44.30%), Postives = 99/158 (62.66%), Query Frame = -2
Query:  268 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLHPP 735
            YT   FP          ++  V++      LGL+DTAGQEDY+RLRPLSY   DVF++ FS++S  S+ENV +KW PE+ H+ PGVP ++VGT++DLR++K     +      PI+  QGE+  + + A  Y+ECS+ TQ+ +K VFD AI   L PP
Sbjct:   23 YTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVVSPPSFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRENKMVIEKLQRQRLRPITPEQGEKFARELRAVKYVECSALTQRGLKNVFDEAIVAALEPP 180          
The following BLAST results are available for this feature:
BLAST of EY755829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
RACC_DICDI4.464e-3547.74Rho-related protein racC OS=Dictyostelium discoide... [more]
RHO1_CANAL4.526e-3550.00GTP-binding protein RHO1 OS=Candida albicans GN=RH... [more]
RHOJ_MOUSE7.615e-3542.53Rho-related GTP-binding protein RhoJ OS=Mus muscul... [more]
RACC_ENTHI7.615e-3547.74Rho-related protein racC OS=Entamoeba histolytica ... [more]
CDC42_YEAST7.615e-3546.20Cell division control protein 42 OS=Saccharomyces ... [more]
CDC42_SCHPO1.299e-3446.84Cell division control protein 42 homolog OS=Schizo... [more]
RHO1_KLULA2.208e-3451.45GTP-binding protein Rho1 OS=Kluyveromyces lactis G... [more]
RHO1_ASHGO6.356e-3450.72GTP-binding protein RHO1 OS=Ashbya gossypii GN=RHO... [more]
RACB_ENTHI6.447e-3448.67Rho-related protein racB (Fragment) OS=Entamoeba h... [more]
CDC42_ASHGO6.447e-3444.30Cell division control protein 42 OS=Ashbya gossypi... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-C11-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755829 ID=EY755829; Name=EY755829; organism=Citrus sinensis; type=EST; length=919bp
TTTTTTTTTTTTTTTTTTTTTTTGCAACAATGTAATGCATTTCAACAATT
AGAGCCGATCACAACAATTCCAACAAAACAATACAAAACCACCTGATGAT
TCACAGAGAGATCCTCACAGTTTGTCAATTGAGATTTCTTCCAGAGCAAA
GGAAGAAAGATGAGGGAGAATTTGAGAAAGGACAGAGGGTCATAATCTCT
TTACACCTAATTTCAATCACAATATAGAGCAGGCCTTTTGGGCTTTATTC
TTTTTCTTCTTCGTCTTTGGTGGGTGGAGGACAACTCTGATGGCTGCATC
AAATACTGCCTTCACATTCTGCTGTGTTTTTGAACTGCATTCAATGTAAG
CAGGTGCACCAATCAACTTCCTCAGCTCCTCCCCCTGAGCTGTACTAATG
GGCACGGCACCTGGATGATCAATGAAGAACTGCTTATCATCCCGAAGATC
AAGCTTTGTTCCAACAAGAATTATTGGCACACCAGGTGCATAATGTTTCA
ACTCTGGAATCCACTTCTTGGATACATTTTCATAACTTGCTTTGCTAATA
AGAGAGAATGCAAGAATGAAAACATCTGCACCACGGTAACTTAAAGGTCT
TAATCTGTTATAATCCTCTTGTCCAGCAGTATCCCATAATCCAAGATTAA
CCGTGCTCCCATTGACAACCACATTTGCACTGAAATATCAAACACAGTTG
GCACATAATCCGTAGGGAAAGTGTTGCTGGGTGTAAAAATCANCAAACAA
GTTTACCCACAGNTNCATCGNCTACCGNACGCACTTAATAAACCTGATGC
GCTCATTNNTTTTTTTTTAAGAAGTGGCTTTTTAGTACCAAATATAAACT
TCAGAGAAAAGACAAGCACCCTCAATCCCACACCTGAGAGAACCGGATCG
NAGCGTACTTCATTAGCAT
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