EY755829

Overview
NameEY755829
Unique NameEY755829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RACH_DICDI (Rho-related protein racH OS=Dictyostelium discoideum GN=racH PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.309e-33
Identity = 78/157 (49.68%), Postives = 96/157 (61.15%), Query Frame = -2
Query:  268 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGV-PIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLHPP 735
            YT   FP          ++AN +VN + +NLGLWDTAG E+YN  RPLSY G DVFI+ FSLIS+ S+ENV KKW PE+      V PIILVGTKLDLR   +          ++   GE++R  IGA  Y ECS+ TQ  +  VF+ A RVVL PP
Sbjct:   24 YTTNSFPGEYVPTVFDNYNANAIVNNTPINLGLWDTAGSEEYNSFRPLSYPGTDVFIICFSLISQTSFENVIKKWHPEIIQNMEQVPPIILVGTKLDLRGKGK-----SEEKEVTPEMGEQMRAAIGAYKYSECSALTQDGLTTVFEEAGRVVLFPP 175          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RACF2_DICDI (Rho-related protein racF2 OS=Dictyostelium discoideum GN=racF2 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.216e-32
Identity = 74/157 (47.13%), Postives = 101/157 (64.33%), Query Frame = -2
Query:  271 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLHP 735
            YT   FP          + AN++++G   +LGLWDTAGQE+Y+RLRPLSY   DVF++ FS+IS++S+ENVS KW  E+ H+APGVPI+LVGTK D+R+D      +       +   +G E  K I A  Y+E S+ TQ+ VK VFD  IR V++P
Sbjct:   23 YTTNGFPSEYLPTVFDNYCANLMLDGKPYSLGLWDTAGQEEYDRLRPLSYPQTDVFLICFSIISQSSFENVSTKWFKEVNHHAPGVPIVLVGTKQDIRNDNDSIKKLKERNIELVPYEKGLEKAKEINA-IYLEASALTQRGVKNVFDQCIRSVIYP 178          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: CDC42_PIG (Cell division control protein 42 homolog OS=Sus scrofa GN=CDC42 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.216e-32
Identity = 70/158 (44.30%), Postives = 98/158 (62.03%), Query Frame = -2
Query:  268 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLHPP 735
            YT   FP          ++  V++ G    LGL+DTAGQEDY+RLRPLSY   DVF++ FS++S +S+ENV +KW+PE+ H+ P  P +LVGT++DLRDD      +      PI+    E+L + + A  Y+ECS+ TQ+ +K VFD AI   L PP
Sbjct:   23 YTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQRGLKNVFDEAILSALEPP 180          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO1_SCHPO (GTP-binding protein rho1 OS=Schizosaccharomyces pombe GN=rho1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.394e-32
Identity = 62/143 (43.36%), Postives = 93/143 (65.03%), Query Frame = -2
Query:  268 FSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL--HPP 684
            + A+V V+G  V L LWDTAGQEDY+RLRPLSY  + V ++ F++ S  S +NV +KWI E+ H+   +PI+LV  K DLR+D +    +      P++T +G+ + + IGA  Y+ECS+KT + V+ VF++A R  +  H P
Sbjct:   43 YVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAMLKHKP 185          

HSP 2 Score: 34.2686 bits (77), Expect = 7.394e-32
Identity = 15/25 (60.00%), Postives = 16/25 (64.00%), Query Frame = -3
Query:  687 CG*TCLXIFTPSNTFPTDYVPTVFD 761
            CG TCL I     TFP  YVPTVF+
Sbjct:   17 CGKTCLLIVFSKGTFPEVYVPTVFE 41          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHOA_CANFA (Transforming protein RhoA OS=Canis familiaris GN=RHOA PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.108e-31
Identity = 68/155 (43.87%), Postives = 96/155 (61.94%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            +++  FP          + A++ V+G  V L LWDTAGQEDY+RLRPLSY   DV ++ FS+ S  S EN+ +KW PE+KH+ P VPIILVG K DLR+D+  +  +      P+   +G ++   IGA  Y+ECS+KT+  V+ VF+ A R  L
Sbjct:   25 FSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPTEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHO1_CAEEL (Ras-like GTP-binding protein rhoA OS=Caenorhabditis elegans GN=rho-1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.108e-31
Identity = 68/155 (43.87%), Postives = 95/155 (61.29%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            +++  FP          + A++ V+G  V L LWDTAGQEDY+RLRPLSY   DV ++ FS+ S  S EN+ +KW PE++H+ P VPIILVG K DLR D Q    +      P+   QG  + + IGA AY+ECS+KT+  ++ VF+ A +  L
Sbjct:   25 FSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAAL 179          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RACE_DICDI (Rho-related protein racE OS=Dictyostelium discoideum GN=racE PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.108e-31
Identity = 70/153 (45.75%), Postives = 94/153 (61.44%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            Y Q  FP          ++A        + + LWDTAGQE+Y+RLRPLSY GADV +L FS IS++SYE +  KW PE+ HY P VP ILVGTK+DLR+ +    +     PI+   G  ++K I A  Y+E S+KT+Q ++ VF AAI +VL
Sbjct:   31 YAQNDFPVDYVPTVFENYTATRKRGNEDIKVHLWDTAGQEEYDRLRPLSYPGADVVLLCFSTISQSSYEAIRDKWAPEVNHYIPDVPSILVGTKIDLREQQHPDPNSGKFEPITADMGISMQKQIKAKKYLEVSAKTRQGLEEVFSAAIEIVL 183          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHOL_DROME (Ras-like GTP-binding protein RhoL OS=Drosophila melanogaster GN=RhoL PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.671e-31
Identity = 68/158 (43.04%), Postives = 100/158 (63.29%), Query Frame = -2
Query:  268 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLR--DDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLHPP 735
            YT+  FP           + N+ V+    NL LWDTAGQEDY RLRPLSY   + F+L +S+ S+ S+ENV  KW PE++H++  VP++LVGTKLDLR  + ++F         ++T +G+++RK I A   +ECS+K +QN++ VF+ A+R V   P
Sbjct:   31 YTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTAGQEDYERLRPLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLRIPNSEKF---------VTTQEGKKMRKEIHAFNLVECSAKKKQNLQQVFEEAVRAVERKP 179          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHOA_RAT (Transforming protein RhoA OS=Rattus norvegicus GN=Rhoa PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.671e-31
Identity = 68/155 (43.87%), Postives = 96/155 (61.94%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            +++  FP          + A++ V+G  V L LWDTAGQEDY+RLRPLSY   DV ++ FS+ S  S EN+ +KW PE+KH+ P VPIILVG K DLR+D+  +  +      P+   +G ++   IGA  Y+ECS+KT+  V+ VF+ A R  L
Sbjct:   25 FSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179          
BLAST of EY755829 vs. ExPASy Swiss-Prot
Match: RHOA_PONAB (Transforming protein RhoA OS=Pongo abelii GN=RHOA PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.671e-31
Identity = 68/155 (43.87%), Postives = 96/155 (61.94%), Query Frame = -2
Query:  277 YTQQHFPYGLCANCV*YFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVL 735
            +++  FP          + A++ V+G  V L LWDTAGQEDY+RLRPLSY   DV ++ FS+ S  S EN+ +KW PE+KH+ P VPIILVG K DLR+D+  +  +      P+   +G ++   IGA  Y+ECS+KT+  V+ VF+ A R  L
Sbjct:   25 FSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179          
The following BLAST results are available for this feature:
BLAST of EY755829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
RACH_DICDI9.309e-3349.68Rho-related protein racH OS=Dictyostelium discoide... [more]
RACF2_DICDI1.216e-3247.13Rho-related protein racF2 OS=Dictyostelium discoid... [more]
CDC42_PIG1.216e-3244.30Cell division control protein 42 homolog OS=Sus sc... [more]
RHO1_SCHPO7.394e-3243.36GTP-binding protein rho1 OS=Schizosaccharomyces po... [more]
RHOA_CANFA5.108e-3143.87Transforming protein RhoA OS=Canis familiaris GN=R... [more]
RHO1_CAEEL5.108e-3143.87Ras-like GTP-binding protein rhoA OS=Caenorhabditi... [more]
RACE_DICDI5.108e-3145.75Rho-related protein racE OS=Dictyostelium discoide... [more]
RHOL_DROME6.671e-3143.04Ras-like GTP-binding protein RhoL OS=Drosophila me... [more]
RHOA_RAT6.671e-3143.87Transforming protein RhoA OS=Rattus norvegicus GN=... [more]
RHOA_PONAB6.671e-3143.87Transforming protein RhoA OS=Pongo abelii GN=RHOA ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-C11-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755829 ID=EY755829; Name=EY755829; organism=Citrus sinensis; type=EST; length=919bp
TTTTTTTTTTTTTTTTTTTTTTTGCAACAATGTAATGCATTTCAACAATT
AGAGCCGATCACAACAATTCCAACAAAACAATACAAAACCACCTGATGAT
TCACAGAGAGATCCTCACAGTTTGTCAATTGAGATTTCTTCCAGAGCAAA
GGAAGAAAGATGAGGGAGAATTTGAGAAAGGACAGAGGGTCATAATCTCT
TTACACCTAATTTCAATCACAATATAGAGCAGGCCTTTTGGGCTTTATTC
TTTTTCTTCTTCGTCTTTGGTGGGTGGAGGACAACTCTGATGGCTGCATC
AAATACTGCCTTCACATTCTGCTGTGTTTTTGAACTGCATTCAATGTAAG
CAGGTGCACCAATCAACTTCCTCAGCTCCTCCCCCTGAGCTGTACTAATG
GGCACGGCACCTGGATGATCAATGAAGAACTGCTTATCATCCCGAAGATC
AAGCTTTGTTCCAACAAGAATTATTGGCACACCAGGTGCATAATGTTTCA
ACTCTGGAATCCACTTCTTGGATACATTTTCATAACTTGCTTTGCTAATA
AGAGAGAATGCAAGAATGAAAACATCTGCACCACGGTAACTTAAAGGTCT
TAATCTGTTATAATCCTCTTGTCCAGCAGTATCCCATAATCCAAGATTAA
CCGTGCTCCCATTGACAACCACATTTGCACTGAAATATCAAACACAGTTG
GCACATAATCCGTAGGGAAAGTGTTGCTGGGTGTAAAAATCANCAAACAA
GTTTACCCACAGNTNCATCGNCTACCGNACGCACTTAATAAACCTGATGC
GCTCATTNNTTTTTTTTTAAGAAGTGGCTTTTTAGTACCAAATATAAACT
TCAGAGAAAAGACAAGCACCCTCAATCCCACACCTGAGAGAACCGGATCG
NAGCGTACTTCATTAGCAT
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