EY755708

Overview
NameEY755708
Unique NameEY755708
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755708 vs. ExPASy Swiss-Prot
Match: H36_STYLE (Histone H3-6 (Fragment) OS=Stylonychia lemnae GN=H3-6 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.333e-47
Identity = 96/114 (84.21%), Postives = 106/114 (92.98%), Query Frame = 3
Query:   63 STGGKAPRKQLATKAARKS--APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 398
            +TGGKAPRK +A K A+KS  A  TGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQ++K+DLRFQS AVLALQEAAEAY+VGLFEDTNLCAIHAKRVTIMP
Sbjct:    1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQEYKSDLRFQSQAVLALQEAAEAYMVGLFEDTNLCAIHAKRVTIMP 114          
BLAST of EY755708 vs. ExPASy Swiss-Prot
Match: H35_STYLE (Histone H3-5 (Fragment) OS=Stylonychia lemnae GN=H3-5 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.971e-47
Identity = 97/114 (85.09%), Postives = 104/114 (91.23%), Query Frame = 3
Query:   63 STGGKAPRKQLATKAARKSAPTTG--GVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 398
            +TG KAPRKQLA KAARKS       GVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQ++K+DLRFQS AVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP
Sbjct:    1 NTGAKAPRKQLANKAARKSTNVNAVSGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQEYKSDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 114          
BLAST of EY755708 vs. ExPASy Swiss-Prot
Match: H33L1_CAEEL (Histone H3.3-like type 1 OS=Caenorhabditis elegans GN=his-70 PE=2 SV=3)

HSP 1 Score: 188.734 bits (478), Expect = 2.971e-47
Identity = 98/126 (77.78%), Postives = 108/126 (85.71%), Query Frame = 3
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 410
            MARTK TARKS GGKAPRK LATKAARK  P  G VKK  RYRP + AL+EIRKYQKSTELL+RKLPFQRLVRE+AQ+   ++RFQS A+ AL EAAEAYL+GLFEDTNLCAIHAKRVTIMPKD+Q
Sbjct:    1 MARTKHTARKSFGGKAPRKSLATKAARKVFPVDGQVKK--RYRPSSNALKEIRKYQKSTELLVRKLPFQRLVREVAQEIMPNVRFQSAAIQALHEAAEAYLIGLFEDTNLCAIHAKRVTIMPKDMQ 124          
BLAST of EY755708 vs. ExPASy Swiss-Prot
Match: H38_STYLE (Histone H3-8 (Fragment) OS=Stylonychia lemnae GN=H3-8 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.880e-47
Identity = 94/113 (83.19%), Postives = 102/113 (90.27%), Query Frame = 3
Query:   63 STGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 398
            +TG KAPRK LA KAARK+A P   G+KKPHRYRPGTVALREIRKYQKST+LLIRKLPFQRLVREIA ++K DLRFQS AVLALQEAAEAY++GLFEDTNLCAIH KRVTIMP
Sbjct:    1 NTGAKAPRKHLANKAARKTAAPANAGIKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIASEYKNDLRFQSSAVLALQEAAEAYMIGLFEDTNLCAIHGKRVTIMP 113          
BLAST of EY755708 vs. ExPASy Swiss-Prot
Match: H33_STYLE (Histone H3-3 (Fragment) OS=Stylonychia lemnae GN=H3-3 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.067e-47
Identity = 96/114 (84.21%), Postives = 104/114 (91.23%), Query Frame = 3
Query:   63 STGGKAPRKQLATKAARKS--APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 398
            +TGGKAPRK +A K A+KS  A  TGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIA +FK DLRFQS AVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMP
Sbjct:    1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 114          
BLAST of EY755708 vs. ExPASy Swiss-Prot
Match: H39_STYLE (Histone H3-2 (Fragment) OS=Stylonychia lemnae GN=H3-2 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.602e-46
Identity = 95/114 (83.33%), Postives = 103/114 (90.35%), Query Frame = 3
Query:   63 STGGKAPRKQLATKAARKS--APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 398
            +TGGKAPRK +A K A+KS  A  TGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIA +FK DLRFQS AVLALQEA+EAYLVGLFEDTNL AIHAKRVTIMP
Sbjct:    1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLAAIHAKRVTIMP 114          
BLAST of EY755708 vs. ExPASy Swiss-Prot
Match: H37_STYLE (Histone H3-7 (Fragment) OS=Stylonychia lemnae GN=H3-7 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.602e-46
Identity = 95/114 (83.33%), Postives = 103/114 (90.35%), Query Frame = 3
Query:   63 STGGKAPRKQLATKAARKS--APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 398
            +TGGKAPRK +A K A+KS  A  TGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIA +FK DLRFQS AVLALQEA+EAYLVGLFEDTNL AIHAKRVTIMP
Sbjct:    1 NTGGKAPRKHIAHKQAKKSSAAAATGGVKKPHRFRPGTVALREIRRFQKSTELLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLAAIHAKRVTIMP 114          
BLAST of EY755708 vs. ExPASy Swiss-Prot
Match: H3_GUITH (Histone H3 OS=Guillardia theta PE=3 SV=3)

HSP 1 Score: 178.718 bits (452), Expect = 3.074e-44
Identity = 92/125 (73.60%), Postives = 105/125 (84.00%), Query Frame = 3
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDI 407
            MARTKQTARK+ GG     +++ K A+        +KK HRY+PGTVALREIRKYQKST LLIRKLPFQRLVRE+AQD+K+DLRFQ+ AVLALQEA+E+YLV LFEDTNLCAIHAKRVTIMPKDI
Sbjct:    1 MARTKQTARKTVGGDI-NSRISEKRAKSDNSKNIDLKKVHRYKPGTVALREIRKYQKSTNLLIRKLPFQRLVRELAQDYKSDLRFQNSAVLALQEASESYLVNLFEDTNLCAIHAKRVTIMPKDI 124          
BLAST of EY755708 vs. ExPASy Swiss-Prot
Match: H3L4_ARATH (Histone H3-like 4 OS=Arabidopsis thaliana GN=At5g12910 PE=2 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 7.572e-43
Identity = 90/126 (71.43%), Postives = 106/126 (84.13%), Query Frame = 3
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 410
            MAR+ QTARK+TGGKAP    A +  + S P    +KKP+RY+PGTVALREIRKYQK+T+L+IRKLPFQRLV+EIAQ  K DLRFQ+ AV ALQEAAEA++VG+FEDTNLCA+HAKR TIMPKDIQ
Sbjct:    1 MARSNQTARKATGGKAPH--FAMRVWQHSTPP---LKKPYRYKPGTVALREIRKYQKTTDLVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFEDTNLCAMHAKRSTIMPKDIQ 121          
BLAST of EY755708 vs. ExPASy Swiss-Prot
Match: H3L_BOVIN (Histone H3-like OS=Bos taurus PE=2 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 1.337e-39
Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 3
Query:   33 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFED---TNLCAIHAK 380
            MARTK+TA KSTGGK PRKQL  +AA KSAP+T G+ KPHRYRPGTVALREIR YQKST  LIRKLPFQRLVREIAQDFKTDL+FQS A+  LQEA+EAYLV   E    +NL  ++++
Sbjct:    1 MARTKRTAYKSTGGKVPRKQLVIEAAGKSAPSTSGMTKPHRYRPGTVALREIRPYQKSTHFLIRKLPFQRLVREIAQDFKTDLKFQSAAIRTLQEASEAYLVVFLESKQHSNLARMYSQ 119          
The following BLAST results are available for this feature:
BLAST of EY755708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H36_STYLE1.333e-4784.21Histone H3-6 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H35_STYLE2.971e-4785.09Histone H3-5 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H33L1_CAEEL2.971e-4777.78Histone H3.3-like type 1 OS=Caenorhabditis elegans... [more]
H38_STYLE3.880e-4783.19Histone H3-8 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H33_STYLE5.067e-4784.21Histone H3-3 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H39_STYLE5.602e-4683.33Histone H3-2 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H37_STYLE5.602e-4683.33Histone H3-7 (Fragment) OS=Stylonychia lemnae GN=H... [more]
H3_GUITH3.074e-4473.60Histone H3 OS=Guillardia theta PE=3 SV=3[more]
H3L4_ARATH7.572e-4371.43Histone H3-like 4 OS=Arabidopsis thaliana GN=At5g1... [more]
H3L_BOVIN1.337e-3971.43Histone H3-like OS=Bos taurus PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-031-F07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755708 ID=EY755708; Name=EY755708; organism=Citrus sinensis; type=EST; length=776bp
GAATTGTGTAGAGGAGTTGAAGAAACTCAGAGATGGCCCGTACCAAGCAA
ACTGCACGTAAGTCAACCGGAGGAAAGGCTCCTAGGAAGCAACTTGCTAC
CAAGGCCGCCCGTAAGTCTGCGCCCACCACCGGTGGTGTTAAGAAGCCTC
ATCGTTACCGTCCTGGAACCGTCGCCCTTCGAGAAATTCGCAAGTACCAG
AAGAGTACCGAGCTGCTTATCAGGAAACTCCCATTCCAGAGACTTGTTCG
TGAAATTGCTCAGGACTTTAAGACTGATCTGCGTTTCCAGAGCCATGCAG
TGCTGGCCCTGCAGGAGGCAGCGGAGGCTTACCTTGTTGGTCTCTTCGAG
GACACTAACCTCTGCGCCATTCATGCAAAGCGTGTCACTATTATGCCCAA
GGACATACAGCTTGCCCGTAGGATCCGTGGCGAGCGTGCTTAAGCGTAAT
TGCTGGTTGCTTCAATTTGAATGACTGGAAGGGAAGGGGGCAGTTGTAAT
GTGTTAATTTGTACGTGGGGGTTGGTGGGGGGGGTANATANGNNGTANGA
TTCCANTANTTATTANAATATGGCTTTTGTCATCATCTGGGTTTGTTTTT
GGTGGTGGGTTTATAATGTCTATTTGTTGATGATGGGGATTTTAATTCGC
CATAAGAGACTGGCTTTTATGTGTTCTTTTGGATATTCTGTGCCACAGTA
GTGGTGGTGTTGAACATCTCTATTATTTTGCATCTAATCTAAGTTTAGGT
TGGTATTTAAAAAAAAAAAAAAAAAA
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