EY755697

Overview
NameEY755697
Unique NameEY755697
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755697_ssr354 microsatellite EY755697_ssr354:354..363. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10229 contig Csv1_Contig10229:37..907. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755697 vs. ExPASy Swiss-Prot
Match: PSBP_SINAL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba GN=PSBP PE=2 SV=2)

HSP 1 Score: 350.903 bits (899), Expect = 5.476e-96
Identity = 176/250 (70.40%), Postives = 211/250 (84.40%), Query Frame = 1
Query:   13 MASTQCFLHHHALSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITATVKGGQLYFCKGAAGDKXWFRG 741
            MA + CFLH  AL+++ AR+S   SSQR+VS  K   +VC+AQ+    E+D S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPK NTDF  Y+GDGF++ +P+KWNPS+E E+PGQVLRYEDNFD  SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGKQAY G+T+SEGGFD +AVATANILE +++     PYY+LSVLTRTADGDEGGKHQLITATV GG+LY CK  AGDK WF+G
Sbjct:    1 MAYSACFLHQSALASSTARSSPSSSSQRYVSISK---LVCKAQQ--THEEDNSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKG 245          
BLAST of EY755697 vs. ExPASy Swiss-Prot
Match: PSBP_NARPS (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus GN=PSBP PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 7.926e-87
Identity = 167/259 (64.48%), Postives = 190/259 (73.36%), Query Frame = 1
Query:   13 MASTQCFLHHHA-------LSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASV----RPPYYFLSVLTRTADGDEGGKHQLITATVKGGQLYFCKGAAGDKXWFRGTR 747
            MAST CFLHHHA       LS T + T+     Q H + ++  +  C  +  A+       +SRRLALT+LIG AA+GS+VS ADAAYGESANVFGKPKTNTDF    GDGFK+ IPSKWNPSKE EFPGQVLRYEDNFD  SNV V++ PTDKKSI DYGSPE+FLS+VDYLLGKQAY GKT SEGGF+P+AV TANILE S        YY + VLTRTADGDEGGKH LITATV  G+LY CK  AGDK WF+G +
Sbjct:    1 MASTACFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDAL-------LSRRLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNPSKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYFGKTISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKLYICKAQAGDKRWFKGAK 252          
BLAST of EY755697 vs. ExPASy Swiss-Prot
Match: PSBP_BRAJU (Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) OS=Brassica juncea GN=PSBP PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 7.926e-87
Identity = 154/202 (76.24%), Postives = 178/202 (88.12%), Query Frame = 1
Query:  148 EDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITATVKGGQLYFCKGAAGDKXWFRG 741
            EDD S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDF   NGDGF++ +P+KWNPS+E E+PGQVLRYEDNFD  SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGKQAY G+T+ EGGFD +AVATANILE +++     PYY+LSVLTRTAD DEGGKHQLITATV GG+LY CK  AGDK WF+G
Sbjct:    1 EDDTSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETACEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADEDEGGKHQLITATVNGGKLYICKAQAGDKRWFKG 202          
BLAST of EY755697 vs. ExPASy Swiss-Prot
Match: PSBP_WHEAT (Oxygen-evolving enhancer protein 2, chloroplastic OS=Triticum aestivum GN=PSBP PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 9.068e-83
Identity = 162/251 (64.54%), Postives = 191/251 (76.10%), Query Frame = 1
Query:   13 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQEDDGSAV-SRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASV----RPPYYFLSVLTRTADGDEGGKHQLITATVKGGQLYFCKGAAGDKXWFRGTR 747
            MAST CFLH      + AR ++S R    +  TQ+ VC+AQK      D + V SRR AL++L GAAA+  KVSPA AAYGE+ANVFGK K NTDF+ Y+G+GFKL IP+KWNPSKEREFPGQVLRYEDNFD  SN+SVII PT KK+ITDYGSPEEFLS+V +LLG+Q+Y GKT SEGGF+ DAVATAN+LE+S        YY ++VLTRTADGDEGGKHQLITATV  G+LY CK A  DK WF+G +
Sbjct:    1 MASTSCFLHQ-----STARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAALSLLAGAAAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLRYEDNFDATSNLSVIINPTTKKTITDYGSPEEFLSQVGFLLGQQSYGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCK-AQRDKRWFKGAK 245          
BLAST of EY755697 vs. ExPASy Swiss-Prot
Match: PSBP_CHLRE (Oxygen-evolving enhancer protein 2, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBP PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.319e-57
Identity = 126/251 (50.20%), Postives = 160/251 (63.75%), Query Frame = 1
Query:   13 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDPNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR-----PPYYFLSVLTRTADGDEGGKHQLITATV-KGGQLYFCKGAAGDKXWFRGTR 747
            MA+  C   + A +  P    +S+R       + +V RA         GS VSRR AL    GAAA+ S  SPA+AAYG+SANVFGK    + F+PY GDGF L +P+KWNPSKE +FPG +LRYEDNFD  +N+ VI   TDKK+I D+GS ++FL  V YLLGKQAYSG+T SEGGF P+ V+ A++L+ S         YY   +L R+ADGDEGG+HQLI ATV    +LY  K   GDK WF+G +
Sbjct:    1 MATALC---NKAFAAAPVARPASRR-------SAVVVRAS--------GSDVSRRAALAGFAGAAALVSS-SPANAAYGDSANVFGKVTNKSGFVPYAGDGFALLLPAKWNPSKENDFPGVILRYEDNFDAVNNLVVIAQDTDKKAIADFGSQDKFLESVSYLLGKQAYSGETQSEGGFAPNRVSAASLLDVSTTTDKKGKTYYKYELLVRSADGDEGGRHQLIGATVGSDNKLYIIKIQIGDKRWFKGAK 232          
BLAST of EY755697 vs. ExPASy Swiss-Prot
Match: PSBP2_ARATH (Putative oxygen-evolving enhancer protein 2-2 OS=Arabidopsis thaliana GN=PSBP2 PE=5 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 9.174e-43
Identity = 85/112 (75.89%), Postives = 96/112 (85.71%), Query Frame = 1
Query:  424 IITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITATVKGGQLYFCKGAAGDKXWFRGTR 747
            +ITPTDKKSITDYGSPE+FLS+V+YLLGKQAY G+T+SEGGFD +AVATANILE S +      YY+LSVLTRTADGDEGGKHQLITATV GG+LY CK  AGDK WF+G R
Sbjct:    1 MITPTDKKSITDYGSPEQFLSQVNYLLGKQAYVGETASEGGFDANAVATANILETSTQEIGGKEYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGAR 112          
The following BLAST results are available for this feature:
BLAST of EY755697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PSBP_SINAL5.476e-9670.40Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_NARPS7.926e-8764.48Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_BRAJU7.926e-8776.24Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_WHEAT9.068e-8364.54Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_CHLRE1.319e-5750.20Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP2_ARATH9.174e-4375.89Putative oxygen-evolving enhancer protein 2-2 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-031-E07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755697 ID=EY755697; Name=EY755697; organism=Citrus sinensis; type=EST; length=870bp
CGAAAATAAAAAATGGCTTCAACTCAATGCTTCTTGCACCACCATGCACT
CTCTACTACACCAGCAAGAACATCATCATCTCAGCGCCACGTGTCAAACA
TCAAGCCCACCCAGATTGTCTGCCGTGCGCAGAAGCAAGCTGTCCAAGAA
GATGACGGCAGCGCCGTCTCCCGCCGTTTGGCTCTGACGGTGCTCATTGG
TGCTGCTGCCGTCGGCTCCAAGGTCTCTCCTGCCGACGCTGCCTACGGTG
AATCTGCCAATGTGTTTGGTAAGCCAAAGACCAACACTGACTTCTTGCCA
TACAATGGAGATGGATTCAAGCTGTCGATTCCCTCAAAATGGAACCCCAG
CAAAGAGAGAGAGTTCCCTGGTCAGGTTCTTAGATACGAAGACAACTTTG
ATCCCAACAGCAATGTCTCCGTCATAATCACCCCAACTGACAAGAAATCC
ATCACTGACTACGGTTCCCCCGAGGAATTCCTCAGTAAGGTGGACTACTT
GCTGGGAAAACAAGCCTATTCCGGCAAAACTTCGTCTGAGGGTGGTTTCG
ACCCTGATGCTGTGGCAACAGCTAACATCTTGGAGGCTTCAGTCCGACCA
CCATACTACTTCTTGTCTGTATTAACAAGAACTGCTGATGGAGATGAAGG
TGGCAAGCATCAACTAATTACAGCCACGGTTAAAGGTGGGCAGCTTTACT
TCTGCAAGGGCGCAGCTGGAGACAAGNAGTGGTTTAGGGGAACAAGAAGT
TTGTGGAAGCACTGCCAGTTCTTTCAGTGTTGCTTGAGACATAATCAAAT
TTTTATGTAATCCAACTAATGTTGCCGGTTGGTTTGAATATCTATCCCAT
CTTTCCCAAAAAAAAAAAAA
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