EY755542

Overview
NameEY755542
Unique NameEY755542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY755542 vs. ExPASy Swiss-Prot
Match: FDH_PSESR (Formate dehydrogenase OS=Pseudomonas sp. (strain 101) PE=1 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 7.269e-40
Identity = 85/153 (55.56%), Postives = 101/153 (66.01%), Query Frame = 3 
Query:  354 LGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLKXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNXAGVAYRAYDLEGKTVGTVGCGPI 812
            LG V G  GLR++LES GH  +VT DK+GPD   E+ + D  V+IS PF PAY+T ERI KAKNL+L LTAG+GSDH+DL+      +TVAEVT  N +SVAE  +M IL LVRN+LP H     G WN A     AYDLE   VGTV  G I
Sbjct:   51 LGSVSGELGLRKYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRI 203
The following BLAST results are available for this feature:
BLAST of EY755542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
FDH_PSESR7.269e-4055.56Formate dehydrogenase OS=Pseudomonas sp. (strain 1... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-029-E11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755542 ID=EY755542; Name=EY755542; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGCAAAAGCAAAAACGTTATCAAATTTCATGTTTTCACCAT
CTCGTTTAAATAAATTAAAATAAAAAGGCAAAGCAGAAGTCAAAGCCTGC
CGTTAAAACTTGAAAAGGTTTCCCCTATAAAAGCGCTGTGCTTTTGTGAG
AACTCAGCAGTGTGAGTGACAAATTATATAATTGGGAGATGGCCATGAAG
AGAGTAGCTAGCTCTGCAATTAACGCTTTTGCTTCGTCGGGATTTCTTCG
TTCATCGTCGAGATTTTCTCGACACTATGCTTCTTCTGGAAGTAAGAAGA
TTGTTGGGGTGTTCTACAAGGGCAATGAATACGCTTCAATGAATCCCAAC
TTTCTTGGTTGTGTGGAGGGAGGCTGTGGCCTGCGTGAATGGCTGGAATC
GAAAGGTCACCAATATATTGTCACTGATGACAAAGAGGGACCAGACTGTG
AACTAGAGAAACATATTCCTGATCTCCATGTCCTCATATCTACCCCCTTC
CACCCTGCCTATGTTACGGCGGAAAGGATTAAGAAGGCCAAAAATTTGCA
ACTGCTTCTCACTGCTGGAGTTGGCTCTGATCATATTGATCTAAAAGCTG
CTGCTGCTGCTGGTTTAACTGTTGCTGAAGTTACTGGAAGCAATGTGGTT
TCAGTTGCTGAGGACGAGCTTATGAGAATCCTTATTCTTGTCCGTAATTT
CTTACCTGGACACCATCAAGTTATCAGTGGGGAATGGAATNGTGCCGGTG
TTGCTTATAGAGCTTATGATCTTGAAGGAAAGACAGTGGGAACTGTTGGT
TGTGGACCCATTNGGCAGCTGTTGCTCCAACAACTAAACTTNCCATTGGT
AATCTCCTTTCATGACCGGGGGA
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