EY730689
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY730689 vs. ExPASy Swiss-Prot
Match: NDOB_PSEPU (Naphthalene 1,2-dioxygenase subunit alpha OS=Pseudomonas putida GN=ndoB PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.695e-28 Identity = 70/199 (35.18%), Postives = 101/199 (50.75%), Query Frame = -3 Query: 58 IFTDPDLFALEMKHIFEGGWVYLAHESQVPEINDYFTTWIGRQPVVITRDKKGTLHGLVNACAHRGAMLCRRKQGNKGSFTCPFHGWTFSNAGKLLKVKDAKTGAYPDSFD--CDGSHDLKRLGRFENYRGFLFGSLSETVPELSDYLGETRVIIDQMVDQAPLGLEVLRGSSSYVYDGNWKLQIEN-GADGYHVSSVH 645 I D +LF E+K IF W++L H+S +P DY T +G V+++R G++ +N C HRG L + GN F C +HGW F + G+L V K Y +S + C G LK + R E++ GF++G + P L DYLG+ ++ M + GLE++ V NWK EN D YHV H Sbjct: 20 IHGDEELFQHELKTIFARNWLFLTHDSLIPAPGDYVTAKMGIDEVIVSRQNDGSIRAFLNVCRHRGKTLVSVEAGNAKGFVCSYHGWGFGSNGELQSVPFEK-DLYGESLNKKCLG---LKEVARVESFHGFIYGCFDQEAPPLMDYLGDAAWYLEPMFKHSG-GLELVGPPGKVVIKANWKAPAENFVGDAYHVGWTH 213
BLAST of EY730689 vs. ExPASy Swiss-Prot
Match: NDOB_PSEFL (Naphthalene 1,2-dioxygenase subunit alpha OS=Pseudomonas fluorescens GN=ndoB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.980e-27 Identity = 67/199 (33.67%), Postives = 100/199 (50.25%), Query Frame = -3 Query: 58 IFTDPDLFALEMKHIFEGGWVYLAHESQVPEINDYFTTWIGRQPVVITRDKKGTLHGLVNACAHRGAMLCRRKQGNKGSFTCPFHGWTFSNAGKLLKVKDAKTGAYPDSFD--CDGSHDLKRLGRFENYRGFLFGSLSETVPELSDYLGETRVIIDQMVDQAPLGLEVLRGSSSYVYDGNWKLQIEN-GADGYHVSSVH 645 I D +LF E++ I W++L H+S +P DY T +G V+++R G++ +N C HRG L + GN F C +HGW F + G+L V K Y +S + C G LK + R E++ GF++G + P L DYLG+ ++ + + GLE++ V NWK EN D YHV H Sbjct: 20 IHGDEELFQHELRTIXARNWLFLTHDSLIPSPGDYVTAKMGIDEVIVSRQSDGSIRAFLNVCRHRGKTLVNAEAGNAKGFVCSYHGWGFGSNGELQSVPFEKE-LYGESLNKKCLG---LKEVARVESFHGFIYGCFDQEAPSLMDYLGDAAWYLEPIFKHSG-GLELVGPPGKVVIKANWKAPAENFVGDAYHVGWTH 213
BLAST of EY730689 vs. ExPASy Swiss-Prot
Match: CHMO_ARATH (Choline monooxygenase, chloroplastic OS=Arabidopsis thaliana GN=At4g29890 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 4.313e-18 Identity = 61/205 (29.76%), Postives = 95/205 (46.34%), Query Frame = -3 Query: 58 FTDPDLFALEMKHIFEGGWVYLAHESQVPEINDYFTTWIGRQPVVITRDKKGTLHGLVNACAHRGAMLCRRKQGNKGSFTCPFHGWTFSNAGKLLKVKD---------AKTGAYPDSFDCDGSHDLKRLGRFENYRGFLFGSLSETVPELSDYLGETRVIIDQMVDQAPLGLEVLRGSSSYVYDGNWKLQIENGAD-GYHVSSVH 642 +TDP ++ E+ +F GGW + + Q+ E D+FT +G V+ RD+ G +H N C+H ++L G K F C +HGWT+S +G L+K ++ G P G L ++ + +G + E V S++LG + + Q +PL R Y D NWK+ +N D GYHV H Sbjct: 78 YTDPQFYSFELDRVFYGGWQAVGYSDQIKESRDFFTGRLGDVDFVVCRDENGKIHAFHNVCSHHASILA-SGNGRKSCFVCLYHGWTYSLSGSLVKATRMSGIQNFSLSEMGLKPLRVAVWGPFVLLKVTAATSRKGEV--ETDELV--ASEWLGTSVGRLSQGGVDSPLSYICRR---EYTIDCNWKVFCDNYLDGGYHVPYAH 274
BLAST of EY730689 vs. ExPASy Swiss-Prot
Match: CHMO_AMATR (Choline monooxygenase, chloroplastic OS=Amaranthus tricolor GN=CMO PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.313e-18 Identity = 60/217 (27.65%), Postives = 97/217 (44.70%), Query Frame = -3 Query: 13 FTDPDLFALEMKHIFEGGWVYLAHESQVPEINDYFTTWIGRQPVVITRDKKGTLHGLVNACAHRGAMLCRRKQGNKGSFTCPFHGWTFSNAGKLLKVKDAKTGAYPDSFDCDGSHDLKRLG----RFENYRGFLFGSLSETVPELSDYLGETRV--IIDQMVDQAPLGLEVLRGSSSYVYDGNWKLQIENGAD-GYHVSSVHWNYSATMGRRNYEAE 642 +TDP L++ E+ IF GW + Q+ E N YFT +G ++ RD +G +H N C HR ++L G K F CP+HGW F G L+K + + D K LG + + F+ SL + E ++ +G+ + +++ A S + + NWK+ +N D YHV H Y+A + Y+ + Sbjct: 105 YTDPSLYSHELDRIFSKGWQVAGYSDQIKEPNQYFTGSLGNVEYLVCRDGQGKVHAFHNVCTHRASILA-CGTGKKSCFVCPYHGWVFGLDGSLMKATKTENQVF----------DPKELGLVTLKVAIWGPFVLISLDRSGSEGTEDVGKEWIGSCAEEVKKHAFDPSLQFINRSEFPMESNWKVFCDNYLDSAYHVPYAHKYYAAELDFDTYKTD 310
BLAST of EY730689 vs. ExPASy Swiss-Prot
Match: YEAW_ECOLI (Putative dioxygenase subunit alpha yeaW OS=Escherichia coli (strain K12) GN=yeaW PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.228e-17 Identity = 55/200 (27.50%), Postives = 90/200 (45.00%), Query Frame = -3 Query: 46 FTDPDLFALEMKHIFEGGWVYLAHESQVPEINDYFTTWIGRQPVVITRDKKGTLHGLVNACAHRGAMLCRRKQGNKGSFTCPFHGWTFSNAGKLLKVKDAKTGAYPDSFDCDGSHDLKRLGRFENYRGFLFGSLSETVPELSDYL-GETRVIIDQMVDQAPLGLEVLRGSSSYVYDGNWKLQIENGADGYHVSSVHWNYS 642 +TD + F E +++F W+ +AH S++ NDY T I + +V+ R + L N C HRG L + K TCP+H W F G L ++ + A +FD D + + R E Y GF+F ++ + D L G +++ + L L + + NWK ++N + YH H +S Sbjct: 29 YTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA---NFDSDKAQLVP--VRLEEYAGFVFINMDPNATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRT---PANWKNIVDNYLECYHCGPAHPGFS 220
BLAST of EY730689 vs. ExPASy Swiss-Prot
Match: YEAW_ECO57 (Putative dioxygenase subunit alpha yeaW OS=Escherichia coli O157:H7 GN=yeaW PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.228e-17 Identity = 55/200 (27.50%), Postives = 90/200 (45.00%), Query Frame = -3 Query: 46 FTDPDLFALEMKHIFEGGWVYLAHESQVPEINDYFTTWIGRQPVVITRDKKGTLHGLVNACAHRGAMLCRRKQGNKGSFTCPFHGWTFSNAGKLLKVKDAKTGAYPDSFDCDGSHDLKRLGRFENYRGFLFGSLSETVPELSDYL-GETRVIIDQMVDQAPLGLEVLRGSSSYVYDGNWKLQIENGADGYHVSSVHWNYS 642 +TD + F E +++F W+ +AH S++ NDY T I + +V+ R + L N C HRG L + K TCP+H W F G L ++ + A +FD D + + R E Y GF+F ++ + D L G +++ + L L + + NWK ++N + YH H +S Sbjct: 29 YTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVA---NFDSDKAQLVP--VRLEEYAGFVFINMDPNATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRT---PANWKNIVDNYLECYHCGPAHPGFS 220
BLAST of EY730689 vs. ExPASy Swiss-Prot
Match: CHMO_SPIOL (Choline monooxygenase, chloroplastic OS=Spinacia oleracea GN=CMO PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.228e-17 Identity = 61/219 (27.85%), Postives = 97/219 (44.29%), Query Frame = -3 Query: 13 FTDPDLFALEMKHIFEGGWVYLAHESQVPEINDYFTTWIGRQPVVITRDKKGTLHGLVNACAHRGAMLCRRKQGNKGSFTCPFHGWTFSNAGKLLKVKDAKTGAYPDSFDCDGSHDLKRLG----RFENYRGFLFGSLSETVPELSD----YLGETRVIIDQMVDQAPLGLEVLRGSSSYVYDGNWKLQIENGAD-GYHVSSVHWNYSATMGRRNYEAE 642 +T+P ++ E++ IF GW Q+ E N YFT +G +++RD +G +H N C HR ++L G K F CP+HGW + G L K AK + + D K LG + + F+ SL ++ E D +LG + D L+ + S + + NWK+ +N D YHV H Y+ + Y+ + Sbjct: 102 YTEPAFYSHELERIFYKGWQVAGISDQIKEPNQYFTGSLGNVEYLVSRDGEGKVHAFHNVCTHRASILA-CGSGKKSCFVCPYHGWVYGMDGSLAKASKAKP---------EQNLDPKELGLVPLKVAVWGPFVLISLDRSLEEGGDVGTEWLGTSAE--DVKAHAFDPSLQFIH-RSEFPMESNWKIFSDNYLDSSYHVPYAHKYYATELNFDTYDTQ 307
BLAST of EY730689 vs. ExPASy Swiss-Prot
Match: CHMO_BETVU (Choline monooxygenase, chloroplastic OS=Beta vulgaris GN=CMO PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.062e-16 Identity = 61/219 (27.85%), Postives = 95/219 (43.38%), Query Frame = -3 Query: 13 FTDPDLFALEMKHIFEGGWVYLAHESQVPEINDYFTTWIGRQPVVITRDKKGTLHGLVNACAHRGAMLCRRKQGNKGSFTCPFHGWTFSNAGKLLKVKDAKTGAYPDSFDCDGSHDLKRLG----RFENYRGFLFGSLSETVPELSD----YLGETRVIIDQMVDQAPLGLEVLRGSSSYVYDGNWKLQIENGAD-GYHVSSVHWNYSATMGRRNYEAE 642 +T+P ++ E++ IF GW + QV E N YFT +G +++RD +G LH N C HR ++L G K F CP+HGW + G L K A + D K LG + + F+ SL ++ +D ++G++ + L S + + NWK+ +N D YHV H Y+A + Y E Sbjct: 109 YTEPAFYSHELERIFYKGWQVAGYSEQVKEKNQYFTGSLGNVEYLVSRDGQGELHAFHNVCTHRASILA-CGSGKKSCFVCPYHGWVYGLDGSLAKASKATE---------TQNLDPKELGLAPLKVAEWGPFILISLDRSLDANADVGTEWIGKSAEDVKAHAFDPNL---KFTHRSEFPMECNWKVFCDNYLDSSYHVPYAHKYYAAELDFDTYNTE 314
BLAST of EY730689 vs. ExPASy Swiss-Prot
Match: CHMO_ATRHO (Choline monooxygenase, chloroplastic OS=Atriplex hortensis GN=CMO PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.062e-16 Identity = 63/217 (29.03%), Postives = 94/217 (43.32%), Query Frame = -3 Query: 13 FTDPDLFALEMKHIFEGGWVYLAHESQVPEINDYFTTWIGRQPVVITRDKKGTLHGLVNACAHRGAMLCRRKQGNKGSFTCPFHGWTFSNAGKLLKVKDA--KTGAYPDSFDCDGSHDLKRLGRFENYRGFLFGSLSETVPEL----SDYLGETRVIIDQMVDQAPLGLEVLRGSSSYVYDGNWKLQIENGAD-GYHVSSVHWNYSATMGRRNYEAE 642 +T+P +A E+ IF GW + QV E N YFT +G ++ RD +G +H N C HR ++L G K F CP+HGW + G L K A + PD G LK + F+ SL + E+ S++LG D L+ + S + + NWK+ +N D YHV H Y+ + Y+ + Sbjct: 103 YTEPAFYAHELDRIFYKGWQVAGYSDQVKEANQYFTGTLGNVEYLVCRDGEGKVHAFHNVCTHRASILA-CGSGKKSCFVCPYHGWVYGMNGSLTKASKATPEQSLNPDEL---GLVPLK----VAVWGPFILISLDRSSREVGDVGSEWLGSCAE--DVKAHAFDPNLQFI-NRSEFPIESNWKIFSDNYLDSSYHVPYAHKYYATELDFDTYQTD 308 The following BLAST results are available for this feature:
BLAST of EY730689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY730689 ID=EY730689; Name=EY730689; organism=Citrus sinensis; type=EST; length=836bpback to top |