EY755336

Overview
NameEY755336
Unique NameEY755336
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755336 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 48/161 (29.81%), Postives = 75/161 (46.58%), Query Frame = 1
Query:   40 GALQVIATGVTTWLADKAGRRALLIISSVGMTVSILIVAV----SFFVKGFVSDDSSCYSILDIFSVIGVVAMVVTFSLGMGPIPWVIMSEILPINIKGLAGSVATLANWLTVWLITMTANLLLNWSGGGTFAIYTLVSAFTVAFVSIWVPETKGKTLEEI 510
            G + V AT V+ +  DK GRR L +   V M +   IVA      F V G   D    Y+++    V+ +   V  F+   GP+ W++ SEI P+ I+  A SV    N    +++     ++L     G F  ++        FV  ++PETKG  +EE+
Sbjct:  330 GLVNVFATMVSIYGVDKWGRRFLFLEGGVQMLICQAIVAACIGAKFGVDGAPGDLPQWYAVV---VVLFICIYVSGFAWSWGPLGWLVPSEIFPLEIRSAAQSVNVSVNMFFTFVVAQVFLIMLCHLKFGLFIFFSFFVLIMSIFVYYFLPETKGIPIEEM 487          
BLAST of EY755336 vs. ExPASy Swiss-Prot
Match: GTR7_HUMAN (Solute carrier family 2, facilitated glucose transporter member 7 OS=Homo sapiens GN=SLC2A7 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 45/167 (26.95%), Postives = 77/167 (46.11%), Query Frame = 1
Query:   16 SDVATLGLGALQVIATGVTTWLADKAGRRALLIISSVGMTVSILIVAVSFFVKGFVSDDSSCYSILDIFSVIGVVAMVVTFSLGMGPIPWVIMSEILPINIKGLAGSVATLANWLTVWLITMTANLLLNWSGGGTFAIYTLVSAFTVAFVSIWVPETKGKTLEEIQR 516
            S   T+G G + ++ T  +  L ++ GRR LL+        + L++ V    +  V +       L    +I V A +   S+G  P+P V+ +EI   + +  A  V    +WLT ++I      +    G  +F I+  +   T  ++ + +PETKGKT  EI R
Sbjct:  320 SQYVTVGSGVVNIVMTITSAVLVERLGRRHLLLAGYGICGSACLVLTVVLLFQNRVPE-------LSYLGIICVFAYIAGHSIGPSPVPSVVRTEIFLQSSRRAAFMVDGAVHWLTNFIIGFLFPSIQEAIGAYSFIIFAGICLLTAIYIYVVIPETKGKTFVEINR 479          
BLAST of EY755336 vs. ExPASy Swiss-Prot
Match: GTR5_PONAB (Solute carrier family 2, facilitated glucose transporter member 5 OS=Pongo abelii GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 43/163 (26.38%), Postives = 80/163 (49.08%), Query Frame = 1
Query:   28 TLGLGALQVIATGVTTWLADKAGRRALLIISSVGMTVSILIVAVSFFVKGFVSDDSSCYSILDIFSVIGVVAMVVTFSLGMGPIPWVIMSEILPINIKGLAGSVATLANWLTVWLITMTANLLLNWSGGGTFAIYTLVSAFTVAFVSIWVPETKGKTLEEIQR 516
            T G GA+ V+ T    ++ +  GRR LL++       SI +VA           D+   S +   S++ V++ V+  +LG  PIP ++++EI   + +  A  V    +WL+ + + +    +    G  +F ++ ++   T  ++ + VPETK KT  EI +
Sbjct:  318 TAGTGAVNVVMTFCAVFVVELLGRRLLLLLG-----FSICLVACCVLTAALALQDT--VSWMPYISIVCVISYVIGHALGPSPIPALLITEIFLQSSRPSAFMVGGSVHWLSNFTVGLIFPFIQEGLGPYSFIVFAVICLLTTIYIFLIVPETKAKTFIEINQ 473          
The following BLAST results are available for this feature:
BLAST of EY755336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
STC_RICCO6.869e-1129.81Sugar carrier protein C OS=Ricinus communis GN=STC... [more]
GTR7_HUMAN8.972e-1126.95Solute carrier family 2, facilitated glucose trans... [more]
GTR5_PONAB8.972e-1126.38Solute carrier family 2, facilitated glucose trans... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-027-A09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755336 ID=EY755336; Name=EY755336; organism=Citrus sinensis; type=EST; length=728bp
CCACGCGTCCGATCAAGTGATGTGGCTACATTAGGACTTGGTGCTCTTCA
GGTCATCGCTACTGGAGTGACTACATGGTTGGCGGACAAAGCAGGTCGCC
GAGCTCTACTTATTATTTCCTCTGTTGGAATGACTGTGAGCATCCTAATT
GTTGCTGTTTCATTCTTCGTAAAGGGTTTTGTATCTGACGATTCTAGTTG
TTATAGTATATTGGACATATTTTCAGTCATTGGAGTTGTGGCCATGGTAG
TTACATTCTCTCTGGGAATGGGGCCCATTCCTTGGGTTATCATGTCTGAG
ATTCTTCCAATCAATATAAAGGGTCTTGCTGGAAGTGTGGCTACCCTTGC
CAACTGGTTAACTGTCTGGCTAATTACAATGACTGCAAACTTACTCTTGA
ATTGGAGTGGCGGAGGAACCTTTGCAATATACACTCTTGTAAGTGCTTTC
ACTGTAGCATTTGTGAGCATTTGGGTCCCGGAGACTAAAGGGAAAACTCT
GGAAGAAATTCAGCGGTCACTTAGATGAGGCTTCTTCTCTTTTATTTGTA
CTCTATTGTTTCTTTCGTACCTTCCTTTTTTTCTCTTGAAGCAGCCAATT
TCTGCTATTTCTATTTTGAAATGATCCTCAGATATTATGACATAAAGTTT
TTGTTAGCAAATCAGCTTTAATGAAGGCATGTTTTCGCCCAGCAATTTGA
GCTTTGACTTGTATTTGCCTNNNNNAAA
back to top