EY730302

Overview
NameEY730302
Unique NameEY730302
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY730302 vs. ExPASy Swiss-Prot
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 40/132 (30.30%), Postives = 58/132 (43.94%), Query Frame = 3
Query:  174 SEKMKIQCDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATGI-----RVALSSSCSKDAERNISEPPNQ 554
            S   ++ CD C    A + C AD A LC  CD +VH AN L+ KH R  +         CD C  +   + C  D  + C++CD  +H   S+S  H R    G       + L++    D E+   +  NQ
Sbjct:    2 SSSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQI---------CDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGLDLEQGRKDEENQ 124          
BLAST of EY730302 vs. ExPASy Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 34/99 (34.34%), Postives = 48/99 (48.48%), Query Frame = 3
Query:  189 IQCDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQRFLATG 485
            + C+ C    A + C AD A LC  CD  VH+AN L+ KH R  +         CD C ++   + C  D  + C++CD  +H   S SA H+R    G
Sbjct:   10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI---------CDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEG 99          
BLAST of EY730302 vs. ExPASy Swiss-Prot
Match: COLX_ARATH (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana GN=At1g68190 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11
Identity = 33/98 (33.67%), Postives = 50/98 (51.02%), Query Frame = 3
Query:  177 EKMKIQCDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPPCDICQEKAAFIFCVEDRALFCKDCDEPIHSPGSLSANHQR 470
            E M+  C+ C+   A V C AD A LC  CD +VH+AN L+ +H R +L         CD C+ +   + C + +   C  C++  H  G  S+ H+R
Sbjct:    8 ENMERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL---------CDSCKNQPCVVRCFDHKMFLCHGCNDKFHGGG--SSEHRR 94          
The following BLAST results are available for this feature:
BLAST of EY730302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
COL15_ARATH8.038e-1230.30Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsi... [more]
COL14_ARATH8.038e-1234.34Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsi... [more]
COLX_ARATH3.989e-1133.67Putative zinc finger protein At1g68190 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-028-C08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY730302 ID=EY730302; Name=EY730302; organism=Citrus sinensis; type=EST; length=852bp
CACGCGTCCGTTTCTTTTCTTTTCTTTCCTTTCCTTTCTCCACTGTAGCT
CCAGATTTTCTTTAAAGGGCTATTGGGATTTTCTCTTCAAAAGAAGTTTC
AAGGATGAAAATTTAATCTTGAGTTTGAATAGATTGGTTATTTTTCCTTT
TATATGTGTAAAAATATATAAAGAGTGAAAAGATGAAGATACAGTGTGAT
GTGTGTGAGAGAGCTCCAGCAACAGTGATTTGCTGTGCAGATGAGGCTGC
TTTGTGTGCTAAATGTGATGTTGAAGTTCACGCAGCAAACAAGCTAGCTA
GCAAGCACCAGAGGCTTCTTCTTCAGTGTCTTTCCAATAAGCTTCCTCCA
TGTGATATATGCCAAGAAAAGGCAGCTTTCATTTTCTGTGTGGAAGACAG
AGCACTCTTCTGTAAGGACTGTGATGAACCTATCCATTCACCTGGTAGTC
TTTCTGCTAACCATCAGAGGTTTTTGGCCACCGGAATCCGAGTAGCCTTA
AGCTCTAGTTGTTCCAAAGATGCTGAAAGGAATATATCTGAGCCACCAAA
TCAGCAAGCATCACAAACTTCAGTAAAAATGCCTACACAGCAATCTTCGG
GCATCTCATCTCCTTGGGCCGTGGACGACTTCTTACAATTCTCAGATTTT
GAATCCTCCGGAAAGAAAGAGCAACTCGAGTTTGGAGAGCTTGAATGGAT
AGCAGACATGGGAATATTCAACGACCAACTTCCTCAGGAGGCTCTANCAG
CTGCTGAAGTACCTCAACTCCCGGTGTCCCAGTCCAACAACTTAATATCA
TCATACAGGCCCACAAAATTCAATATGNCCATACAGAAGCCAGGATTGAG
AT
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