EY755269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY755269 vs. ExPASy Swiss-Prot
Match: CNG17_ARATH (Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana GN=CNGC17 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 4.998e-30 Identity = 61/175 (34.86%), Postives = 100/175 (57.14%), Query Frame = 2 Query: 95 KKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTENGEGNE 613 ++VP F C+R+ + ++ ++REGD + M+FI+RGR++ + G + +L PG F G+ELLSW L LP+S+ T + +EAF L A++L+++ + FR + +++L+ T R+YS +WRTWAA IQ AWRRY+ R ++ E+ E E Sbjct: 477 RRVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGDLISEMLFIIRGRLESSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTLNLPSSTRTVRALVEVEAFALRAEDLKFVANQFR-RLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKRRVMENNLTAIESMENEE 650 HSP 2 Score: 36.1946 bits (82), Expect = 4.998e-30 Identity = 15/28 (53.57%), Postives = 22/28 (78.57%), Query Frame = 3 Query: 18 DEMELIKDLPEGLRRGIKRYLCLDLIKK 101 DE L++ LP LRR I+R+LCLDL+++ Sbjct: 451 DEEVLLQSLPTDLRRDIQRHLCLDLVRR 478
BLAST of EY755269 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 6.509e-30 Identity = 59/161 (36.65%), Postives = 94/161 (58.39%), Query Frame = 2 Query: 95 KKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTR 571 ++VPLF C R++P ++++ ++REGDPV M+FI+RGR++ + G S+L+ G F G+ELL+W L LP+S+ T + +EAF L ++ L+++ FR + + +++ T R+YS WRTWAA IQ AWRRY R + Sbjct: 494 RRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELKFVASQFR-RLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRYCKRKK 653 HSP 2 Score: 36.1946 bits (82), Expect = 6.509e-30 Identity = 15/28 (53.57%), Postives = 23/28 (82.14%), Query Frame = 3 Query: 18 DEMELIKDLPEGLRRGIKRYLCLDLIKK 101 DE L+++LP+ LRR IKR+LCL L+++ Sbjct: 468 DEEYLVQNLPKDLRRDIKRHLCLALVRR 495
BLAST of EY755269 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.409e-28 Identity = 58/159 (36.48%), Postives = 93/159 (58.49%), Query Frame = 2 Query: 95 KKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMR 565 ++VPLF C+R++P + ++ ++REGDPV M+FI+RG + + G + ++ PG F G+ELL+W L + LP+S+ T + +EAF L A++L+++ FR + ++L+ R+YS WRTWAA IQ AWRR+R R Sbjct: 467 RRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCLIGPGDFCGEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAEDLQFVASQFR-RLHTKQLRHKFRFYSHQWRTWAACFIQAAWRRHRKR 624 HSP 2 Score: 34.2686 bits (77), Expect = 3.409e-28 Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 3 Query: 18 DEMELIKDLPEGLRRGIKRYLCLDLIKK 101 DE L+ LP LRR IKR+LC DL+++ Sbjct: 441 DEEALLISLPLDLRRDIKRHLCFDLVRR 468
BLAST of EY755269 vs. ExPASy Swiss-Prot
Match: CNG16_ARATH (Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana GN=CNGC16 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.517e-28 Identity = 59/159 (37.11%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 95 KKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMR 565 ++VP F C+R+ P + +KD +IREGDPV M+FI+RG+++ + G + L PG F G+ELL+W L LP S+ T + +EAF L A++L+++ + FR + +++L+ RYYS WR W IQ AWRRY R Sbjct: 453 RRVPFFAQMDDQLLDAICERLVPSLNTKDTYVIREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPNINHNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFR-RLHSKKLQHAFRYYSHQWRAWGTCFIQAAWRRYMKR 610 HSP 2 Score: 31.187 bits (69), Expect = 7.517e-28 Identity = 13/28 (46.43%), Postives = 21/28 (75.00%), Query Frame = 3 Query: 18 DEMELIKDLPEGLRRGIKRYLCLDLIKK 101 DE +++ LP LRR I+R+LCL L+++ Sbjct: 427 DEEAILRALPLDLRRQIQRHLCLALVRR 454
BLAST of EY755269 vs. ExPASy Swiss-Prot
Match: CNG18_ARATH (Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.646e-26 Identity = 55/170 (32.35%), Postives = 91/170 (53.53%), Query Frame = 2 Query: 95 KKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTEN 598 ++VP F C + + + I REGDPV M+F++RG+I+ + G ++ L PG F G+ELL+W L LP+S+ + + +EAF L A++L+++ F+ + +++L+ RYYS WR W A +Q AWRRY+ R +S+ E+ Sbjct: 445 RRVPFFSQMDDQLLDAICGCLVSSLSTAGTYIFREGDPVNEMLFVIRGQIESSTTNGGRSGFFNSTTLRPGDFCGEELLTWALMPNSTLNLPSSTRSVRALSEVEAFALSAEDLKFVAHQFK-RLQSKKLQHAFRYYSHQWRAWGACFVQSAWRRYKRRKLAKELSLHES 613 HSP 2 Score: 32.7278 bits (73), Expect = 6.646e-26 Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 3 Query: 18 DEMELIKDLPEGLRRGIKRYLCLDLIKK 101 DE ++ LP LRR I+R+LCL L+++ Sbjct: 419 DEESILHSLPTDLRREIQRHLCLSLVRR 446
BLAST of EY755269 vs. ExPASy Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 3.698e-23 Identity = 61/195 (31.28%), Postives = 98/195 (50.26%), Query Frame = 2 Query: 95 KKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTE-------NGEGNESNRLMRYAAMFMS 652 KKVP F C R++ ++Y++ I+REG+PV M+FI+RG + + G + L G F GD LL+W L P + P SS T + +E F L A +L+++ +R + +++L+ R+YS W+TWAA IQ AW+R+ R + E + + N+L AA++ S Sbjct: 473 KKVPWFQAMDDRLLDALCARLKTVLYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLVAGDFCGD-LLTWAL-DPLSSQFPISSRTVQALTEVEGFLLSADDLKFVATQYR-RLHSKQLRHMFRFYSVQWQTWAACFIQAAWKRHCRRKLSKALREEEGKLHNTLQNDDSGGNKLNLGAAIYAS 664 HSP 2 Score: 35.039 bits (79), Expect = 3.698e-23 Identity = 15/28 (53.57%), Postives = 21/28 (75.00%), Query Frame = 3 Query: 18 DEMELIKDLPEGLRRGIKRYLCLDLIKK 101 +E L+ LP+ LR+ IKR+LCL L+KK Sbjct: 447 EEEALLSSLPKDLRKDIKRHLCLKLLKK 474
BLAST of EY755269 vs. ExPASy Swiss-Prot
Match: CNG11_ARATH (Cyclic nucleotide-gated ion channel 11 OS=Arabidopsis thaliana GN=CNGC11 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 8.099e-19 Identity = 52/159 (32.70%), Postives = 83/159 (52.20%), Query Frame = 2 Query: 95 KKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMR 565 KKVPL C R++ + Y++ I+REG+PV M+FI+RG + + G + L G GD LL+W L + P SS T + +E F + A +L+++ +R + +++L+ R+YS W+TWAA IQ AW+R+ R Sbjct: 431 KKVPLLQAMDDQLLDALCARLKTVHYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLIAGDSCGD-LLTWAL-YSLSSQFPISSRTVQALTEVEGFVISADDLKFVATQYR-RLHSKQLQHMFRFYSLQWQTWAACFIQAAWKRHCRR 586 HSP 2 Score: 29.6462 bits (65), Expect = 8.099e-19 Identity = 14/28 (50.00%), Postives = 19/28 (67.86%), Query Frame = 3 Query: 18 DEMELIKDLPEGLRRGIKRYLCLDLIKK 101 +E L++ LP+ LR KRYL L L+KK Sbjct: 405 EEEALLRSLPKDLRLETKRYLFLKLLKK 432
BLAST of EY755269 vs. ExPASy Swiss-Prot
Match: CNG12_ARATH (Probable cyclic nucleotide-gated ion channel 12 OS=Arabidopsis thaliana GN=CNGC12 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.368e-18 Identity = 48/142 (33.80%), Postives = 74/142 (52.11%), Query Frame = 2 Query: 146 CDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLSKGMVATSV--LEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMR 565 CDRV+ + Y + I+REG PV M+ + RG++K + V + L+ G G+ L + RLP S+ T + +E F L ++++I H F ++L+RT R YS WR+WAA IQ AWR++ R Sbjct: 449 CDRVKSVFYLANSFIVREGHPVEEMLIVTRGKLKSTTGSHEMGVRNNCCDLQDGDICGELLFNG-------SRLPTSTRTVMTLTEVEGFILLPDDIKFIASHLNV-FQRQKLQRTFRLYSQQWRSWAAFFIQAAWRKHCKR 582 HSP 2 Score: 30.4166 bits (67), Expect = 1.368e-18 Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 3 Query: 18 DEMELIKDLPEGLRRGIKRYLCLDLIKK 101 +E L++ LP+ LR KRYL LD++K+ Sbjct: 405 EEEALLRSLPKDLRLETKRYLYLDMLKR 432
BLAST of EY755269 vs. ExPASy Swiss-Prot
Match: CNG20_ARATH (Probable cyclic nucleotide-gated ion channel 20, chloroplastic OS=Arabidopsis thaliana GN=CNGC20 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.601e-13 Identity = 53/167 (31.74%), Postives = 79/167 (47.31%), Query Frame = 2 Query: 95 KKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLSKGMVATSVLEPGGFLGDELLSWCLRRPFID------RLPA----SSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMR 565 KKV +F +R++ Y ++ G V +MVFIVRG + +S+ + + E G G+ELL+WCL R ++ R+P+ SS C+ ++EAF L +L +T F + R++ RY S WR AA IQ AWR R R Sbjct: 589 KKVRIFSLMDEPILDAIRERLKQRTYIGSSTVLHRGGLVEKMVFIVRGEM---ESIGEDGSVLPLYE-GDVCGEELLTWCLERSSVNPDGTRIRMPSKGLLSSRNVRCVTNVEAFSLSVADLEDVTSLFSRFLRSHRVQGAIRYDSPYWRLRAARQIQVAWRYRRRR 751
BLAST of EY755269 vs. ExPASy Swiss-Prot
Match: CNG19_ARATH (Putative cyclic nucleotide-gated ion channel 19 OS=Arabidopsis thaliana GN=CNGC19 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11 Identity = 52/165 (31.52%), Postives = 76/165 (46.06%), Query Frame = 2 Query: 95 KKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLSKGMVATSVLEPGGFLGDELLSWCLRRPFID----RLP----ASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMR 565 KKV +F +R++ Y + ++ V +MVFIVRG ++ G V L G G+ELL+WCL D ++P S+ C+ ++EAF L +L +T F + R++ RY S WR AA+ IQ AW RYR R Sbjct: 556 KKVRIFSLMDESVLDSIRERLKQRTYIRSSTVLHHRGLVEKMVFIVRGEMESIGE--DGSVLP--LSEGDVCGEELLTWCLSSINPDGTRIKMPPKGLVSNRNVRCVTNVEAFSLSVADLEDVTSLFSRFLRSHRVQGAIRYESPYWRLRAAMQIQVAW-RYRKR 715 The following BLAST results are available for this feature:
BLAST of EY755269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY755269 ID=EY755269; Name=EY755269; organism=Citrus sinensis; type=EST; length=741bpback to top |