EY755250

Overview
NameEY755250
Unique NameEY755250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1B2_BOMMO (Elongation factor 1-beta' OS=Bombyx mori PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.565e-26
Identity = 58/87 (66.67%), Postives = 68/87 (78.16%), Query Frame = 2 
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDMK++E  VR+++MEGLLWGASKL PVGYGI KLQIM  I DD VSVD L E+    +   ++VQS DI AFNKI
Sbjct:  139 ILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEK---IQEFEDFVQSVDIAAFNKI 222
[Close]
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1B_XENTR (Elongation factor 1-beta OS=Xenopus tropicalis GN=eef1b PE=2 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 2.131e-25
Identity = 58/87 (66.67%), Postives = 67/87 (77.01%), Query Frame = 2 
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM KLEE VRS+QMEGL+WGASKL PVGYGIKKLQI   + DD V  D L EE++      ++VQS D+ AFNKI
Sbjct:  145 ILLDVKPWDDETDMAKLEECVRSIQMEGLVWGASKLVPVGYGIKKLQIQCVVEDDKVGTDVL-EENI--TAFEDFVQSMDVAAFNKI 228
[Close]
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1B_DROME (Probable elongation factor 1-beta OS=Drosophila melanogaster GN=Ef1beta PE=1 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 2.131e-25
Identity = 58/87 (66.67%), Postives = 68/87 (78.16%), Query Frame = 2 
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            VLLDVKPWDDETDMK++E  VR+++M+GLLWGASKL PVGYGI KLQIM  I DD VS+D L E+    E   ++VQS DI AFNKI
Sbjct:  139 VLLDVKPWDDETDMKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSIDLLQEK---IEEFEDFVQSVDIAAFNKI 222
[Close]
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1D_XENLA (Elongation factor 1-delta OS=Xenopus laevis GN=eef1d PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.783e-25
Identity = 59/87 (67.82%), Postives = 66/87 (75.86%), Query Frame = 2 
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM KLEE VR+VQM+GL+WG+SKL PVGYGIKKLQI   + DD V  D L EE    E   +YVQS DI AFNKI
Sbjct:  182 ILLDVKPWDDETDMAKLEECVRTVQMDGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFE---DYVQSVDIAAFNKI 265
[Close]
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1B_BOVIN (Elongation factor 1-beta OS=Bos taurus GN=EEF1B PE=2 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 2 
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+SKL PVGYGIKKLQI   + DD V  D ++EE +     +EYVQS D+ AFNKI
Sbjct:  142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD-MLEEQI--TAFDEYVQSMDVAAFNKI 225
[Close]
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1B_XENLA (Elongation factor 1-beta OS=Xenopus laevis GN=eef1b PE=1 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 1.381e-24
Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 2 
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM KLEE +RS+QM+GLLWG+SKL PVGYGIKKLQI   + DD V  D L E+    E   ++VQS D+ AFNKI
Sbjct:  144 ILLDVKPWDDETDMGKLEECLRSIQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDVLEEKITAFE---DFVQSMDVAAFNKI 227
[Close]
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1B_MOUSE (Elongation factor 1-beta OS=Mus musculus GN=Eef1b PE=1 SV=5)

HSP 1 Score: 112.849 bits (281), Expect = 1.804e-24
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 2 
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+SKL PVGYGIKKLQI   + DD V  D L E+    E   +YVQS D+ AFNKI
Sbjct:  142 ILLDVKPWDDETDMTKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFE---DYVQSMDVAAFNKI 225
[Close]
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1B_HUMAN (Elongation factor 1-beta OS=Homo sapiens GN=EEF1B2 PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 1.804e-24
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 2 
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+SKL PVGYGIKKLQI   + DD V  D L E+    E   +YVQS D+ AFNKI
Sbjct:  142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFE---DYVQSMDVAAFNKI 225
[Close]
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1B_CHICK (Elongation factor 1-beta OS=Gallus gallus GN=EEF1B PE=2 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 1.804e-24
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 2 
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+SKL PVGYGIKKLQI   + DD V  D L E+    E   +YVQS D+ AFNKI
Sbjct:  142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFE---DYVQSMDVAAFNKI 225
[Close]
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1B_RABIT (Elongation factor 1-beta OS=Oryctolagus cuniculus GN=EEF1B PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 2 
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+SKL PVGYGIKKLQI   + DD V  D L E+    E   +YVQS D+ AFNKI
Sbjct:  142 ILLDVKPWDDETDMVKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFE---DYVQSMDVAAFNKI 225
The following BLAST results are available for this feature:
BLAST of EY755250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
EF1B2_BOMMO9.565e-2666.67Elongation factor 1-beta' OS=Bombyx mori PE=1 SV=2[more]
EF1B_XENTR2.131e-2566.67Elongation factor 1-beta OS=Xenopus tropicalis GN=... [more]
EF1B_DROME2.131e-2566.67Probable elongation factor 1-beta OS=Drosophila me... [more]
EF1D_XENLA2.783e-2567.82Elongation factor 1-delta OS=Xenopus laevis GN=eef... [more]
EF1B_BOVIN8.097e-2564.37Elongation factor 1-beta OS=Bos taurus GN=EEF1B PE... [more]
EF1B_XENLA1.381e-2464.37Elongation factor 1-beta OS=Xenopus laevis GN=eef1... [more]
EF1B_MOUSE1.804e-2464.37Elongation factor 1-beta OS=Mus musculus GN=Eef1b ... [more]
EF1B_HUMAN1.804e-2464.37Elongation factor 1-beta OS=Homo sapiens GN=EEF1B2... [more]
EF1B_CHICK1.804e-2464.37Elongation factor 1-beta OS=Gallus gallus GN=EEF1B... [more]
EF1B_RABIT2.356e-2464.37Elongation factor 1-beta OS=Oryctolagus cuniculus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-025-H09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755250 ID=EY755250; Name=EY755250; organism=Citrus sinensis; type=EST; length=715bp
CCACGCGTCCGGTGTCACTGTAGAGGGATCTGCTCCTGTTGCTACTCCCC
CGGTAGCTGACTCAAAGGCAGCAGCTCCTGATGATGACGACGATGATGTG
GATCTATTTGGTGAGGAGACAGAAGAGGAAAAGAAGGCTGCCGAGGCACG
CGCAGCTTCCGTCAAAGCATCAGCCAAAAAGAAAGAATCTGGCAAGTCAT
CAGTTCTATTGGATGTGAAGCCTTGGGATGATGAGACTGACATGAAGAAG
CTTGAGGAAGCAGTAAGAAGTGTTCAGATGGAAGGATTACTCTGGGGAGC
CAGCAAACTTGCACCTGTTGGATATGGTATCAAGAAATTGCAAATAATGC
TTACAATTGTGGATGACTTGGTGTCTGTTGACACCCTCATTGAGGAACAC
CTGCTGGAAGAACCAATTAATGAATATGTCCAGAGCTGTGATATTGTAGC
CTTCAACAAAATATAATTTGTGGATCCTTTGGCAAAGTGGGTGCTAGAGA
GGCTTCCGGGGATTTTGTCTTGGATAATGATCATAGCAAAGTGATATTTA
TTTTAAAATATTTATTTTTGTTTCAGGAGTCTTGTGTGTTCCATTATGGA
TTTGTTCTTCTATGGATGCTCTCTCTTTGGAGTTTTTTACTGTGACTGAA
GTTGATATGCCATATCTGCAATGCAGAACTCTTTAGAGCATTAAAAAAAA
AAAAAAAAAAAAAAA
back to top