EY755250

Overview
NameEY755250
Unique NameEY755250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1D_RABIT (Elongation factor 1-delta OS=Oryctolagus cuniculus GN=EEF1D PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.019e-24
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 2
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM +LE  VRSVQ++GL+WGASKL PVGYGI+KLQI   + DD V  D L+EE + +    E+VQS DI AFNKI
Sbjct:  197 ILLDVKPWDDETDMARLEACVRSVQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDIAAFNKI 280          
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1D_RAT (Elongation factor 1-delta OS=Rattus norvegicus GN=Eef1d PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 2
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM +LE  VRS+Q++GL+WGASKL PVGYGI+KLQI   + DD V  D L+EE + +    E+VQS DI AFNKI
Sbjct:  198 ILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDIAAFNKI 281          
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1D_MACFA (Elongation factor 1-delta OS=Macaca fascicularis GN=EEF1D PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 2
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM +LE  VRS+Q++GL+WGASKL PVGYGI+KLQI   + DD V  D L+EE + +    E+VQS DI AFNKI
Sbjct:  198 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDIAAFNKI 281          
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1D_HUMAN (Elongation factor 1-delta OS=Homo sapiens GN=EEF1D PE=1 SV=5)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 2
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM +LE  VRS+Q++GL+WGASKL PVGYGI+KLQI   + DD V  D L+EE + +    E+VQS DI AFNKI
Sbjct:  198 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDIAAFNKI 281          
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1D_ARTSA (Elongation factor 1-delta OS=Artemia salina PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.953e-24
Identity = 53/87 (60.92%), Postives = 65/87 (74.71%), Query Frame = 2
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLD+KPWDDETDM  +E  VRS+ M+GL+WGASKL PV +G+KKLQI   + DD VSVD L+E+    E   +YVQS DI AFNKI
Sbjct:  154 ILLDIKPWDDETDMGAMEREVRSIAMDGLIWGASKLVPVAFGVKKLQISCVVEDDKVSVDELVEK---IEAFEDYVQSVDIAAFNKI 237          
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1D_BOVIN (Elongation factor 1-delta OS=Bos taurus GN=EEF1D PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.527e-23
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 2
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM +LE  VRSVQ++GL+WG+SKL PVGYGI+KLQI   + DD V  D L EE    E   E+VQS DI AFNKI
Sbjct:  197 ILLDVKPWDDETDMAQLEACVRSVQLDGLVWGSSKLVPVGYGIRKLQIQCVVEDDKVGTDQLEEEITKFE---EHVQSVDIAAFNKI 280          
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1D_MOUSE (Elongation factor 1-delta OS=Mus musculus GN=Eef1d PE=1 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 2.605e-23
Identity = 54/87 (62.07%), Postives = 67/87 (77.01%), Query Frame = 2
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            +LLDVKPWDDETDM +LE  VRS+Q++GL+WGASKL PVGYGI+KLQI   + DD V  D L+EE + +    E+VQS DI AF+KI
Sbjct:  198 ILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDIAAFDKI 281          
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1B2_CAEEL (Probable elongation factor 1-beta/1-delta 2 OS=Caenorhabditis elegans GN=Y41E3.10 PE=1 SV=4)

HSP 1 Score: 108.612 bits (270), Expect = 3.402e-23
Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 2
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            V+LDVKPWDDETD+ ++E+ VRS++M+GL+WG +KL P+GYGIKKLQI+  I D  VSVD LIE+  +     ++VQS DIVAFNKI
Sbjct:  179 VILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEK--ITGDFEDHVQSVDIVAFNKI 263          
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1B1_CAEEL (Probable elongation factor 1-beta/1-delta 1 OS=Caenorhabditis elegans GN=F54H12.6 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.402e-23
Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 2
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            V+LDVKPWDDETD+ ++E+ VRS++M+GL+WG +KL P+GYGIKKLQI+  I D  VSVD LIE+  +     ++VQS DIVAFNKI
Sbjct:  129 VILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEK--ITGDFEDHVQSVDIVAFNKI 213          
BLAST of EY755250 vs. ExPASy Swiss-Prot
Match: EF1B_ARTSA (Elongation factor 1-beta OS=Artemia salina PE=1 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 7.579e-23
Identity = 52/87 (59.77%), Postives = 68/87 (78.16%), Query Frame = 2
Query:  203 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 463
            V+LD+KPWDDETDM ++E+ VRSVQM+GL+WGA+KL P+ YGIKKL IM  + DD VS+D L +E + E    ++VQS DI AFNK+
Sbjct:  124 VILDIKPWDDETDMAEMEKLVRSVQMDGLVWGAAKLIPLAYGIKKLSIMCVVEDDKVSIDEL-QEKISE--FEDFVQSVDIAAFNKV 207          
The following BLAST results are available for this feature:
BLAST of EY755250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
EF1D_RABIT4.019e-2464.37Elongation factor 1-delta OS=Oryctolagus cuniculus... [more]
EF1D_RAT6.855e-2463.22Elongation factor 1-delta OS=Rattus norvegicus GN=... [more]
EF1D_MACFA6.855e-2463.22Elongation factor 1-delta OS=Macaca fascicularis G... [more]
EF1D_HUMAN6.855e-2463.22Elongation factor 1-delta OS=Homo sapiens GN=EEF1D... [more]
EF1D_ARTSA8.953e-2460.92Elongation factor 1-delta OS=Artemia salina PE=1 S... [more]
EF1D_BOVIN1.527e-2364.37Elongation factor 1-delta OS=Bos taurus GN=EEF1D P... [more]
EF1D_MOUSE2.605e-2362.07Elongation factor 1-delta OS=Mus musculus GN=Eef1d... [more]
EF1B2_CAEEL3.402e-2360.92Probable elongation factor 1-beta/1-delta 2 OS=Cae... [more]
EF1B1_CAEEL3.402e-2360.92Probable elongation factor 1-beta/1-delta 1 OS=Cae... [more]
EF1B_ARTSA7.579e-2359.77Elongation factor 1-beta OS=Artemia salina PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-025-H09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755250 ID=EY755250; Name=EY755250; organism=Citrus sinensis; type=EST; length=715bp
CCACGCGTCCGGTGTCACTGTAGAGGGATCTGCTCCTGTTGCTACTCCCC
CGGTAGCTGACTCAAAGGCAGCAGCTCCTGATGATGACGACGATGATGTG
GATCTATTTGGTGAGGAGACAGAAGAGGAAAAGAAGGCTGCCGAGGCACG
CGCAGCTTCCGTCAAAGCATCAGCCAAAAAGAAAGAATCTGGCAAGTCAT
CAGTTCTATTGGATGTGAAGCCTTGGGATGATGAGACTGACATGAAGAAG
CTTGAGGAAGCAGTAAGAAGTGTTCAGATGGAAGGATTACTCTGGGGAGC
CAGCAAACTTGCACCTGTTGGATATGGTATCAAGAAATTGCAAATAATGC
TTACAATTGTGGATGACTTGGTGTCTGTTGACACCCTCATTGAGGAACAC
CTGCTGGAAGAACCAATTAATGAATATGTCCAGAGCTGTGATATTGTAGC
CTTCAACAAAATATAATTTGTGGATCCTTTGGCAAAGTGGGTGCTAGAGA
GGCTTCCGGGGATTTTGTCTTGGATAATGATCATAGCAAAGTGATATTTA
TTTTAAAATATTTATTTTTGTTTCAGGAGTCTTGTGTGTTCCATTATGGA
TTTGTTCTTCTATGGATGCTCTCTCTTTGGAGTTTTTTACTGTGACTGAA
GTTGATATGCCATATCTGCAATGCAGAACTCTTTAGAGCATTAAAAAAAA
AAAAAAAAAAAAAAA
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