EY730059 | Citrus Genome Database

Overview


Name	EY730059
Unique Name	EY730059
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	717

Libraries


Library Name	Type
Sweet orange fruit, development stadium (5 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY730059 vs. ExPASy Swiss-Prot
Match: MAO1_SHIFL (NAD-dependent malic enzyme OS=Shigella flexneri GN=sfcA PE=3 SV=4)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2

Query:    8 SDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIPGTASVVLAGLISAMEFLGGSLSLTQEFLIPLGCPG 316
            +D  Y+G R  R    EY E + EF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDI GTA+V +  LI+A    GG LS  +   +  G  G
Sbjct:  206 NDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAG 307

[Close]

BLAST of EY730059 vs. ExPASy Swiss-Prot
Match: MAO1_SHIF8 (NAD-dependent malic enzyme OS=Shigella flexneri serotype 5b (strain 8401) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2

Query:    8 SDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIPGTASVVLAGLISAMEFLGGSLSLTQEFLIPLGCPG 316
            +D  Y+G R  R    EY E + EF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDI GTA+V +  LI+A    GG LS  +   +  G  G
Sbjct:  206 NDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAG 307

[Close]

BLAST of EY730059 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 2

Query:   11 DEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIPGTASVVLAGLISAMEFLGGSLS 277
            D  Y+G R  R  G+EY+E +  FM AV + + + +LIQFEDFA  NA  +LE+Y   +  FNDDI GTA+V +  L++A +  G  LS
Sbjct:  204 DPMYMGWRHPRIGGEEYSEFIEAFMEAVHRRWPD-VLIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACQAAGTKLS 291

[Close]

BLAST of EY730059 vs. ExPASy Swiss-Prot
Match: MAO1_ESCF3 (NAD-dependent malic enzyme OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2

Query:    8 SDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIPGTASVVLAGLISAMEFLGGSLSLTQEFLIPLGCPG 316
            +D  Y+G R  R    EY E + EF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDI GTA+V +  LI+A    GG LS  +   +  G  G
Sbjct:  206 NDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAG 307

[Close]

BLAST of EY730059 vs. ExPASy Swiss-Prot
Match: MAO1_ECOUT (NAD-dependent malic enzyme OS=Escherichia coli (strain UTI89 / UPEC) GN=sfcA PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2

Query:    8 SDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIPGTASVVLAGLISAMEFLGGSLSLTQEFLIPLGCPG 316
            +D  Y+G R  R    EY E + EF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDI GTA+V +  LI+A    GG LS  +   +  G  G
Sbjct:  206 NDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAG 307

[Close]

BLAST of EY730059 vs. ExPASy Swiss-Prot
Match: MAO1_ECOSM (NAD-dependent malic enzyme OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2

Query:    8 SDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIPGTASVVLAGLISAMEFLGGSLSLTQEFLIPLGCPG 316
            +D  Y+G R  R    EY E + EF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDI GTA+V +  LI+A    GG LS  +   +  G  G
Sbjct:  206 NDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAG 307

[Close]

BLAST of EY730059 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLU (NAD-dependent malic enzyme OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2

Query:    8 SDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIPGTASVVLAGLISAMEFLGGSLSLTQEFLIPLGCPG 316
            +D  Y+G R  R    EY E + EF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDI GTA+V +  LI+A    GG LS  +   +  G  G
Sbjct:  206 NDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAG 307

[Close]

BLAST of EY730059 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLI (NAD-dependent malic enzyme OS=Escherichia coli (strain K12) GN=sfcA PE=3 SV=4)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2

Query:    8 SDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIPGTASVVLAGLISAMEFLGGSLSLTQEFLIPLGCPG 316
            +D  Y+G R  R    EY E + EF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDI GTA+V +  LI+A    GG LS  +   +  G  G
Sbjct:  206 NDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAG 307

[Close]

BLAST of EY730059 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLC (NAD-dependent malic enzyme OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2

Query:    8 SDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIPGTASVVLAGLISAMEFLGGSLSLTQEFLIPLGCPG 316
            +D  Y+G R  R    EY E + EF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDI GTA+V +  LI+A    GG LS  +   +  G  G
Sbjct:  206 NDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAG 307

[Close]

BLAST of EY730059 vs. ExPASy Swiss-Prot
Match: MAO1_ECOL6 (NAD-dependent malic enzyme OS=Escherichia coli O6 GN=sfcA PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 2

Query:    8 SDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIPGTASVVLAGLISAMEFLGGSLSLTQEFLIPLGCPG 316
            +D  Y+G R  R    EY E + EF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDI GTA+V +  LI+A    GG LS  +   +  G  G
Sbjct:  206 NDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAG 307

The following BLAST results are available for this feature:

BLAST of EY730059 vs. ExPASy Swiss-Prot

BLAST of EY730059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133


Match Name	E-value	Identity	Description
MAO1_SHIFL	3.770e-14	42.72	NAD-dependent malic enzyme OS=Shigella flexneri GN...	[more]
MAO1_SHIF8	3.770e-14	42.72	NAD-dependent malic enzyme OS=Shigella flexneri se...	[more]
MAO1_SHEAM	3.770e-14	44.94	NAD-dependent malic enzyme OS=Shewanella amazonens...	[more]
MAO1_ESCF3	3.770e-14	42.72	NAD-dependent malic enzyme OS=Escherichia ferguson...	[more]
MAO1_ECOUT	3.770e-14	42.72	NAD-dependent malic enzyme OS=Escherichia coli (st...	[more]
MAO1_ECOSM	3.770e-14	42.72	NAD-dependent malic enzyme OS=Escherichia coli (st...	[more]
MAO1_ECOLU	3.770e-14	42.72	NAD-dependent malic enzyme OS=Escherichia coli O17...	[more]
MAO1_ECOLI	3.770e-14	42.72	NAD-dependent malic enzyme OS=Escherichia coli (st...	[more]
MAO1_ECOLC	3.770e-14	42.72	NAD-dependent malic enzyme OS=Escherichia coli (st...	[more]
MAO1_ECOL6	3.770e-14	42.72	NAD-dependent malic enzyme OS=Escherichia coli O6 ...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-704-025-A06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY730059 ID=EY730059; Name=EY730059; organism=Citrus sinensis; type=EST; length=717bp
CCACGCGTCCGATGAGTTCTACATTGGGCTCAGGCAGAAGAGGGCTATTG
GACAGGAATATGCTGAACTGCTACATGAATTCATGACAGCTGTGAAGCAG
AATTATGGGGAGAGAATTCTCATTCAGTTTGAAGACTTTGCAAACCACAA
TGCCTTTGATCTGCTTGAAAAATATGGCACTACTCATCTTGTNTTCAATG
ATGATATTCCGGGGACAGCCTCTGTGGTCCTTGCAGGTCTAATTTCAGCC
ATGGAATTTCTTGGAGGGAGCCTTAGCTTGACCCAAGAATTTTTAATTCC
CCTTGGGTGCCCGGGAAAAACTCGGGGCCTTGGAAATTCCCCAAAACCCT
TTCCCCCTTGGAAATTCCCAACCGACAAATTTTCCCCTTTAAAAAAAACC
CCCAAAAAATTTGGGTTTGGGGCTCCAAGGGGGTTGACTCCCCCCCCCCC
CCTTAAAACCCCCCCCAATTTTTAAAAACCCGGGGGCCCCTAAAAAAAAC
CTTGTGTGGGGACTATTATACCCGCCTTTCGGCCCCCCCCCCCCCCTCTT
TTGTGTGGACCCCCGGGGGGGGGGGGCCTTTTTTTACAAAAAATTTTGGG
GGGGGGGGCCCCCCCCCCCTAGGAAACCCCTCCCTTTTTTTTTTTTTTTT
CTCCCCCCCCTTTTGATGGTGGTTTGGGCCCCCCGCAGAAACAACTCTGT
TTTGGGGGCCGGGGCGC