EY729984

Overview
NameEY729984
Unique NameEY729984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729984 vs. ExPASy Swiss-Prot
Match: FENR2_ORYSJ (Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0784700 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.347e-22
Identity = 50/108 (46.30%), Postives = 72/108 (66.67%), Query Frame = 1
Query:   19 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQWNVEVY 342
            + SLLY EEF    ++ P+NFR D A+SREQKN+   KMY+Q ++ EY++E+++LL     ++Y CGL+GM  GI D +  +A   G  W     QLKK++QW+VEVY
Sbjct:  272 TDSLLYDEEFTSYLKQYPDNFRYDKALSREQKNKNAGKMYVQDKIEEYSDEIFKLL-DGGAHIYFCGLKGMMPGIQDTLKKVAEQRGESWEQKLSQLKKNKQWHVEVY 378          
BLAST of EY729984 vs. ExPASy Swiss-Prot
Match: FENR2_PEA (Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Pisum sativum PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.090e-21
Identity = 49/106 (46.23%), Postives = 74/106 (69.81%), Query Frame = 1
Query:   25 SLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQWNVEVY 342
            SLLY +EF K  +  P+NFR + A+SRE+KN+ G KMY+Q ++ EY++E+++LL  +  ++Y CGLRGM  GI + +  +A   G  W +   QLKK++QW+VEVY
Sbjct:  273 SLLYDDEFTKYLKDYPDNFRYNRALSREEKNKNGGKMYVQDKIEEYSDEIFKLL-DNGAHIYFCGLRGMMPGIQETLKRVAEKRGESWEEKLSQLKKNKQWHVEVY 377          
BLAST of EY729984 vs. ExPASy Swiss-Prot
Match: FENR_CHLRE (Ferredoxin--NADP reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PETH PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.410e-21
Identity = 48/108 (44.44%), Postives = 74/108 (68.52%), Query Frame = 1
Query:   19 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQWNVEVY 342
            S + LY EE + + +  P  FRLD+A+SREQ N KG KMYIQ ++ EYA+E+++LL  +  ++Y CGL+GM  GI D++  +A   G+++ ++ + LK   QW+VEVY
Sbjct:  248 SDAKLYDEELQAIAKAYPGQFRLDYALSREQNNRKGGKMYIQDKVEEYADEIFDLL-DNGAHMYFCGLKGMMPGIQDMLERVAKEKGLNYEEWVEGLKHKNQWHVEVY 354          
The following BLAST results are available for this feature:
BLAST of EY729984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
FENR2_ORYSJ8.347e-2246.30Ferredoxin--NADP reductase, root isozyme, chloropl... [more]
FENR2_PEA1.090e-2146.23Ferredoxin--NADP reductase, root isozyme, chloropl... [more]
FENR_CHLRE5.410e-2144.44Ferredoxin--NADP reductase, chloroplastic OS=Chlam... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-024-A02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729984 ID=EY729984; Name=EY729984; organism=Citrus sinensis; type=EST; length=833bp
CCACGCGTCCGCCCGACTAGCAGTTCCCTACTCTACAAGGAGGAGTTTGA
GAAGATGAAGGAGAAGGCCCCGGAAAACTTCAGGCTTGATTTTGCAGTGA
GCAGAGAACAAAAGAATGAGAAGGGTGAGAAGATGTACATTCAAACCCGA
ATGGCTGAATATGCAAATGAGCTGTGGGAATTACTCAAGAAAGATAACAC
TTATGTGTACATGTGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACA
TTATGGTGTCATTGGCTGCTAACGATGGCATTGATTGGCTGGACTACAAA
AAGCAATTGAAGAAATCTGAGCAATGGAATGTTGAAGTCTACTAATGCCT
TACATGTACAAAACATCCCTCACATTTTCATTTTTTTTTCCTTTTTGTCC
CATCGTATGATATTTCCCTCTGCACTGTGTACATAGGTAGACTATTTTCA
AATTTTCTTTGTATTTTTGTCTTTTTTAACGGAGCAATTTACGGCTATTG
TCTCTACAGATATTTATTCTTGAGGGATCATGTATCTTGCAGATATATTT
GGAGGCGATTCAACTTGCGTCATTTTAGCTTTCTGCCATGGACTGACTAT
TGCAGTTAGCAGGCTTTAAAGAAGTAAACCATGTGCTACTCACTGACTAG
NGNAGAAAAGAAGNGAGGGAAGGGGGGAGGCGCGCGCGGACAGACGGGGA
GGAGAGGGAATAAAGAGGGGGGGGNGAGCATGGGGGGNGAGCGGGCGGCC
GCGGNGGGGGGGGGGGGGCGGCCGCAAGGAGGCGGCATGGTGGGCCTCTG
TGGGGAGCAAAGGGCTTGAGTGTGTGGCGGAGA
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