EY729979

Overview
NameEY729979
Unique NameEY729979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11890 contig Csv1_Contig11890:1..791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY729979 vs. ExPASy Swiss-Prot
Match: SARZ_STAA3 (HTH-type transcriptional regulator sarZ OS=Staphylococcus aureus (strain USA300) GN=sarZ PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.852e-14
Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = -1
Query:    2 LDDQLCFKLYAASRAVTRAYKPMLDQLGLTYPQYLVMLVLWEWQAAAVSQPTVKALGERLMLDSGTLTPLLKRLEQLALVRRQRSAQDEREVHLSLTDE 298
            L  QLCF  Y +S+ + + Y   L +  LTY  Y+V++ +   +        +K LGER+ LDSGTLTPLLK+LE+   V R R  +DER + +SLT++
Sbjct:    8 LSKQLCFLFYVSSKEIIKKYTNYLKEYDLTYTGYIVLMAIENDEKL-----NIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQ 101          
BLAST of EY729979 vs. ExPASy Swiss-Prot
Match: SARZ_STAAR (HTH-type transcriptional regulator sarZ OS=Staphylococcus aureus (strain MRSA252) GN=sarZ PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = -1
Query:    2 LDDQLCFKLYAASRAVTRAYKPMLDQLGLTYPQYLVMLVLWEWQAAAVSQPTVKALGERLMLDSGTLTPLLKRLEQLALVRRQRSAQDEREVHLSLTDE 298
            L  QLCF  Y +S+ + + Y   L    LTY  Y+V++ +   +        +K LGER+ LDSGTLTPLLK+LE+   V R R  +DER + +SLT++
Sbjct:    8 LSKQLCFLFYVSSKEIIKKYTNYLKDYDLTYTGYIVLMAIENDEKL-----NIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQ 101          
BLAST of EY729979 vs. ExPASy Swiss-Prot
Match: GPX4_SPIOL (Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13
Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = -2
Query:  322 TNLGVSFPLFKKIDVNGSDAHPLFVQLKKQAPVXLVPRGIKWNFTKFLIGRDGQVVKRFAPTTKPQDLTQEIEALL 549
            T     +P+F K+DVNGS+A P++  LK      L   G+KWNFTKFL+ +DG VV R+APTT P+ + ++++ LL
Sbjct:   93 TRFKAEYPIFDKVDVNGSNAAPIYKFLKSSKG-GLFGDGLKWNFTKFLVDKDGNVVDRYAPTTSPKSIEKDVKKLL 167          
BLAST of EY729979 vs. ExPASy Swiss-Prot
Match: GPX1_CAEEL (Probable glutathione peroxidase F26E4.12 OS=Caenorhabditis elegans GN=F26E4.12 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.904e-13
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = -2
Query:  322 LFKKIDVNGSDAHPLFVQLKKQAPVXLVPRGIKWNFTKFLIGRDGQVVKRFAPTTKPQDLTQEIEALL 525
            LF+KIDVNG    PLF  LK +    +    IKWNFTKFL+GRDG+++KRF PTT P+D+ ++I+  L
Sbjct:   93 LFQKIDVNGDKQSPLFKFLKNEKGGFMFD-AIKWNFTKFLVGRDGKIIKRFGPTTDPKDMEKDIKEAL 159          
BLAST of EY729979 vs. ExPASy Swiss-Prot
Match: BSAA_STAAW (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MW2) GN=bsaA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.470e-13
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = -2
Query:  322 RTNLGVSFPLFKKIDVNGSDAHPLFVQLKKQAPVXLVPRGIKWNFTKFLIGRDGQVVKRFAPTTKPQDLTQEIEALL 552
            + N GV+FP+ +KIDV G    PLF  L   A        IKWNFTKFL+ R+G VVKRFAP  KP  + +EIE LL
Sbjct:   83 KLNYGVTFPMHQKIDVKGEHQLPLFRYLTA-AQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158          
BLAST of EY729979 vs. ExPASy Swiss-Prot
Match: BSAA_STAAS (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MSSA476) GN=bsaA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.470e-13
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = -2
Query:  322 RTNLGVSFPLFKKIDVNGSDAHPLFVQLKKQAPVXLVPRGIKWNFTKFLIGRDGQVVKRFAPTTKPQDLTQEIEALL 552
            + N GV+FP+ +KIDV G    PLF  L   A        IKWNFTKFL+ R+G VVKRFAP  KP  + +EIE LL
Sbjct:   83 KLNYGVTFPMHQKIDVKGEHQLPLFRYLTA-AQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158          
BLAST of EY729979 vs. ExPASy Swiss-Prot
Match: BSAA_STAAR (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MRSA252) GN=bsaA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.470e-13
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = -2
Query:  322 RTNLGVSFPLFKKIDVNGSDAHPLFVQLKKQAPVXLVPRGIKWNFTKFLIGRDGQVVKRFAPTTKPQDLTQEIEALL 552
            + N GV+FP+ +KIDV G    PLF  L   A        IKWNFTKFL+ R+G VVKRFAP  KP  + +EIE LL
Sbjct:   83 KLNYGVTFPMHQKIDVKGEHQLPLFRYLTA-AQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158          
BLAST of EY729979 vs. ExPASy Swiss-Prot
Match: BSAA_STAAN (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain N315) GN=bsaA PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.470e-13
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = -2
Query:  322 RTNLGVSFPLFKKIDVNGSDAHPLFVQLKKQAPVXLVPRGIKWNFTKFLIGRDGQVVKRFAPTTKPQDLTQEIEALL 552
            + N GV+FP+ +KIDV G    PLF  L   A        IKWNFTKFL+ R+G VVKRFAP  KP  + +EIE LL
Sbjct:   83 KLNYGVTFPMHQKIDVKGEHQLPLFRYLTA-AQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158          
BLAST of EY729979 vs. ExPASy Swiss-Prot
Match: BSAA_STAAM (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=bsaA PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.470e-13
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = -2
Query:  322 RTNLGVSFPLFKKIDVNGSDAHPLFVQLKKQAPVXLVPRGIKWNFTKFLIGRDGQVVKRFAPTTKPQDLTQEIEALL 552
            + N GV+FP+ +KIDV G    PLF  L   A        IKWNFTKFL+ R+G VVKRFAP  KP  + +EIE LL
Sbjct:   83 KLNYGVTFPMHQKIDVKGEHQLPLFRYLTA-AQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158          
BLAST of EY729979 vs. ExPASy Swiss-Prot
Match: BSAA_STAAC (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain COL) GN=bsaA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.470e-13
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = -2
Query:  322 RTNLGVSFPLFKKIDVNGSDAHPLFVQLKKQAPVXLVPRGIKWNFTKFLIGRDGQVVKRFAPTTKPQDLTQEIEALL 552
            + N GV+FP+ +KIDV G    PLF  L   A        IKWNFTKFL+ R+G VVKRFAP  KP  + +EIE LL
Sbjct:   83 KLNYGVTFPMHQKIDVKGEHQLPLFRYLTA-AQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158          
The following BLAST results are available for this feature:
BLAST of EY729979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
SARZ_STAA35.852e-1441.41HTH-type transcriptional regulator sarZ OS=Staphyl... [more]
SARZ_STAAR9.982e-1441.41HTH-type transcriptional regulator sarZ OS=Staphyl... [more]
GPX4_SPIOL1.703e-1346.05Probable phospholipid hydroperoxide glutathione pe... [more]
GPX1_CAEEL2.904e-1352.94Probable glutathione peroxidase F26E4.12 OS=Caenor... [more]
BSAA_STAAW6.470e-1351.95Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAS6.470e-1351.95Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAR6.470e-1351.95Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAN6.470e-1351.95Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAM6.470e-1351.95Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAC6.470e-1351.95Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-023-H08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729979 ID=EY729979; Name=EY729979; organism=Citrus sinensis; type=EST; length=790bp
CTTCATCGGTCAGGCTCAGGTGCACTTCACGCTCATCCTGCGCACTGCGC
TGACGCCGCACCAGAGCCAGCTGCTCCAGGCGCTTGAGCAGCGGCGTCAG
CGTGCCGGAATCCAGCATCAAGCGCTCGCCCAAGGCCTTGACCGTAGGCT
GCGATACCGCTGCAGCCTGCCATTCCCACAACACCAGCATCACCAGGTAT
TGCGGGTAGGTCAGCCCCAACTGATCGAGCATCGGCTTGTAGGCCCGGGT
AACCGCGCGGGAGGCGGCGTAGAGCTTGAAGCACAGTTGGTCGTCAAGCG
CCAAAGACAGGTCGGTCATTTGAGCAGGGCTTCAATCTCTTGGGTCAGGT
CCTGAGGCTTGGTGGTCGGGGCAAAACGCTTGACCACCTGGCCGTCGCGG
CCGATCAGGAACTTGGTGAAGTTCCACTTGATGCCCCTTGGAACCAGNNC
AACCGGGGCCTGCTTTTTAAGCTGTACGAACAATGGGTGAGCATCGCTGC
CATTGACGTCGATCTTCTTGAACAGCGGGAAACTGACACCCAAGTTAGTT
CGCAAAATCCCGAAATGGGGCCCTCTTGGCGGGGCCCTCTAAAAGATCAA
GCTTAGTTACGCTTCATTGCGAGTCTAACCCTCTAAATGGGCCCTAAATC
AATTCCTGGGCGTCTTTTTACACGTCTTGAATGGAAAAACCCGGGTTACC
AAATAATCGCCTGGAAGGAACCCCCTTTTCCAAGGGGGGTATATAAAAAG
GGCCCCCAGATCCCCCCCCCAAATGTGCCCCCCAATGGGA
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