EY729957

Overview
NameEY729957
Unique NameEY729957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729957 vs. ExPASy Swiss-Prot
Match: PT1_BACME (Phosphoenolpyruvate-protein phosphotransferase OS=Bacillus megaterium GN=ptsI PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.972e-17
Identity = 63/203 (31.03%), Postives = 101/203 (49.75%), Query Frame = -1
Query:   12 FRLNGIELPADPGNNVPDE-QLQHLDSALEQVRGEIRHTLDQARQRKDVEEEEIFSAHLALLEDPTLLEAATTAIEHGSA-ATHAWRDAIQAQCAVLLALGKPLFAERANDLRDLQQRVLRALLGEAWHFE--LPPGAIVSAHELTPSDLLQLSKQNAAGICMAEGGATSHVAILARGKGLPCVVALGEQVLEVPQGQRVVLD 608
            FRL   EL  +  +    E ++  L++ALE+ + E+    + AR+    ++ EIF AHL +L DP L+      I + +  A HA  +       +  ++      ERA D+RD+ +RVL  LLG        +    ++ A +LTPSD  QL+++   G     GG TSH AI+AR   +P VV     + ++  G  V++D
Sbjct:   20 FRLENPELTVEKKSVTEVEAEVARLEAALEKSKSELEIIREHARKELGDDKAEIFEAHLLVLSDPELINPIKDKITNENVNAEHALDEVAAMFINMFESMDNEYMKERAADIRDVTKRVLAHLLGVNVSNPSLISEEVVIIAEDLTPSDTAQLNRKFVKGFTTDIGGRTSHSAIMARSMEIPAVVGTKTVMEDIQNGVLVIVD 222          
BLAST of EY729957 vs. ExPASy Swiss-Prot
Match: PT1_STAAR (Phosphoenolpyruvate-protein phosphotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ptsI PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.647e-17
Identity = 59/202 (29.21%), Postives = 98/202 (48.51%), Query Frame = -1
Query:   12 ELPADPGNNVPDEQ--LQHLDSALEQVRGEIRHTLDQARQRKDVEEEEIFSAHLALLEDPTLLEAATTAIEHGSA-ATHAWRDAIQAQCAVLLALGKPLFAERANDLRDLQQRVLRALLGEAWHFELP------PGAIVSAHELTPSDLLQLSKQNAAGICMAEGGATSHVAILARGKGLPCVVALGEQVLEVPQGQRVVLD 590
            +L  D    V D +  +   ++A+E  + E+    + A  +   ++  IF AHL +L+DP L++     I++ +A A  A  D       +  ++      ERA D+RD+ +RVL  +LG     ELP         ++  ++LTPSD  QL+K+   G     GG TSH AI++R   +P +V       E  QG  +++D
Sbjct:   26 DLTFDKNEKVTDVEGEVAKFNNAIEASKVELTKIRNNAEVQLGADKAAIFDAHLLVLDDPELIQPIQDKIKNENANAASALTDVTTQFVTIFESMDNEYMKERAADIRDVSKRVLSHILG----VELPNPSMIDESVVIVGNDLTPSDTAQLNKEFVQGFATNIGGRTSHSAIMSRSLEIPAIVGTKSITQEAKQGDMIIVD 223          
BLAST of EY729957 vs. ExPASy Swiss-Prot
Match: PT1_SALTY (Phosphoenolpyruvate-protein phosphotransferase OS=Salmonella typhimurium GN=ptsI PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.129e-16
Identity = 59/186 (31.72%), Postives = 90/186 (48.39%), Query Frame = -1
Query:    9 DEQLQHLDSALEQVRGEIRHTLDQARQRKDVEEEEIFSAHLALLEDPTLLEAATTAI-EHGSAATHAWRDAIQAQCAVLLALGKPLFAERANDLRDLQQRVLRALLGEAWH--FELPPGAIVSAHELTPSDLLQLSKQNAAGICMAEGGATSHVAILARGKGLPCVVALGEQVLEVPQGQRVVLDA 557
            D++++   S   +   ++     +A +    E+E IF  H+ LLED  L +     I +    A  A  + I+ Q   L  L      ERA D+RD+ +R+LR +LG A      +    I+ A +LTPS+  QL+ Q   G     GG TSH +I+AR   LP +V  G    +V  G  ++LDA
Sbjct:   37 DQEVERFLSGRAKASAQLEAIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAAHEVIEGQATALEELDDEYLKERAADVRDIGKRLLRNILGLAIIDLSAIQEEVILVAADLTPSETAQLNLQKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTAQVKNGDYLILDA 222          
BLAST of EY729957 vs. ExPASy Swiss-Prot
Match: PT1_SALTI (Phosphoenolpyruvate-protein phosphotransferase OS=Salmonella typhi GN=ptsI PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.129e-16
Identity = 59/186 (31.72%), Postives = 90/186 (48.39%), Query Frame = -1
Query:    9 DEQLQHLDSALEQVRGEIRHTLDQARQRKDVEEEEIFSAHLALLEDPTLLEAATTAI-EHGSAATHAWRDAIQAQCAVLLALGKPLFAERANDLRDLQQRVLRALLGEAWH--FELPPGAIVSAHELTPSDLLQLSKQNAAGICMAEGGATSHVAILARGKGLPCVVALGEQVLEVPQGQRVVLDA 557
            D++++   S   +   ++     +A +    E+E IF  H+ LLED  L +     I +    A  A  + I+ Q   L  L      ERA D+RD+ +R+LR +LG A      +    I+ A +LTPS+  QL+ Q   G     GG TSH +I+AR   LP +V  G    +V  G  ++LDA
Sbjct:   37 DQEVERFLSGRAKASAQLEAIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAAHEVIEGQATALEELDDEYLKERAADVRDIGKRLLRNILGLAIIDLSAIQEEVILVAADLTPSETAQLNLQKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTAQVKNGDYLILDA 222          
BLAST of EY729957 vs. ExPASy Swiss-Prot
Match: PT1_STAES (Phosphoenolpyruvate-protein phosphotransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ptsI PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.516e-16
Identity = 58/202 (28.71%), Postives = 97/202 (48.02%), Query Frame = -1
Query:   12 ELPADPGNNVPD--EQLQHLDSALEQVRGEIRHTLDQARQRKDVEEEEIFSAHLALLEDPTLLEAATTAIEHGSAATHAWRDAIQAQ-CAVLLALGKPLFAERANDLRDLQQRVLRALLGEAWHFELP------PGAIVSAHELTPSDLLQLSKQNAAGICMAEGGATSHVAILARGKGLPCVVALGEQVLEVPQGQRVVLD 590
            +L  D    V D   +++  + A+E  + E+    + A  +   ++  IF AHL +L+DP L++     I +         D +  Q  ++  ++      ERA D+RD+ +RVL  +LG     +LP        A++  ++LTPSD  QL+K+   G     GG TSH AI++R   +  VV       EV QG  +++D
Sbjct:   26 DLSYDSNEKVTDIESEVEKFNDAIEASKIELTKIRNNAEAQLGADKAAIFDAHLLVLDDPELIQPIQDKIRNDKVNAATGLDEVTTQFISIFESMDNEYMKERAADIRDVSKRVLAHILG----VDLPNPSLINESAVIVGNDLTPSDTAQLNKEFVQGFVTNIGGRTSHSAIMSRSLEIAAVVGTKSITEEVKQGDMIIVD 223          
BLAST of EY729957 vs. ExPASy Swiss-Prot
Match: PT1_STAEQ (Phosphoenolpyruvate-protein phosphotransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ptsI PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.516e-16
Identity = 58/202 (28.71%), Postives = 97/202 (48.02%), Query Frame = -1
Query:   12 ELPADPGNNVPD--EQLQHLDSALEQVRGEIRHTLDQARQRKDVEEEEIFSAHLALLEDPTLLEAATTAIEHGSAATHAWRDAIQAQ-CAVLLALGKPLFAERANDLRDLQQRVLRALLGEAWHFELP------PGAIVSAHELTPSDLLQLSKQNAAGICMAEGGATSHVAILARGKGLPCVVALGEQVLEVPQGQRVVLD 590
            +L  D    V D   +++  + A+E  + E+    + A  +   ++  IF AHL +L+DP L++     I +         D +  Q  ++  ++      ERA D+RD+ +RVL  +LG     +LP        A++  ++LTPSD  QL+K+   G     GG TSH AI++R   +  VV       EV QG  +++D
Sbjct:   26 DLSYDSNEKVTDIESEVEKFNDAIEASKIELTKIRNNAEAQLGADKAAIFDAHLLVLDDPELIQPIQDKIRNDKVNAATGLDEVTTQFISIFESMDNEYMKERAADIRDVSKRVLAHILG----VDLPNPSLINESAVIVGNDLTPSDTAQLNKEFVQGFVTNIGGRTSHSAIMSRSLEIAAVVGTKSITEEVKQGDMIIVD 223          
BLAST of EY729957 vs. ExPASy Swiss-Prot
Match: PT1_BACST (Phosphoenolpyruvate-protein phosphotransferase OS=Bacillus stearothermophilus GN=ptsI PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.286e-16
Identity = 57/185 (30.81%), Postives = 92/185 (49.73%), Query Frame = -1
Query:   12 DEQLQHLDSALEQVRGEIRHTLDQARQRKDVEEEEIFSAHLALLEDPTLLEAATTAIEHGSA-ATHAWRDAIQAQCAVLLALGKPLFAERANDLRDLQQRVLRALLGEAWHFE--LPPGAIVSAHELTPSDLLQLSKQNAAGICMAEGGATSHVAILARGKGLPCVVALGEQVLEVPQGQRVVLD 557
            + ++  L++A+ + + E+      A ++   ++  IF+AHL +L+DP LL      I+     A +A  +      ++  A+      ERA D+RD+ +RVL  LLG        +    ++ A +LTPSD  QL++Q   G     GG TSH AI+AR   +P VV       EV  G  V++D
Sbjct:   43 EAEIARLEAAVAKAKEELEAIKQHALEKLGEDKAAIFAAHLLVLDDPELLNPIKEKIQTERVNAEYALDETALFFISMFEAMDNEYMKERAADIRDVTKRVLAHLLGVTISNPSLISEEVVIIAEDLTPSDTAQLNRQYVKGFATDIGGRTSHSAIMARSLEIPAVVGTKTVTAEVKNGDIVIVD 227          
BLAST of EY729957 vs. ExPASy Swiss-Prot
Match: PT1_MYCPN (Phosphoenolpyruvate-protein phosphotransferase OS=Mycoplasma pneumoniae GN=ptsI PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.560e-16
Identity = 58/179 (32.40%), Postives = 88/179 (49.16%), Query Frame = -1
Query:   12 LDSALEQVRGEIRHTLDQARQRKDVEEEEIFSAHLALLEDPTLLEAATTAIEHGSAATHAWRDAIQAQCAVLLA-LGKPLFAERANDLRDLQQRVLRALLGEAWH--FELPPGAIVSAHELTPSDLLQLSKQNAAGICMAEGGATSHVAILARGKGLPCVVALGEQVLEVPQGQRVVLD 539
            LDSA ++   ++    +      + E   IF AH+ +L DPT+ E     +        A  D + +Q A + + +    F ERA D+ DL+QR+L  L G+  H   ++    I+ AH+LTPS    L+K+   G     GG TSH AI+AR   +P VV +     +V  GQ V +D
Sbjct:   45 LDSAFKKAVKDLEEIKEITVNNINTEAGMIFDAHIQMLNDPTITEQLEQQLAQNVHPVIAV-DTVFSQTATMFSQMQDKYFQERAADILDLRQRLLAYLTGQKPHDLVKIKSDVIIVAHDLTPSQTATLNKKYVKGFLTEIGGRTSHAAIMARSLEIPAVVGIKGITTKVKDGQIVGVD 222          
BLAST of EY729957 vs. ExPASy Swiss-Prot
Match: PT1_BACSU (Phosphoenolpyruvate-protein phosphotransferase OS=Bacillus subtilis GN=ptsI PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 9.560e-16
Identity = 62/207 (29.95%), Postives = 98/207 (47.34%), Query Frame = -1
Query:   12 FRLNGIELPADPGNNVPDE-QLQHLDSALEQVRGEIRHTLDQARQRKDVEEEEIFSAHLALLEDPTLLEAATTAIEHGSA-ATHAWRDAIQAQCAVLLALGKPLFAERANDLRDLQQRVLRALLGEAWHFELPPGAIVS------AHELTPSDLLQLSKQNAAGICMAEGGATSHVAILARGKGLPCVVALGEQVLEVPQGQRVVLD 608
            +RL   +L  +  N    E ++   D A+ + + E+    + A +    ++ +IFSAHL +L DP LL      I   S  A  A ++       +  ++      ERA D+RD+ +RV   LLG     E+P  +++S      A +LTPSD  QL+++   G     GG TSH AI+AR   +P VV        +  G  V++D
Sbjct:   19 YRLEEPDLTVEKKNISDSEAEVSRFDEAIARSKEELEKIKEHALKELGQDKADIFSAHLLVLSDPELLNPVKEKISTDSVNAEFALKETSSMFVTMFESMDNEYMKERAADIRDVTKRVTGHLLG----VEIPNPSMISEEVIIVAEDLTPSDTAQLNREFVKGFTTDIGGRTSHSAIMARSLEIPAVVGTKAATGTIQNGVTVIVD 221          
BLAST of EY729957 vs. ExPASy Swiss-Prot
Match: PT1_LISIN (Phosphoenolpyruvate-protein phosphotransferase OS=Listeria innocua GN=ptsI PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.631e-15
Identity = 57/192 (29.69%), Postives = 96/192 (50.00%), Query Frame = -1
Query:    3 DEQLQHLDSALEQVRGEIRHTLDQARQRKDVEEEEIFSAHLALLEDPTLLEAATTAIEHGSA-ATHAWRDAIQAQCAVLLALGKPLFAERANDLRDLQQRVLRALLGEAWHFELPPGAIVS------AHELTPSDLLQLSKQNAAGICMAEGGATSHVAILARGKGLPCVVALGEQVLEVPQGQRVVLDAAQ 557
            + +++  +SALE  R E+    ++A +    ++ +IF AHL +L DP L      +I++    A  A ++       +  ++      ERA D++D+++RVL  LLG      +P  A++       A +LTPSD  QL+++   G     GG TSH AI+AR   +P VV   E    V +   V++D  +
Sbjct:   38 ESEVKRFESALEVSRTELSTIREKAAKDLGEDKAQIFDAHLLVLNDPELTGPIEESIKNAKTNAETALQETTDMFIGMFESMDNEYMRERAADIKDVRKRVLSHLLGVT----IPNPALIDEEVVVVAADLTPSDTAQLNRKFVKGFVTDIGGRTSHSAIMARSLEIPAVVGTKEVTASVAKNDIVIIDGLE 225          
The following BLAST results are available for this feature:
BLAST of EY729957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PT1_BACME2.972e-1731.03Phosphoenolpyruvate-protein phosphotransferase OS=... [more]
PT1_STAAR8.647e-1729.21Phosphoenolpyruvate-protein phosphotransferase OS=... [more]
PT1_SALTY1.129e-1631.72Phosphoenolpyruvate-protein phosphotransferase OS=... [more]
PT1_SALTI1.129e-1631.72Phosphoenolpyruvate-protein phosphotransferase OS=... [more]
PT1_STAES2.516e-1628.71Phosphoenolpyruvate-protein phosphotransferase OS=... [more]
PT1_STAEQ2.516e-1628.71Phosphoenolpyruvate-protein phosphotransferase OS=... [more]
PT1_BACST3.286e-1630.81Phosphoenolpyruvate-protein phosphotransferase OS=... [more]
PT1_MYCPN9.560e-1632.40Phosphoenolpyruvate-protein phosphotransferase OS=... [more]
PT1_BACSU9.560e-1629.95Phosphoenolpyruvate-protein phosphotransferase OS=... [more]
PT1_LISIN1.631e-1529.69Phosphoenolpyruvate-protein phosphotransferase OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-023-F01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729957 ID=EY729957; Name=EY729957; organism=Citrus sinensis; type=EST; length=872bp
CGTTGCGCGGCGTCCAGCACCACCCGTTGACCCTGTGGCACCTCCAGCAC
TTGCTCGCCCAACGCGACCACACACGGCAGGCCTTTGCCCCGTGCCAGAA
TCGCCACATGAGAAGTCGCGCCGCCTTCGGCCATGCAGATGCCGGCGGCG
TTTTGCTTGCTCAGTTGCAGCAGGTCCGACGGGGTCAATTCATGGGCCGA
GACGATCGCGCCGGGCGGCAACTCGAAGTGCCAGGCCTCGCCCAGCAGCG
CCCGCAGCACGCGTTGTTGCAAGTCCCGCAGGTCGTTGGCGCGTTCGGCG
AACAGTGGTTTGCCAAGGGCGAGCAGCACTGCGCATTGGGCCTGGATCGC
ATCGCGCCAGGCGTGAGTGGCGGCGCTGCCATGTTCGATGGCGGTGGTGG
CGGCTTCCAGCAGGGTCGGGTCTTCCAGCAATGCCAGGTGGGCGGAGAAG
ATCTCTTCTTCTTCGACATCCTTGCGCTGACGGGCCTGGTCCAGGGTGTG
GCGGATTTCGCCGCGCACCTGTTCCAGGGCGCTGTCCAGGTGCTGCAATT
GTTCATCCGGCACGTTGTTGCCCGGGTCCGCAGGCAGCTCGATTCCGTTC
AGGCGGAACAGCGGGCCGCAGACCAAACCGGCGCGGCGCAGACGCCTTGC
AGCACACCGGCCTCGGTAATCGCGCGTCGCGGGGCGGGGGCCCTGNGGGC
GTTAAGTTCTTTGGGGAAGGGACCGGACAAGGGGGGAGAAGTGGGTTGGG
GGGCGGTGTGAAAACCTGTGCGAGGAGAGGGAGCTGGACCTGTGCGGGGC
GGCGTGCGCGGGTGCGAGAGAGCAGTAAGCTGGNCAGGGGGCAGATGGGC
GGGGAGTGCCTGTGCACTGGGG
back to top