EY755074

Overview
NameEY755074
Unique NameEY755074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755074 vs. ExPASy Swiss-Prot
Match: UBIB_BURM9 (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia mallei (strain NCTC 10229) GN=ubiB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.477e-12
Identity = 47/188 (25.00%), Postives = 80/188 (42.55%), Query Frame = 3
Query:   18 GIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRD----GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAXSYVAK 569
            G+  +    ++ AG+D+      GV     Q+   G FH D HPGNI    D    GR   +DFG V  LS  +K  L    +     DY  +A      G++   T V  +  A+ A+ +    + L D +   V  +       + + I  +  L+ +++L  EG+  +L P+    + A  Y+ +
Sbjct:  245 GVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPPDTRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYLER 432          
BLAST of EY755074 vs. ExPASy Swiss-Prot
Match: UBIB_BURM7 (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia mallei (strain NCTC 10247) GN=ubiB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.477e-12
Identity = 47/188 (25.00%), Postives = 80/188 (42.55%), Query Frame = 3
Query:   18 GIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRD----GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAXSYVAK 569
            G+  +    ++ AG+D+      GV     Q+   G FH D HPGNI    D    GR   +DFG V  LS  +K  L    +     DY  +A      G++   T V  +  A+ A+ +    + L D +   V  +       + + I  +  L+ +++L  EG+  +L P+    + A  Y+ +
Sbjct:  245 GVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPPDTRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYLER 432          
BLAST of EY755074 vs. ExPASy Swiss-Prot
Match: UBIB_SHEWM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=ubiB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.637e-12
Identity = 47/198 (23.74%), Postives = 90/198 (45.45%), Query Frame = 3
Query:   12 VDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMR----DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAXSYVAKRLLTDPNP 593
            ++GI  +D  A+K  G ++      GV     Q+     FH D HPGNIF  R    D     +D G +  L++++K+ L +  +   N DY  +A  +   G+++  TD++    A++ + +    K L + +F  V  +  +    + + +  +  L+ ++LL  EG+   L P     + A  ++ K +     P
Sbjct:  245 IEGIPVSDMAALKAQGTNLKVLAERGVELFFTQVFRDNFFHADMHPGNIFVSREHPEDPYYIGLDCGIMGTLTEEDKRYLAENFLAFFNRDYHRIAQLYIESGWVSPDTDIAAFEQAVKVVCEPMFNKPLDEISFGHVLLELFRTARRFDMVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLEKWMSEQVGP 442          
BLAST of EY755074 vs. ExPASy Swiss-Prot
Match: UBIB_PECCP (Probable ubiquinone biosynthesis protein ubiB OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=ubiB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.974e-12
Identity = 59/232 (25.43%), Postives = 99/232 (42.67%), Query Frame = 3
Query:   18 GIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAM----RDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAXSYVAK------------RLLTDPNPALRERLIQV--LFKDNVFQWKRLE 659
            GI  +D  A+K  G D+      GV     Q+     FH D HPGNIF       D +   +D G V  L++++K+ L +  +   N DY ++A      G++   T+V+    A+  + +    K LA+ +F  V          + + +  +  L+ ++LL  EG+   L P     + A  ++              R L +  P   E+L +V  LF D + Q K L+
Sbjct:  248 GIPVSDVDALKANGTDMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFISYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPADTNVADFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYIEGVGRQLYPQLDLWKTAKPFLETWMKRQVGLPAVFRALKEKAPFWAEKLPEVPELFYDGLRQHKMLK 479          
BLAST of EY755074 vs. ExPASy Swiss-Prot
Match: UBIB_ERWCT (Probable ubiquinone biosynthesis protein ubiB OS=Erwinia carotovora subsp. atroseptica GN=ubiB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.974e-12
Identity = 58/232 (25.00%), Postives = 99/232 (42.67%), Query Frame = 3
Query:   18 GIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAM----RDGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAXSYVAK------------RLLTDPNPALRERLIQV--LFKDNVFQWKRLE 659
            GI  +D  A+K  G D+      GV     Q+     FH D HPGNIF       D +   +D G V  L++++K+ L +  +   N DY ++A      G++   T+V+    A+  + +    K LA+ +F  V          + + +  +  L+ ++LL  EG+   L P     + A  ++              R L +  P   E+L ++  LF D + Q K L+
Sbjct:  248 GIPVSDVDALKANGTDMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFISYDHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVADFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYIEGVGRQLYPQLDLWKTAKPFLESWLKQQVGLPAVFRALKEKAPFWAEKLPEIPELFYDGLRQHKMLK 479          
BLAST of EY755074 vs. ExPASy Swiss-Prot
Match: UBIB_ACIAC (Probable ubiquinone biosynthesis protein ubiB OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ubiB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.974e-12
Identity = 46/196 (23.47%), Postives = 86/196 (43.88%), Query Frame = 3
Query:   18 GIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRD----GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAXSYVAKRLLTDPNP 593
            G+  +  + ++ AG+D+      GV+    Q+   G FH D HPGNI    +    GR   +DFG V  L++ +K+ L          DY  +A      G++   T ++ +  A+ A+ +    + L + +   V  +  +    + + I  +  L+ ++LL  EG+   L P+      A  ++ K +L    P
Sbjct:  246 GVPISQIERLRAAGVDIRQLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLEPGSFGRYISLDFGIVGSLTEFDKEYLAQNFTAFFRRDYKRVAELHVESGWVPADTRINELESAIRAVCEPYFDRPLKEISLGMVLMRLFQTSRRFHVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWSTAKPFLEKWMLDQMGP 441          
BLAST of EY755074 vs. ExPASy Swiss-Prot
Match: UBIB_SHEHH (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella halifaxensis (strain HAW-EB4) GN=ubiB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.303e-11
Identity = 47/198 (23.74%), Postives = 90/198 (45.45%), Query Frame = 3
Query:   12 VDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMR----DGRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAXSYVAKRLLTDPNP 593
            +DGI  +D  A++  G ++      GV     Q+     FH D HPGNIF  R    D     +D G +  L++++K+ L +  +   N DY  +A  +   G+++  TDV+    A++ + +    K L + +F  V  +  +    + + +  +  L+ ++LL  EG+   L P     + A  ++ + +     P
Sbjct:  245 IDGIPVSDKVALEAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFVSREHPNDPLYIGLDCGIMGTLTEEDKRYLAENFLAFFNRDYRRIAQLYIESGWVSPDTDVAAFEQAVKVVCEPMFNKPLDEISFGHVLLELFRTARRFDMVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLEQWMAEQVGP 442          
BLAST of EY755074 vs. ExPASy Swiss-Prot
Match: UBIB_LEPCP (Probable ubiquinone biosynthesis protein ubiB OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.303e-11
Identity = 46/188 (24.47%), Postives = 82/188 (43.62%), Query Frame = 3
Query:   18 GIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRD----GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAXSYVAK 569
            G+  +  + ++ AGID+      GV+    Q+   G FH D HPGNI         GR   +DFG V  L  ++K+ L    +     DY  +A      G++   T V  +  A+ A+ +    + L D +   V  +  +    + + I  +  L+ ++LL  EG+   L P+    + A  ++ +
Sbjct:  242 GVPISQIETLRAAGIDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIMVSTAPATFGRYIALDFGIVGTLDSRDKEYLAQNFLAFFRRDYRRVAELHIESGWVPASTRVDELEGAVRAVCEPHFDRPLKDISLGQVLLRLFQTSRRFNVEIQPQLVLLQKTLLNVEGLGRQLDPELDLWQTAKPFLER 429          
BLAST of EY755074 vs. ExPASy Swiss-Prot
Match: UBIB_VARPS (Probable ubiquinone biosynthesis protein ubiB OS=Variovorax paradoxus (strain S110) GN=ubiB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.701e-11
Identity = 45/198 (22.73%), Postives = 86/198 (43.43%), Query Frame = 3
Query:   12 VDGIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRD----GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAXSYVAKRLLTDPNP 593
            ++G+       ++ AG+D+      GV+    Q+   G FH D HPGNI         GR   +DFG +  L++ +K+ L    V     DY  +A      G++ +GT +  +  A+  + +    + L + +   V  +  +    + + I  +  L+ ++LL  EG+   L P+      A  ++ K ++    P
Sbjct:  244 MNGVPIAQLDRLRAAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGRYISLDFGIIGTLTESDKEYLAQNFVAFFRRDYKRVAELHLESGWVPEGTRIDELEGAIRTVCEPYFDRPLKEISLGMVLMRLFQTSRRFHVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWHTAKPFLEKWMVDQIGP 441          
BLAST of EY755074 vs. ExPASy Swiss-Prot
Match: UBIB_BURP8 (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ubiB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.701e-11
Identity = 46/188 (24.47%), Postives = 80/188 (42.55%), Query Frame = 3
Query:   18 GIRCTDPQAIKGAGIDVGGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMRD----GRIAYVDFGNVAELSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLAKGTDVSPIIPALEAIWQNSSGKGLADFNFRSVTGQFNKLVYNYRIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAXSYVAK 569
            G+  +    ++ AG+D+      GV     Q+   G FH D HPGNI    D    GR   +DFG +  LS  +K  L    +     DY  +A      G++   T V  +  A+ A+ +    + L D +   V  +       + + I  +  L+ +++L  EG+  +L P+    + A  Y+ +
Sbjct:  245 GVPISQVDTLRVAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPATTRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYLER 432          
The following BLAST results are available for this feature:
BLAST of EY755074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
UBIB_BURM94.477e-1225.00Probable ubiquinone biosynthesis protein ubiB OS=B... [more]
UBIB_BURM74.477e-1225.00Probable ubiquinone biosynthesis protein ubiB OS=B... [more]
UBIB_SHEWM7.637e-1223.74Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_PECCP9.974e-1225.43Probable ubiquinone biosynthesis protein ubiB OS=P... [more]
UBIB_ERWCT9.974e-1225.00Probable ubiquinone biosynthesis protein ubiB OS=E... [more]
UBIB_ACIAC9.974e-1223.47Probable ubiquinone biosynthesis protein ubiB OS=A... [more]
UBIB_SHEHH1.303e-1123.74Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_LEPCP1.303e-1124.47Probable ubiquinone biosynthesis protein ubiB OS=L... [more]
UBIB_VARPS1.701e-1122.73Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_BURP81.701e-1124.47Probable ubiquinone biosynthesis protein ubiB OS=B... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-023-F07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755074 ID=EY755074; Name=EY755074; organism=Citrus sinensis; type=EST; length=823bp
CCACGCGTCCGGTTGATGGTATTCGCTGCACTGACCCCCAGGCAATAAAG
GGAGCTGGAATTGATGTAGGTGGATTTCTAACAGTAGGAGTGAGTGCTGC
TTTGAGGCAACTGCTAGAATTTGGGTTATTTCATGGAGATCCGCATCCTG
GAAATATCTTTGCTATGCGTGATGGACGTATTGCTTATGTGGACTTTGGG
AATGTTGCTGAACTTAGTCAACAAAACAAACAGATTTTGATCGATGCTGT
TGTCCATGCTGTGAATGAGGACTATGCTGAGATGGCAAATGATTTTACCA
GGCTTGGCTTCTTGGCTAAGGGAACCGATGTCTCTCCTATTATTCCAGCT
TTGGAAGCAATCTGGCAAAACTCATCTGGGAAAGGACTCGCTGATTTCAA
TTTCCGAAGTGTTACGGGGCAATTTAACAAGTTAGTTTACAACTATCGTA
TCCGAATTCCAGAGAGGTTTTCTCTCGTTATTCGTTCTTTGCTGACACAA
GAGGGCATCTGCTTCACGTTGAAGCCAGATTTTAAATTTCTTGAGGTTGC
CTANTCATATGTGGCGAAGCGTCTGCTTACAGATCCTAATCCAGCTCTCC
GTGAACGCCTTATACAGGTTCTTTTCAAAGACAACGTTTTCCAATGGAAA
CGGCTNGAAACCTTATTACTCTTGCAAAGGAAATGTANCGAAGATGAACA
NCATCCTGCATTGAAAGTAAAGGCATGCCAAATTTAAGAGCTGGCAAGTT
CCAAAAATTTGGACCTACTGACCCCATTAAGATGGAGCTCGCCTTTTTNA
CTGAAGAAGGAATTCCCGACGGT
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