EY729672

Overview
NameEY729672
Unique NameEY729672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729672 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 8.305e-14
Identity = 27/39 (69.23%), Postives = 35/39 (89.74%), Query Frame = 1
Query:   61 EGSPSMIEVIKMDYVNQAFEKIEKNDVRYRFVVDVAGSQ 177
            +G  SMIE++ MDY+N+AFE++EKNDVRYRFVVDV GS+
Sbjct:  317 KGLTSMIEIVTMDYINKAFERLEKNDVRYRFVVDVKGSK 355          

HSP 2 Score: 35.4242 bits (80), Expect = 8.305e-14
Identity = 15/23 (65.22%), Postives = 20/23 (86.96%), Query Frame = 2
Query:    2 TRPFIGSMKETKEMLEFCREKGV 70
            T  F+GS+KET+EMLEF +EKG+
Sbjct:  297 TGSFVGSVKETEEMLEFWKEKGL 319          
BLAST of EY729672 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.819e-13
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 1
Query:   61 EGSPSMIEVIKMDYVNQAFEKIEKNDVRYRFVVDVAGSQL 180
            +G  S IEV+KMDYVNQA E++E+NDVRYRFVVDVAGS +
Sbjct:  316 KGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGSNI 355          

HSP 2 Score: 32.7278 bits (73), Expect = 1.819e-13
Identity = 14/23 (60.87%), Postives = 18/23 (78.26%), Query Frame = 2
Query:    2 TRPFIGSMKETKEMLEFCREKGV 70
            T  FIGSM ET+E+L FC +KG+
Sbjct:  296 TGSFIGSMAETEEVLNFCVDKGL 318          
BLAST of EY729672 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 6.728e-13
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 1
Query:   61 EGSPSMIEVIKMDYVNQAFEKIEKNDVRYRFVVDVAGSQL 180
            +G  S IEV+KMDY+NQA E++E+NDVRYRFVVDVAGS +
Sbjct:  317 KGLTSQIEVVKMDYLNQALERLERNDVRYRFVVDVAGSNI 356          

HSP 2 Score: 31.9574 bits (71), Expect = 6.728e-13
Identity = 13/23 (56.52%), Postives = 19/23 (82.61%), Query Frame = 2
Query:    2 TRPFIGSMKETKEMLEFCREKGV 70
            T  FIGS++ET+E+L FC +KG+
Sbjct:  297 TGSFIGSIEETEEVLRFCVDKGL 319          
BLAST of EY729672 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.486e-12
Identity = 27/36 (75.00%), Postives = 33/36 (91.67%), Query Frame = 1
Query:   73 SMIEVIKMDYVNQAFEKIEKNDVRYRFVVDVAGSQL 180
            SMIEV+ +DY+N A E++EKNDVRYRFVVDVAGS+L
Sbjct:  320 SMIEVVGLDYINTAMERLEKNDVRYRFVVDVAGSKL 355          

HSP 2 Score: 32.7278 bits (73), Expect = 2.486e-12
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:   11 FIGSMKETKEMLEFCREKGV 70
            FIGSM+ET+E L+FC EK V
Sbjct:  299 FIGSMEETQETLDFCAEKKV 318          
BLAST of EY729672 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 5.443e-12
Identity = 27/36 (75.00%), Postives = 33/36 (91.67%), Query Frame = 1
Query:   73 SMIEVIKMDYVNQAFEKIEKNDVRYRFVVDVAGSQL 180
            SMIEV+ +DY+N A E++EKNDVRYRFVVDVAGS+L
Sbjct:  320 SMIEVVGLDYINTAMERLEKNDVRYRFVVDVAGSEL 355          

HSP 2 Score: 31.187 bits (69), Expect = 5.443e-12
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:   11 FIGSMKETKEMLEFCREKGV 70
            FIG M+ET+E L+FC EK V
Sbjct:  299 FIGGMEETQETLDFCAEKKV 318          
BLAST of EY729672 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 9.168e-12
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 1
Query:   61 EGSPSMIEVIKMDYVNQAFEKIEKNDVRYRFVVDVAGSQL 180
            +G  S IEV+KM YVN+A E++E+NDVRYRFVVDVAGS +
Sbjct:  316 KGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 355          

HSP 2 Score: 31.187 bits (69), Expect = 9.168e-12
Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 2
Query:    2 TRPFIGSMKETKEMLEFCREKGV 70
            T  FIGS+ ET E+L+FC +KG+
Sbjct:  296 TGSFIGSIDETAEVLQFCVDKGL 318          
BLAST of EY729672 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.190e-11
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 1
Query:   61 EGSPSMIEVIKMDYVNQAFEKIEKNDVRYRFVVDVAGSQL 180
            +G  S IE +K+D +N AFE++ KNDVRYRFVVDVAGS L
Sbjct:  317 KGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGSNL 356          

HSP 2 Score: 35.4242 bits (80), Expect = 1.190e-11
Identity = 14/20 (70.00%), Postives = 19/20 (95.00%), Query Frame = 2
Query:   11 FIGSMKETKEMLEFCREKGV 70
            FIGS+KET+E+L FC+EKG+
Sbjct:  300 FIGSIKETEEVLAFCKEKGL 319          
BLAST of EY729672 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.006e-11
Identity = 26/40 (65.00%), Postives = 34/40 (85.00%), Query Frame = 1
Query:   61 EGSPSMIEVIKMDYVNQAFEKIEKNDVRYRFVVDVAGSQL 180
            +G  S IEV+KM YVN+A +++E+NDVRYRFVVDVAGS +
Sbjct:  316 KGLTSQIEVVKMGYVNEALDRLERNDVRYRFVVDVAGSNV 355          

HSP 2 Score: 31.187 bits (69), Expect = 2.006e-11
Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 2
Query:    2 TRPFIGSMKETKEMLEFCREKGV 70
            T  FIGS+ ET E+L+FC +KG+
Sbjct:  296 TGSFIGSIDETAEVLQFCVDKGL 318          
BLAST of EY729672 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 9.605e-11
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 1
Query:   73 SMIEVIKMDYVNQAFEKIEKNDVRYRFVVDVAGSQL 180
            SMIEV+ +DY+N A E++ KNDVRYRFVVDVA S L
Sbjct:  320 SMIEVVGLDYINTAMERLVKNDVRYRFVVDVAASNL 355          

HSP 2 Score: 32.7278 bits (73), Expect = 9.605e-11
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:   11 FIGSMKETKEMLEFCREKGV 70
            FIGSM+ET+E L+FC EK V
Sbjct:  299 FIGSMEETQETLDFCAEKKV 318          
The following BLAST results are available for this feature:
BLAST of EY729672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
CADH_MEDSA8.305e-1469.23Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH2_ORYSJ1.819e-1372.50Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH_LOLPR6.728e-1370.00Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH_PINRA2.486e-1275.00Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH_PINTA5.443e-1275.00Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH_MAIZE9.168e-1267.50Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH4_ARATH1.190e-1165.00Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH_SACOF2.006e-1165.00Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH7_PICAB9.605e-1169.44Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-020-A01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729672 ID=EY729672; Name=EY729672; organism=Citrus sinensis; type=EST; length=930bp
CACGCGTCCGTTCATTGGGAGCATGAAGGAGACAAAGGAAATGCTTGAAT
TCTGCCGAGAGAAGGGAGTCCCTCCATGATTGAAGTGATCAAGATGGATT
ACGTTAACCAAGCATTCGAGAAAATCGAAAAGAACGACGTTAGGTACAGA
TTCGTCGTGGACGTTGCCGGAAGCCAACTCCATCCGTAAAAAAATTCCAT
TTTGGGATGATGCTCCTTTTGGTTTTTGAGTGGCCTGTTTGGGTTTTATG
CTTTCGTCGTTGGGCTAACCCTATGTGGGTTCCGTGTTTACAATTTCTCC
TAATAAGTTAAAAAAAAAAAACCAACTGAGGTGTTTTNNAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAAGGGGG
GGGCGCCCCAAAAGGATCCAATTTTTTTTACCCTGGGTGGGGAAGTTAAA
CCCCTCTTAAAGGGGCCCCAAAATCACATCCCCGGGCCGCCTTTTAAACC
TTCTGGATGGGGAAAACCCTGGGTTTCCCCATTATATCGCTTGGGGAAAT
CCCCCCTTTCCCCCCGTGGGTGATTAACAAAAAGGCCCCCCCCCACCGCC
CCCCCCACATTGGCGCCCCCTAATGGGGGAAGGGGAGCGCCCCTCTAGCG
GCCCTATAACGCGGGGGGTGTGGTGGGTGTCCCCCCCCGGGACCGTTAAT
TTTGGTGAGCCCCCACGCGCGGGCCCTTCGGTTTTTTCCCCTCCGTTCCT
CCCCAGTGCGGCGGGTTCCCCCGCCGACTCAAATTGGGGGGCCCCCTTAG
GGGTTGCCGTATATGTGGTTTGGGCACGCCCACCCCAAAACAATGAATAG
GGGGGGGGGTCGGTTTTGGCGCCCCCCCCC
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