EY729428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: SPAST_ANOGA (Spastin OS=Anopheles gambiae GN=spas PE=3 SV=5) HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11 Identity = 47/143 (32.87%), Postives = 81/143 (56.64%), Query Frame = 3 Query: 15 KESDGVSVSDRVMSQLLVELDGL---HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHS 431 + S+ + R+ ++ LV+ DGL + + V+AATNRP ++D A LR RF + +YV P+ RE + R L+K SD ++ LA L+EG +G+D++ + R+AA+ I E L+ + T +R ++ S+ H+ Sbjct: 611 RSSNEHEATRRLKTEFLVQFDGLPANSEADRIVVMAATNRPQELDEAALR--RFPKRVYVTLPDRDTRELLLRRLLQKQGSPLSDADLAHLAQLTEGYSGSDLTALARDAALEPIRE-LNVEEVKNMD-PTKLRSIRESDFHN 749
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: SPAST_DROPE (Spastin OS=Drosophila persimilis GN=spas PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11 Identity = 45/136 (33.09%), Postives = 80/136 (58.82%), Query Frame = 3 Query: 39 SDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRK--IPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHS 431 S R+ ++ LVE DGL + + V+AATNRP ++D A LR RF + +YV P+E RE + L+K P +D +R L+ +++G +G+D++ + ++AA+ I E L+ ++ + A+RH+ + H+ Sbjct: 629 SRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTDA-LRRLSKITDGYSGSDLTALAKDAALEPIRE-LNVEQVKCLDI-NAMRHITEKDFHN 759
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 39/105 (37.14%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 45 RVMSQLLVELDGLHQRVNVT-VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEE 353 R+ ++ LV++ G+ + T V+ ATN P +D A+ R RF++ +Y+ P E R ++FR+HL P + +D NI ELA +EG +GADIS+I R++ + + + Sbjct: 246 RIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 39/105 (37.14%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 45 RVMSQLLVELDGLHQRVNVT-VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEE 353 R+ ++ LV++ G+ + T V+ ATN P +D A+ R RF++ +Y+ P E R ++FR+HL P + +D NI ELA +EG +GADIS+I R++ + + + Sbjct: 246 RIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 39/105 (37.14%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 45 RVMSQLLVELDGLHQRVNVT-VIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCS-SDVNIRELACLSEGCTGADISLICREAAISAIEE 353 R+ ++ LV++ G+ + T V+ ATN P +D A+ R RF++ +Y+ P E R ++FR+HL P + +D NI ELA +EG +GADIS+I R++ + + + Sbjct: 246 RIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 3 Query: 42 DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLR--KIPCSSDVNIRELACLSEGCTG 302 ++ ++QLLVE+DG+ +V V+A+TNR D +D AL+RPGR DR +++ P +R EIF HL+ K+ S + LA L+ G +G Sbjct: 430 EQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: SPAST_DROAN (Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.473e-11 Identity = 47/143 (32.87%), Postives = 81/143 (56.64%), Query Frame = 3 Query: 15 KESDGVSVSDRVMSQLLVELDGLHQRVN---VTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVN-IRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHS 431 + S+ S R+ ++ LVE DGL + + V+AATNRP ++D A LR RF + +YV P+E RE + L+K D +R LA ++G +G+D++ + ++AA+ I E L+ ++ + +A+R + S+ HS Sbjct: 603 RSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLSRLLQKQGSPLDTEALRRLAKTTDGYSGSDLTALAKDAALEPIRE-LNVEQVKCLDI-SAMRAITESDFHS 741 The following BLAST results are available for this feature:
BLAST of EY729428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 317
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729428 ID=EY729428; Name=EY729428; organism=Citrus sinensis; type=EST; length=884bpback to top |