EY729428

Overview
NameEY729428
Unique NameEY729428
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.657e-21
Identity = 54/122 (44.26%), Postives = 77/122 (63.11%), Query Frame = 3
Query:   45 RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 410
            R + QLL E+DG   R +V +IAATNRPD +DPA+LRPGRFDR++ +  P+E  R EI +IH  K+     V++RE+A ++E   GAD+  +C EA + AI E  +   I M   + AI  +
Sbjct:  270 RTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLKG-VDLREVAKIAENMVGADLKAVCTEAGMFAIRE--EREFIKMDDFREAISKI 388          
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: SPA5L_HUMAN (Spermatogenesis-associated protein 5-like protein 1 OS=Homo sapiens GN=SPATA5L1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 57/132 (43.18%), Postives = 81/132 (61.36%), Query Frame = 3
Query:   45 RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI---EENLDASRITMQHLKTAIRHVQPSEIHS 431
            RV++Q+L  LDG      V V+ ATNRPD +DPAL RPGRFDR + +G P    R+EI ++   K+P SS V++  LA ++ G  GAD++ +CREAA+ A+   E+N D   I       A +++QPS   S
Sbjct:  320 RVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAAMHALLHSEKNQDNPVIDEIDFLEAFKNIQPSSFRS 451          

HSP 2 Score: 101.293 bits (251), Expect = 7.731e-21
Identity = 56/151 (37.09%), Postives = 88/151 (58.28%), Query Frame = 3
Query:   27 GVSVSDRVMSQLLVELDGLHQRV-------------------NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN-LDASRITMQHLKTAIRHVQPS 419
            G  V +RV+S LL ELDG+  +                    +V +IAATNRPD +D ALLRPGR D+++Y+ PP+   R  I ++  + +P   DV++  LA  +   +GAD+  +C EAA+ A++EN LDA+ +  +H   +++ V+PS
Sbjct:  579 GCDVQERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCFFSGADLRNLCTEAALLALQENGLDATTVKQEHFLKSLKTVKPS 729          
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 55/143 (38.46%), Postives = 88/143 (61.54%), Query Frame = 3
Query:   42 DRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLV 467
            ++ ++QLL E+DG   +   V V+AATNRP+ +DPAL+RPGRFDR + V  P+   R EI ++H++ +  ++DVN++E+A L+ G  GAD++ I  EAA+ A   N     +  QHLK A+           + +S K +++V
Sbjct:  291 EQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNN--QKEVRQQHLKEAVERGIAGLEKKSRRISPKEKKIV 431          
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 55/143 (38.46%), Postives = 88/143 (61.54%), Query Frame = 3
Query:   42 DRVMSQLLVELDGL-HQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQPSEIHSYKELSAKFQRLV 467
            ++ ++QLL E+DG   +   V V+AATNRP+ +DPAL+RPGRFDR + V  P+   R EI ++H++ +  ++DVN++E+A L+ G  GAD++ I  EAA+ A   N     +  QHLK A+           + +S K +++V
Sbjct:  291 EQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNN--QKEVKQQHLKEAVERGIAGLEKKSRRISPKEKKIV 431          
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: CD48C_ARATH (Cell division control protein 48 homolog C OS=Arabidopsis thaliana GN=CDC48C PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 71/178 (39.89%), Postives = 96/178 (53.93%), Query Frame = 3
Query:    3 TRPGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLS-EGCTGADISLICREAAISAIEENLDASR-------------ITMQHLKTAIRHVQPS----EIHSYKELSAKFQRLVHSNAE 482
            T  GKE  G  V +R+++Q LVELDG  +R NV VI ATNRPD +DPA LRPGRF  LLYV  PN  +R  I +   RK P    V++  +A  + EG +GAD++ + ++A   A+EE + +S              I  +H + A+  V PS    +   Y  LS K Q  V  N E
Sbjct:  635 TSRGKE--GAWVVERLLNQFLVELDGGERR-NVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNKQQRRHYDALSTKLQESVGRNTE 809          
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: SPA5L_BOVIN (Spermatogenesis-associated protein 5-like protein 1 OS=Bos taurus GN=SPATA5L1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 54/132 (40.91%), Postives = 80/132 (60.61%), Query Frame = 3
Query:   45 RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAI---EENLDASRITMQHLKTAIRHVQPSEIHS 431
            RV++Q+L  LDG+ +   V V+ +TNRPD +DPAL RPGRFDR + +G P    R+ I ++   K+P S  V++  LA ++ G  GAD++ +CREAA+ A+   E+N D   I       A + +QPS   S
Sbjct:  322 RVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAMQALLHSEKNQDNPTIDETDFLEAFKKIQPSSFRS 453          

HSP 2 Score: 100.138 bits (248), Expect = 1.722e-20
Identity = 60/176 (34.09%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   33 SVSDRVMSQLLVELDGLHQRV-------------------------------NVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN-LDASRITMQHLKTAIRHVQPSEIHS----YKELSAK 452
            +V DRV+S LL ELDG+  +                                NV V+AATNRPD +D ALLRPGR D+++Y+ PP+E  R  I ++  +  P   DV++ ++A  +   +GAD+  +C+EAA+ A++EN L+ + +  +H   +++ V+PS  H     YK L  K
Sbjct:  583 NVQDRVLSVLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAETCFFSGADLGNLCKEAALLALQENGLEVTTVKQEHFLESLKTVKPSLSHKDLTLYKNLFQK 758          
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 57/123 (46.34%), Postives = 76/123 (61.79%), Query Frame = 3
Query:   45 RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHVQ 413
            R + QLL E+DG     NV +IAATNR D +DPALLRPGRFDRL+ V  PN   R+EIFRI+L+K+    ++    LA ++EG +GA+I  +C EA   AI        + M  L TAI  ++
Sbjct:  256 RTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNG--RKYVNMTDLITAIEKIK 376          
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 3
Query:   45 RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEENLDASRITMQHLKTAIRHV 410
            R + QLL E+DG   R +V +IAATNRPD +DPA+LRPGRFDR++ +  P+E  R +I +IH  K+     V++RE+A ++E   GAD+  +C EA + AI E  +   I M   + AI  +
Sbjct:  270 RTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNLKG-VDLREVAKIAENMVGADLKAVCTEAGMFAIRE--EREFIKMDDFREAITKI 388          
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 47/105 (44.76%), Postives = 74/105 (70.48%), Query Frame = 3
Query:   42 DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN 356
            ++ ++Q+LVE+DG      + VIAATNRPD +DPALLRPGRFDR + VG P+   RE+I ++H+R++P ++D++   +A  + G +GAD++ +  EAA+ A   N
Sbjct:  272 EQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGN 376          
BLAST of EY729428 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 47/105 (44.76%), Postives = 74/105 (70.48%), Query Frame = 3
Query:   42 DRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREEIFRIHLRKIPCSSDVNIRELACLSEGCTGADISLICREAAISAIEEN 356
            ++ ++Q+LVE+DG      + VIAATNRPD +DPALLRPGRFDR + VG P+   RE+I ++H+R++P ++D++   +A  + G +GAD++ +  EAA+ A   N
Sbjct:  272 EQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGN 376          
The following BLAST results are available for this feature:
BLAST of EY729428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
PSMR_METMP2.657e-2144.26Proteasome-activating nucleotidase OS=Methanococcu... [more]
SPA5L_HUMAN3.470e-2143.18Spermatogenesis-associated protein 5-like protein ... [more]
FTSH_HELPY3.470e-2138.46Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_HELPJ3.470e-2138.46Cell division protease ftsH homolog OS=Helicobacte... [more]
CD48C_ARATH3.470e-2139.89Cell division control protein 48 homolog C OS=Arab... [more]
SPA5L_BOVIN4.532e-2140.91Spermatogenesis-associated protein 5-like protein ... [more]
PSMR_SULTO4.532e-2146.34Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
PSMR_METM55.919e-2143.44Proteasome-activating nucleotidase OS=Methanococcu... [more]
FTSH_SALTY5.919e-2144.76Cell division protease ftsH OS=Salmonella typhimur... [more]
FTSH_SALTI5.919e-2144.76Cell division protease ftsH OS=Salmonella typhi GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-016-H03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729428 ID=EY729428; Name=EY729428; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGGGGAAGGAAAGTGATGGGGTTTCTGTTTCTGATCGGGTT
ATGAGTCAACTTCTTGTTGAATTGGATGGCCTGCATCAAAGAGTTAATGT
TACTGTTATTGCTGCTACAAATCGACCAGACAAGATTGATCCTGCCCTGT
TGCGACCAGGACGCTTTGACAGGCTTCTGTATGTGGGACCTCCAAATGAG
ACTGACCGAGAAGAAATATTCCGAATTCATTTGCGTAAAATTCCTTGCAG
CTCTGATGTAAACATAAGAGAACTGGCTTGCCTCTCAGAAGGCTGTACTG
GGGCTGATATATCATTAATCTGCCGAGAGGCAGCCATTTCAGCCATTGAG
GAGAACCTCGATGCATCAAGAATAACAATGCAACACTTGAAGACTGCAAT
TAGACACGTACAACCATCGGAGATTCATTCTTACAAGGAGCTCTCAGCTA
AGTTCCAAAGGCTTGTACACTCTAATGCGGAGGCTGATGAATCAGGATAT
CAGCTGCGCCCGAGTAAATCAATCGGATTGAATATGTGGTCCCTAATAAA
ATCCATTGCACTGTTCCTATGTCGCTTCCCAGCAGGCCTCTCACAATCAG
AGTCTGGTTCAAGCGGGTAGCTAAAGTTGTCCTGTTAGTTTATACGGTGT
TCCTANTACATTACCAGCAGCTCCAGGGGATTAGTTTCAGAAGATATGCA
TGATTCTGCCTGATCACCANAGCTTGGGCAAGAGGCTGGAATCTTGTAAA
GATTCTTGAAAGTGGAGTTAGTTTCTCAATATACCCAGCTTTGTGCCTGG
ATGCCCATTGCCAGTGAACAGATAGACCTAAATTAGTGGGACCCTTCCTA
CATGGTGAACAAACGTCCCGATGGTTGTCGGGTC
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