EY729424

Overview
NameEY729424
Unique NameEY729424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY729424 vs. ExPASy Swiss-Prot
Match: HIS8_METAC (Histidinol-phosphate aminotransferase OS=Methanosarcina acetivorans GN=hisC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.313e-11
Identity = 44/144 (30.56%), Postives = 68/144 (47.22%), Query Frame = 1 
Query:  331 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPVEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN-DVLVFSDEVYDKLAFEMDHISIASLPXMYERTVTMNSLGKTFSLTGWKIGWAIAPRTL 759
            +I  GDEVI+  P +  YE      G K      R PDF++  E++   +S  T+ I + +P+NP+G +    +L  I    +EN   LVF DE Y + A      ++  L   Y+      +  K F L G ++G+ I P  L
Sbjct:  111 IIEKGDEVIVPTPTFAYYELPARACGGK-PVFVRRNPDFSLDPEKILGAVSPRTKIIFLCSPNNPSGNLLPEADLRKI----VENTHALVFVDEAYVEFADR----NLTGLVREYDNLAVGRTFSKVFGLAGLRLGYGILPEWL 245
The following BLAST results are available for this feature:
BLAST of EY729424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
HIS8_METAC9.313e-1130.56Histidinol-phosphate aminotransferase OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-016-G07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729424 ID=EY729424; Name=EY729424; organism=Citrus sinensis; type=EST; length=875bp
CCACGCGTCCGGCCTCAACAGGTTGCTAAGCGCTTGGAGAAGTTTAAAAC
TACAATCTTTACACAAATGAGTATGCTTGCCATCAAACATGGAGCTATAA
ATCTTGGTCAAGGCTTTCCCAACTTCGATGGCCCAGATTTTGTTAAAGAT
GCAGCGATTCAAGCCATAAGGGATGGGAAGAATCAATATGCTCGTGGACA
TGGGGTTCCAGAGTTCAACTCTGCCATTGCTTCCCGGTTTAAGAAAGATT
CTGGGCTTGAGGTTGACCCTGAAAAGGAAGTTACTGTTACCTCTGGGTGC
ACCGAAGCCATTGCTGCAACCATCTTAGGTTTGATTAATCCTGGAGATGA
GGTGATCCTTTTTGCACCTTTCTATGATTCCTATGAAGCTACTCTCTCCA
TGGCTGGTGCTAAAATTAAATGCATCACATTGCGCCCTCCAGATTTTGCC
ATCCCCGTCGAAGAGCTCAAGTCTACAATCTCAAAAAATACTCGTGCAAT
TCTTATGAACACTCCACATAACCCCACTGGAAAGATGTTCACTAGGGAGG
AACTTAATGTTATTGCATCTCTTTGCATTGAGAATGATGTGTTGGTTTTT
AGTGATGAGGTCTATGATAAGTTGGCTTTTGAAATGGATCACATTTCCAT
AGCCTCTCTTCCTGNAATGTATGAGCGTACTGTAACCATGAATTCCTTAG
GGAAGACATTCTCTTTAACAGGGTGGAAGATCGGGTGGGCAATAGCTCCA
CGCACCTTACATGGGGGGTGCGGCAGGCACACTCTTTTCTCACGTTTGGC
ACATCCACTCCAATGCAGTGGGCAGCTACAGCAGCCCTTAGAGCTCGGGA
GACGTACTATGAAGAGCTAAAGAGA
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