EY729424

Overview
NameEY729424
Unique NameEY729424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729424 vs. ExPASy Swiss-Prot
Match: 1A15_ARATH (1-aminocyclopropane-1-carboxylate synthase 5 OS=Arabidopsis thaliana GN=ACS5 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.437e-11
Identity = 54/198 (27.27%), Postives = 89/198 (44.95%), Query Frame = 1
Query:  199 HGVPEFNSAIASRFKKDSGLEV--DPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM-AGAKIKCITLRPPD-FAIPVEELKSTISK------NTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDH-ISIASL--------PXMYERTVTMNSLGKTFSLTGWKIG 735
            HG+PEF  A+A   ++  G  V  DP+K + + +G T A    +  L  PGD  +L  P+Y  ++  L    GA+I  I     + F I    L+    +        + +L+  P NP G   TR ELN++       ++ + SDE+Y    F  +  IS+  +          + +R   + SL K   L G+++G
Sbjct:   86 HGMPEFKKAMAEFMEEIRGNRVTFDPKK-IVLAAGSTSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGAEIVPIHCSSSNGFQITESALQQAYQQAQKLDLKVKGVLVTNPSNPLGTALTRRELNLLVDFITSKNIHLISDEIYSGTMFGFEQFISVMDVLKDKKLEDTEVSKRVHVVYSLSKDLGLPGFRVG 282          
BLAST of EY729424 vs. ExPASy Swiss-Prot
Match: HIS8_METMA (Histidinol-phosphate aminotransferase OS=Methanosarcina mazei GN=hisC PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.876e-11
Identity = 47/144 (32.64%), Postives = 72/144 (50.00%), Query Frame = 1
Query:  331 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPVEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEN-DVLVFSDEVYDKLAFEMDHISIASLPXMYERTVTMNSLGKTFSLTGWKIGWAIAPRTL 759
            +I  GDEVI+  P +  YE      GA+   I  R  DF++  E++   +S  T+ I + +P+NP+G +    +L  I    IEN D LVF DE Y + A      ++A+L   Y+      +  K F L G ++G+ I P  L
Sbjct:  112 IIEKGDEVIVPIPTFSYYELPARACGAEPVFIR-RNQDFSLNPEKILEAVSPRTKIIFLCSPNNPSGNLLPEADLRKI----IENTDALVFVDEAYVEFADR----NLAALVNEYDNVAVGRTFSKVFGLAGLRLGYGIMPEWL 246          
BLAST of EY729424 vs. ExPASy Swiss-Prot
Match: HIS8_METM5 (Histidinol-phosphate aminotransferase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=hisC PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.876e-11
Identity = 47/195 (24.10%), Postives = 87/195 (44.62%), Query Frame = 1
Query:  181 NQYARGHGVPE-FNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPD-FAIPVEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPXMYERTVTMNSLGKTFSLTGWKIGWAIAPRTL 759
            N+ +  H  P+  N  +     K +  ++  E  +    G  E I   +  LI+ GDEVI+  P +  Y  +  + GA IK       + F + VE + + I++ T+ I + TP+NPTG +   E++  I       D LV  D  Y  + +      + +    Y+  + + +  K F L G ++G+ +  + +
Sbjct:   59 NEVSNLHQYPQPINPELMDEISKFT--KMPTENIIVGGDGADEVIDNIMRILIDEGDEVIIPIPTFTQYAISAKIHGANIKWAKFDEENGFKLDVESVLNNITEKTKVIFLCTPNNPTGNVIPTEDIKKIVE---STDALVMIDHAY--IEYSKGEYDLTNWALKYDNVLVLRTFSKVFGLAGQRVGFGVTSKKI 246          
BLAST of EY729424 vs. ExPASy Swiss-Prot
Match: HIS8_METM6 (Histidinol-phosphate aminotransferase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=hisC PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.451e-11
Identity = 47/195 (24.10%), Postives = 88/195 (45.13%), Query Frame = 1
Query:  181 NQYARGHGVPE-FNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPD-FAIPVEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPXMYERTVTMNSLGKTFSLTGWKIGWAIAPRTL 759
            ++ ++ H  P+  N  +     K + + V  E  +    G  E I   +  LI+  DEVI+  P +  Y  +  + GA IK       + F +  E + + I++ T+AI + TP+NPTG +   E++  I       D LV  D  Y  + +  +   + +    Y+  + + +  K F L G ++G+ +  + L
Sbjct:   59 DEVSKLHQYPQPINPELMEEISKFTKMPV--ENIIVGGDGADEVIDNIMRILIDEDDEVIIPIPTFTQYAISAKIHGANIKWAKFDEENGFKLDAESVLNNITEKTKAIFLCTPNNPTGNVIPTEDIKKIVE---STDALVMIDHAY--IEYSKEEYDLTNWALKYDNVLVLRTFSKVFGLAGQRVGYGVTSKKL 246          
BLAST of EY729424 vs. ExPASy Swiss-Prot
Match: HIS8_SULTO (Histidinol-phosphate aminotransferase OS=Sulfolobus tokodaii GN=hisC PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.201e-11
Identity = 45/163 (27.61%), Postives = 80/163 (49.08%), Query Frame = 1
Query:  262 VDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPD--FAIPVEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPXMYERTVTMNSLGKTFSLTGWKIGWAI 744
            V+P K +  T G   A+ A    LI  GD+V++  P Y  Y+   S+ G K+  + L   D  + +  E+     +KN R ++++ P+NPTG    + E + + +L    +  +  DE Y    +E    ++A L   Y   + + +L K FSL  +++G+ I
Sbjct:    7 VEP-KNIYPTPGGDGALRAVFYNLIQTGDKVVINNPSYSMYKVYASVRGLKLTRVNLIENDNWWKMNFEKFLDE-AKNARLVIIDDPNNPTGSPMLKAEEDKVRALAESINGFILIDEAY----YEFSGYTVAKLINKYPNLLIVRTLSKAFSLASYRVGYLI 163          
BLAST of EY729424 vs. ExPASy Swiss-Prot
Match: HIS8_LACF3 (Histidinol-phosphate aminotransferase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=hisC PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.201e-11
Identity = 52/208 (25.00%), Postives = 90/208 (43.27%), Query Frame = 1
Query:  142 VKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTS-GCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPVEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPXMYERTVTMNSLGKTFSLTGWKIGWAIAPRTL 759
            VK+A I AI DG  N+Y  G          AS  +   G +++   +  V   G  E I       + P D+V++  P +  Y    ++ GA +K + + P           + I++ TR + +  P+NPTG + + + +       +  D LVF DE Y   A +    +   L   Y+    + +L K + L   ++G+A+ P  L
Sbjct:   45 VKEALINAINDGALNRYPDGD---------ASELRALVGQQLNVAGDQLVFGVGLDEIIELVARAFLTPDDQVVVAKPAFSEYALHATVEGAAVKEVPVNPATGHFDFAGALAVINEATRLVWICNPNNPTGVLESPQAIEDFVRQ-VPKDTLVFIDEAYLDFADDPAKATCLPLVKRYQNVAVLRTLSKAYGLANVRVGFAVMPVAL 242          
BLAST of EY729424 vs. ExPASy Swiss-Prot
Match: HIS8_STAS1 (Histidinol-phosphate aminotransferase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=hisC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 53/211 (25.12%), Postives = 92/211 (43.60%), Query Frame = 1
Query:  121 NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPVEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPXMYERTVTMNSLGKTFSLTGWKIGWAIAPR 753
            N  GP      AIQA  D + QY    G P    AI+        L +DP + +   +G  E I      ++ PGD+++     +  Y     +  A +  + L+  +F +  + + S I  +T+ + +  P+NPTG+ FT + L       + + + V  DE Y + A   D     +L   +E    + +  K + L G +IG+ IA +
Sbjct:   38 NLYGPSPKVKEAIQAHLD-ELQYYPETGSPLIKEAISKH------LNIDPAR-ILFGAGLDEVILMISRAVLTPGDKIVTSEMTFGQYYHNAIVESANVVQVPLQNGEFDL--DGILSEIDNDTKLVWLCNPNNPTGRYFTHDALRNFLER-VPSHIPVIVDEAYVEFATAKDFPDTLALQQEFENAFLLRTFSKAYGLAGMRIGYVIAAK 237          
BLAST of EY729424 vs. ExPASy Swiss-Prot
Match: HIS8_BACSK (Histidinol-phosphate aminotransferase OS=Bacillus clausii (strain KSM-K16) GN=hisC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 51/214 (23.83%), Postives = 93/214 (43.46%), Query Frame = 1
Query:  127 DGPDFVKDAAIQAIRDGKNQ---YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPVEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPXMYERTVTMNSLGKTFSLTGWKIGWAIAPRTL 759
            + P     A  +AI DG ++   Y  G+G      A+A++ K D G       ++ + +G  E I       + P    ++  P +  Y+   ++ GA IK IT++  D +  ++ + + I   TR + +  P+NP G      EL       +    LV  DE Y +     D  +  +L   Y + V + +  K + L G ++G+ I+ R +
Sbjct:   38 ENPYGASPAVAKAIADGASKTFLYPDGYGTA-LRKALAAKHKVDEG-------QLILGNGTDEVIQLLCRSFLTPETNTVMATPSFSQYKLNATIEGATIKEITVKE-DGSHDLDAMLAAIDDQTRIVWVCNPNNPNGVALGEAELKTFLD-AVPTTCLVVVDEAYYEYVELDDFPNSVALLNAYPQLVVLRTFSKAYGLAGLRVGYGISQREI 241          
BLAST of EY729424 vs. ExPASy Swiss-Prot
Match: 1A14_SOLLC (1-aminocyclopropane-1-carboxylate synthase 4 OS=Solanum lycopersicum GN=ACS4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11
Identity = 52/194 (26.80%), Postives = 93/194 (47.94%), Query Frame = 1
Query:  199 HGVPEFNSAIASRFKKDSGLEVDPE-KEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSM-AGAKIKCITLRP-PDFAIPVEELKSTISKNTRA------ILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAFEM-DHISIASL-----PXMYERTVTMNSLGKTFSLTGWKIG 735
            HG+PEF +AIA   +K  G +V  + K V +  G T A    IL L +PGD  ++  P+Y  +   L   +G ++  I+ +   +F I +E ++    K  +A      +++  P NP G +  R+ L  I++   E+++ +  DE+Y    F     +SIA +         +    ++SL K     G+++G
Sbjct:   99 HGLPEFTNAIAKFMEKTRGGKVKFDAKRVVMAGGATGANETLILCLADPGDAFLVPTPYYPGFNRDLRWRSGVQLLPISCKSCNNFKITIEAIEEAYEKGQQANVKIKGLILTNPCNPLGTILDRDTLKKISTFTNEHNIHLVCDEIYAATVFNSPKFVSIAEIINEDNCINKDLVHIVSSLSKDLGFPGFRVG 292          
BLAST of EY729424 vs. ExPASy Swiss-Prot
Match: HIS8_METBF (Histidinol-phosphate aminotransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=hisC PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11
Identity = 46/144 (31.94%), Postives = 69/144 (47.92%), Query Frame = 1
Query:  331 LINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPDFAIPVEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIEND-VLVFSDEVYDKLAFEMDHISIASLPXMYERTVTMNSLGKTFSLTGWKIGWAIAPRTL 759
            +I  GDEVI+  P +  YE      G K      R  DF+I  E+L    S  T+ I + +P+NP+G +   ++L  +    +EN   LVF DE Y + A      ++A L   Y+  V   +  K F L G ++G+ I P  L
Sbjct:  110 VIEKGDEVIVPTPTFAYYELPARACGGK-PVFVRRSQDFSIDPEKLLEATSSRTKIIFLCSPNNPSGNLLPEKDLRKV----LENTRALVFVDEAYVEFADR----NLAELVREYDNLVVGRTFSKVFGLAGLRLGYGIMPEWL 244          
The following BLAST results are available for this feature:
BLAST of EY729424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
1A15_ARATH1.437e-1127.271-aminocyclopropane-1-carboxylate synthase 5 OS=Ar... [more]
HIS8_METMA1.876e-1132.64Histidinol-phosphate aminotransferase OS=Methanosa... [more]
HIS8_METM51.876e-1124.10Histidinol-phosphate aminotransferase OS=Methanoco... [more]
HIS8_METM62.451e-1124.10Histidinol-phosphate aminotransferase OS=Methanoco... [more]
HIS8_SULTO3.201e-1127.61Histidinol-phosphate aminotransferase OS=Sulfolobu... [more]
HIS8_LACF33.201e-1125.00Histidinol-phosphate aminotransferase OS=Lactobaci... [more]
HIS8_STAS14.180e-1125.12Histidinol-phosphate aminotransferase OS=Staphyloc... [more]
HIS8_BACSK4.180e-1123.83Histidinol-phosphate aminotransferase OS=Bacillus ... [more]
1A14_SOLLC5.460e-1126.801-aminocyclopropane-1-carboxylate synthase 4 OS=So... [more]
HIS8_METBF7.131e-1131.94Histidinol-phosphate aminotransferase OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-016-G07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729424 ID=EY729424; Name=EY729424; organism=Citrus sinensis; type=EST; length=875bp
CCACGCGTCCGGCCTCAACAGGTTGCTAAGCGCTTGGAGAAGTTTAAAAC
TACAATCTTTACACAAATGAGTATGCTTGCCATCAAACATGGAGCTATAA
ATCTTGGTCAAGGCTTTCCCAACTTCGATGGCCCAGATTTTGTTAAAGAT
GCAGCGATTCAAGCCATAAGGGATGGGAAGAATCAATATGCTCGTGGACA
TGGGGTTCCAGAGTTCAACTCTGCCATTGCTTCCCGGTTTAAGAAAGATT
CTGGGCTTGAGGTTGACCCTGAAAAGGAAGTTACTGTTACCTCTGGGTGC
ACCGAAGCCATTGCTGCAACCATCTTAGGTTTGATTAATCCTGGAGATGA
GGTGATCCTTTTTGCACCTTTCTATGATTCCTATGAAGCTACTCTCTCCA
TGGCTGGTGCTAAAATTAAATGCATCACATTGCGCCCTCCAGATTTTGCC
ATCCCCGTCGAAGAGCTCAAGTCTACAATCTCAAAAAATACTCGTGCAAT
TCTTATGAACACTCCACATAACCCCACTGGAAAGATGTTCACTAGGGAGG
AACTTAATGTTATTGCATCTCTTTGCATTGAGAATGATGTGTTGGTTTTT
AGTGATGAGGTCTATGATAAGTTGGCTTTTGAAATGGATCACATTTCCAT
AGCCTCTCTTCCTGNAATGTATGAGCGTACTGTAACCATGAATTCCTTAG
GGAAGACATTCTCTTTAACAGGGTGGAAGATCGGGTGGGCAATAGCTCCA
CGCACCTTACATGGGGGGTGCGGCAGGCACACTCTTTTCTCACGTTTGGC
ACATCCACTCCAATGCAGTGGGCAGCTACAGCAGCCCTTAGAGCTCGGGA
GACGTACTATGAAGAGCTAAAGAGA
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