EY729419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: SYGB_JANMA (Glycyl-tRNA synthetase beta subunit OS=Janthinobacterium sp. (strain Marseille) GN=glyS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.444e-11 Identity = 45/106 (42.45%), Postives = 54/106 (50.94%), Query Frame = -3 Query: 248 KRIGNLLKKAEGEIGA-VNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLA 562 KR+GN+LKK EG + A V+ A+L+ LA R PVDAFF +MV AED A+R NR LL LH MNQVADIS+LA Sbjct: 594 KRVGNILKKVEGTVAAQVDTALLKEPAEIALNQTLTTVKPQAEAAFARGDYTASLQALAALRNPVDAFFDGVMVNAEDIALRNNRQGLLATLHQAMNQVADISKLA 699
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: SYGB_AZOSB (Glycyl-tRNA synthetase beta subunit OS=Azoarcus sp. (strain BH72) GN=glyS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.202e-11 Identity = 46/105 (43.81%), Postives = 51/105 (48.57%), Query Frame = -3 Query: 248 KRIGNLLKKAEGEIGAVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLA 562 KRI N+LKKAEG G + L LA R VDAFF +MVMAE+P R NRLALL QL LMNQVADISRL+ Sbjct: 590 KRIVNILKKAEGAPGEPDVALLQEDAEKALFHRVIEIAPLVKSHVANEDYTDALCVLAGLRAEVDAFFDGVMVMAEEPLTRQNRLALLAQLAGLMNQVADISRLS 694
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: SYGB_NEIMB (Glycyl-tRNA synthetase beta subunit OS=Neisseria meningitidis serogroup B GN=glyS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.167e-11 Identity = 42/106 (39.62%), Postives = 52/106 (49.06%), Query Frame = -3 Query: 245 KRIGNLLKKAEGEIGAVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLAQ 562 KR+ NLLKKA+ E+GAVN+ L LA + VDAFF +MVMAED AV+ NRL LL +L MN VADI+ L + Sbjct: 582 KRVQNLLKKADAELGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADIALLGE 687
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: SYGB_NEIG1 (Glycyl-tRNA synthetase beta subunit OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=glyS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.361e-11 Identity = 42/106 (39.62%), Postives = 52/106 (49.06%), Query Frame = -3 Query: 245 KRIGNLLKKAEGEIGAVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLAQ 562 KR+ NLLKKA+ E+GAVN+ L LA + VDAFF +MVMAED AV+ NRL LL +L MN VADI+ L + Sbjct: 582 KRVQNLLKKADAELGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADIALLGE 687
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: SYGB_CHRSD (Glycyl-tRNA synthetase beta subunit OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=glyS PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.361e-11 Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = -3 Query: 245 LRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLAQ 403 L LAQ R PVDAFF D+MVMAED AVR NRLALL L +L +VADI++L Q Sbjct: 636 LDVLAQLRGPVDAFFEDVMVMAEDEAVRRNRLALLASLQSLFLEVADIAQLQQ 688 The following BLAST results are available for this feature:
BLAST of EY729419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729419 ID=EY729419; Name=EY729419; organism=Citrus sinensis; type=EST; length=564bpback to top |