EY729382

Overview
NameEY729382
Unique NameEY729382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729382 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 5.715e-59
Identity = 111/143 (77.62%), Postives = 119/143 (83.22%), Query Frame = 3
Query:   87 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 515
            KIKIGINGFGRIGRLVARVAL+RDDVELVAVNDPFI+TDYMTYMFKYDSVHGQWK++EL VKD  TLLFG+KPV VF  RNPEEIPWA TGA+ +VESTGVFT               V+ISAPSKDAPMFVVGVNE EYKPE
Sbjct:    4 KIKIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELTVKDSNTLLFGQKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPE 146          
BLAST of EY729382 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 5.715e-59
Identity = 111/142 (78.17%), Postives = 119/142 (83.80%), Query Frame = 3
Query:   90 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 515
            IKIGINGFGRIGRLVARV LQR+D ELVAVNDPFI+T+YMTYMFKYDSVHGQWKH+++KVKDEKTLLFGEK V VFG RNPEEIPW  TGA+YVVESTGVFT               V+ISAPSKDAPMFVVGVNE EYKPE
Sbjct:    4 IKIGINGFGRIGRLVARVILQREDCELVAVNDPFITTEYMTYMFKYDSVHGQWKHHDIKVKDEKTLLFGEKAVTVFGNRNPEEIPWGGTGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPE 145          
BLAST of EY729382 vs. ExPASy Swiss-Prot
Match: G3PC_PINSY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pinus sylvestris GN=GAPC PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.836e-58
Identity = 111/148 (75.00%), Postives = 119/148 (80.41%), Query Frame = 3
Query:   72 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 515
            M    KIKIGINGFGRIGRLVARVAL RDD+ELV VNDPFISTDYM+YMFKYDSVHG+WKH+E+ VKD KTLLFGEK VAVFG RNPEEIPW + GAEYVVESTGVFT               VVISAPSKDAPMFVVGVNE +YK +
Sbjct:    1 MGSTGKIKIGINGFGRIGRLVARVALTRDDIELVGVNDPFISTDYMSYMFKYDSVHGKWKHHEVNVKDSKTLLFGEKSVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKEKASAHLKAGAKKVVISAPSKDAPMFVVGVNEHQYKSD 148          
BLAST of EY729382 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 4.838e-58
Identity = 111/134 (82.84%), Postives = 115/134 (85.82%), Query Frame = 3
Query:  114 GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 515
            GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKH+ELKVKDEKTLLFGEK V VFG RNPEEIPWA+ GA++VVESTGVFT               VVISAPSKDAPMFVVGVNEKEYKPE
Sbjct:    1 GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHHELKVKDEKTLLFGEKSVRVFGIRNPEEIPWAEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPE 134          
BLAST of EY729382 vs. ExPASy Swiss-Prot
Match: G3PD_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 OS=Zea mays GN=GAPC2 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.408e-57
Identity = 108/140 (77.14%), Postives = 117/140 (83.57%), Query Frame = 3
Query:   87 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 506
            KIKIGINGFGRIGRLVARVALQ +DVELVAVNDPFI+TDYMTYMFKYD+VHGQWKH+++ +KD KTLLFGEKPV VFG RNPEEIPW + GAEYVVESTGVFT               VVISAPSKDAPMFVVGVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIALKDSKTLLFGEKPVTVFGIRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEDKY 142          
BLAST of EY729382 vs. ExPASy Swiss-Prot
Match: G3PX_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.838e-57
Identity = 107/140 (76.43%), Postives = 118/140 (84.29%), Query Frame = 3
Query:   87 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 506
            KIKIGINGFGRIGRLVARVALQ DDVELVAVNDPFI+T+YMTYMFKYD+VHG WKH+++K+KD+KTLLFGEKPV VFG RNPEEIPW + GA+YVVESTGVFT               VVISAPSKDAPMFVVGVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTEYMTYMFKYDTVHGHWKHSDIKLKDDKTLLFGEKPVTVFGVRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEDKY 142          
BLAST of EY729382 vs. ExPASy Swiss-Prot
Match: G3PC_TAXBA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Taxus baccata PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.838e-57
Identity = 112/148 (75.68%), Postives = 120/148 (81.08%), Query Frame = 3
Query:   72 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 515
            M    KIKIGINGFGRIGRLVARVALQRDD+ELVAVNDPFIST+ +T +FKYDSVHGQWK +E+KVKDEKTLLFGEK VAVFG RNPEEIPW + GAEYVVESTGVFT               VVISAPSKDAPMFVVGVNE EYK +
Sbjct:    1 MGSTGKIKIGINGFGRIGRLVARVALQRDDIELVAVNDPFISTESLTSLFKYDSVHGQWKKHEVKVKDEKTLLFGEKHVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSD 148          
BLAST of EY729382 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSJ (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. japonica GN=GAPC PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.401e-57
Identity = 107/140 (76.43%), Postives = 117/140 (83.57%), Query Frame = 3
Query:   87 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 506
            KIKIGINGFGRIGRLVARVALQ +DVELVAVNDPFI+TDYMTYMFKYD+VHGQWKH+++K+KD KTLL GEKPV VFG RNP+EIPWA+ GAEYVVESTGVFT               VVISAPSKDAPMFV GVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKY 142          
BLAST of EY729382 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. indica GN=GAPC PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.401e-57
Identity = 107/140 (76.43%), Postives = 117/140 (83.57%), Query Frame = 3
Query:   87 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 506
            KIKIGINGFGRIGRLVARVALQ +DVELVAVNDPFI+TDYMTYMFKYD+VHGQWKH+++K+KD KTLL GEKPV VFG RNP+EIPWA+ GAEYVVESTGVFT               VVISAPSKDAPMFV GVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKY 142          
BLAST of EY729382 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 5.349e-57
Identity = 109/143 (76.22%), Postives = 118/143 (82.52%), Query Frame = 3
Query:   87 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 515
            K+K+GINGFGRIGRLVARV LQRDD ELVAVNDPFISTDYMTYMFKYDSVHGQ K +E+K+KDEKTLLFGE PVAVFG RNPEEIPW + GA++VVESTGVFT               VVISAPSKDAPMFVVGVNE EYK +
Sbjct:    3 KVKVGINGFGRIGRLVARVILQRDDCELVAVNDPFISTDYMTYMFKYDSVHGQCKSHEIKLKDEKTLLFGETPVAVFGCRNPEEIPWGQAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSD 145          
The following BLAST results are available for this feature:
BLAST of EY729382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
G3PC_PEA5.715e-5977.62Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_DIACA5.715e-5978.17Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PINSY2.836e-5875.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_TOBAC4.838e-5882.84Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PD_MAIZE1.408e-5777.14Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PX_HORVU1.838e-5776.43Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_TAXBA1.838e-5775.68Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSJ2.401e-5776.43Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSI2.401e-5776.43Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MESCR5.349e-5776.22Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-016-B12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729382 ID=EY729382; Name=EY729382; organism=Citrus sinensis; type=EST; length=517bp
CCACGCGTCCGCCCAGCGAAAATCGCAGCGTTAAACAAACCTTCACTACT
TTCTCATTTTCGATAATATCAATGGCCGGAGACAAGAAGATCAAGATCGG
AATCAACGGTTTCGGAAGGATCGGCCGTTTGGTTGCGAGAGTCGCACTCC
AGAGGGATGATGTGGAGCTGGTGGCTGTCAACGATCCTTTCATCTCCACT
GATTACATGACATACATGTTTAAGTACGATAGTGTTCACGGTCAGTGGAA
GCACAACGAGTTGAAGGTCAAGGACGAGAAGACCCTCCTCTTCGGTGAGA
AGCCAGTCGCTGTTTTCGGATTCAGGAACCCAGAGGAGATCCCATGGGCA
AAGACTGGAGCCGAGTATGTTGTGGAATCAACTGGAGTGTTCACTGACAA
GGACAAGGCTGCTGCTCACTTGAAGGGTGGTGCCAAGAAGGTCGTTATCT
CCGCCCCTAGCAAGGATGCTCCCATGTTTGTTGTGGGCGTCAACGAGAAA
GAATACAAGCCAGAGCT
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