EY729380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729380 vs. ExPASy Swiss-Prot
Match: RNPH_ECOBW (Ribonuclease PH OS=Escherichia coli (strain K12 / BW2952) GN=rph PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.287e-34 Identity = 79/124 (63.71%), Postives = 95/124 (76.61%), Query Frame = 1 Query: 1 CDVIQADGGTRTASITGAMVALVDALKVIKKRGGLKGGDPLKQMIAAVSVGMYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPADLNAMLALAQKGMTEIFELQNAALAD 372 CDV+QADGGTRTASITGA VALVDAL+ + + G LK +P+K M+AAVSVG+ GE V DL+Y+EDSAAETD+NVVMT G IEVQGTAEG PF +L +LALA+ G+ I Q AALA+ Sbjct: 116 CDVLQADGGTRTASITGACVALVDALQKLVENGKLKT-NPMKGMVAAVSVGIVNGEAVCDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLILLALARGGIESIVATQKAALAN 238
BLAST of EY729380 vs. ExPASy Swiss-Prot
Match: RNPH_BURTA (Ribonuclease PH OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=rph PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.287e-34 Identity = 75/122 (61.48%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 1 CDVIQADGGTRTASITGAMVALVDALKVIKKRGGLKGGDPLKQMIAAVSVGMYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPADLNAMLALAQKGMTEIFELQNAAL 366 CDVIQADGGTRTASITGA VA DA+ + G + P+ +AA+SVG++ G PVLDLDY EDSA +TD+NVVMT GGF+EVQGTAEG PF A++NA+L LAQ G+ E+ LQ AAL Sbjct: 121 CDVIQADGGTRTASITGAFVAAHDAVTKLVAAGKI-ARSPITDYVAAISVGVFGGAPVLDLDYDEDSACDTDMNVVMTGAGGFVEVQGTAEGVPFSRAEMNALLDLAQAGIGELVRLQRAAL 241
BLAST of EY729380 vs. ExPASy Swiss-Prot
Match: RNPH_BURPS (Ribonuclease PH OS=Burkholderia pseudomallei GN=rph PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.287e-34 Identity = 75/122 (61.48%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 1 CDVIQADGGTRTASITGAMVALVDALKVIKKRGGLKGGDPLKQMIAAVSVGMYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPADLNAMLALAQKGMTEIFELQNAAL 366 CDVIQADGGTRTASITGA VA DA+ + G + P+ +AA+SVG++ G PVLDLDY EDSA +TD+NVVMT GGF+EVQGTAEGAPF ++NA+L LAQ G+ E+ LQ AAL Sbjct: 121 CDVIQADGGTRTASITGAFVAAHDAVTKLVAAGRI-ARSPITDYVAAISVGVFGGTPVLDLDYDEDSACDTDMNVVMTGAGGFVEVQGTAEGAPFSRTEMNALLDLAQAGIGELVRLQRAAL 241
BLAST of EY729380 vs. ExPASy Swiss-Prot
Match: RNPH_BURP0 (Ribonuclease PH OS=Burkholderia pseudomallei (strain 1106a) GN=rph PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.287e-34 Identity = 75/122 (61.48%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 1 CDVIQADGGTRTASITGAMVALVDALKVIKKRGGLKGGDPLKQMIAAVSVGMYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPADLNAMLALAQKGMTEIFELQNAAL 366 CDVIQADGGTRTASITGA VA DA+ + G + P+ +AA+SVG++ G PVLDLDY EDSA +TD+NVVMT GGF+EVQGTAEGAPF ++NA+L LAQ G+ E+ LQ AAL Sbjct: 121 CDVIQADGGTRTASITGAFVAAHDAVTKLVAAGRI-ARSPITDYVAAISVGVFGGTPVLDLDYDEDSACDTDMNVVMTGAGGFVEVQGTAEGAPFSRTEMNALLDLAQAGIGELVRLQRAAL 241
BLAST of EY729380 vs. ExPASy Swiss-Prot
Match: RNPH_BURMA (Ribonuclease PH OS=Burkholderia mallei GN=rph PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.287e-34 Identity = 75/122 (61.48%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 1 CDVIQADGGTRTASITGAMVALVDALKVIKKRGGLKGGDPLKQMIAAVSVGMYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPADLNAMLALAQKGMTEIFELQNAAL 366 CDVIQADGGTRTASITGA VA DA+ + G + P+ +AA+SVG++ G PVLDLDY EDSA +TD+NVVMT GGF+EVQGTAEGAPF ++NA+L LAQ G+ E+ LQ AAL Sbjct: 121 CDVIQADGGTRTASITGAFVAAHDAVTKLVAAGRI-ARSPITDYVAAISVGVFGGTPVLDLDYDEDSACDTDMNVVMTGAGGFVEVQGTAEGAPFSRTEMNALLDLAQAGIGELVRLQRAAL 241
BLAST of EY729380 vs. ExPASy Swiss-Prot
Match: RNPH_BURM9 (Ribonuclease PH OS=Burkholderia mallei (strain NCTC 10229) GN=rph PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.287e-34 Identity = 75/122 (61.48%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 1 CDVIQADGGTRTASITGAMVALVDALKVIKKRGGLKGGDPLKQMIAAVSVGMYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPADLNAMLALAQKGMTEIFELQNAAL 366 CDVIQADGGTRTASITGA VA DA+ + G + P+ +AA+SVG++ G PVLDLDY EDSA +TD+NVVMT GGF+EVQGTAEGAPF ++NA+L LAQ G+ E+ LQ AAL Sbjct: 121 CDVIQADGGTRTASITGAFVAAHDAVTKLVAAGRI-ARSPITDYVAAISVGVFGGTPVLDLDYDEDSACDTDMNVVMTGAGGFVEVQGTAEGAPFSRTEMNALLDLAQAGIGELVRLQRAAL 241
BLAST of EY729380 vs. ExPASy Swiss-Prot
Match: RNPH_BURM7 (Ribonuclease PH OS=Burkholderia mallei (strain NCTC 10247) GN=rph PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.287e-34 Identity = 75/122 (61.48%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 1 CDVIQADGGTRTASITGAMVALVDALKVIKKRGGLKGGDPLKQMIAAVSVGMYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPADLNAMLALAQKGMTEIFELQNAAL 366 CDVIQADGGTRTASITGA VA DA+ + G + P+ +AA+SVG++ G PVLDLDY EDSA +TD+NVVMT GGF+EVQGTAEGAPF ++NA+L LAQ G+ E+ LQ AAL Sbjct: 121 CDVIQADGGTRTASITGAFVAAHDAVTKLVAAGRI-ARSPITDYVAAISVGVFGGTPVLDLDYDEDSACDTDMNVVMTGAGGFVEVQGTAEGAPFSRTEMNALLDLAQAGIGELVRLQRAAL 241
BLAST of EY729380 vs. ExPASy Swiss-Prot
Match: RNPH_ALISL (Ribonuclease PH OS=Aliivibrio salmonicida (strain LFI1238) GN=rph PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.287e-34 Identity = 79/124 (63.71%), Postives = 95/124 (76.61%), Query Frame = 1 Query: 1 CDVIQADGGTRTASITGAMVALVDALKVIKKRGGLKGGDPLKQMIAAVSVGMYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPADLNAMLALAQKGMTEIFELQNAALAD 372 CDVIQADGGTRTASITGA VAL DA+ + G LK +P+K +AAVSVG+Y+GE + DL+YLEDSAA+TD+NVVM G IEVQGTAE APF +L MLALAQ+G+ +I E Q AALA+ Sbjct: 116 CDVIQADGGTRTASITGASVALADAINHMIASGKLKK-NPMKGHVAAVSVGIYKGEAICDLEYLEDSAADTDMNVVMMEDGKMIEVQGTAEVAPFSHQELLDMLALAQQGINDIIEKQKAALAE 238
BLAST of EY729380 vs. ExPASy Swiss-Prot
Match: RNPH_VIBF1 (Ribonuclease PH OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=rph PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.293e-34 Identity = 78/124 (62.90%), Postives = 94/124 (75.81%), Query Frame = 1 Query: 1 CDVIQADGGTRTASITGAMVALVDALKVIKKRGGLKGGDPLKQMIAAVSVGMYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPADLNAMLALAQKGMTEIFELQNAALAD 372 CDVIQADGGTRTASITGA VAL DA+ + G LK +P+K +AAVSVG+Y GE + DL+Y+EDSAA+TD+NVVM G IEVQGTAE APF +L MLALAQ+G+ +I E Q AALA+ Sbjct: 116 CDVIQADGGTRTASITGASVALADAINHMIATGKLKS-NPMKGHVAAVSVGIYNGEAICDLEYVEDSAADTDMNVVMMEDGKMIEVQGTAEEAPFSHQELLDMLALAQQGINDIIEKQKAALAE 238
BLAST of EY729380 vs. ExPASy Swiss-Prot
Match: RNPH_RALEH (Ribonuclease PH OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=rph PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.293e-34 Identity = 74/122 (60.66%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 1 CDVIQADGGTRTASITGAMVALVDALKVIKKRGGLKGGDPLKQMIAAVSVGMYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPADLNAMLALAQKGMTEIFELQNAAL 366 CDV+QADGGTRTA+ITGA VA DA+ + R GL P++ +AAVSVGM G PVLDLDY EDS+ +TD+NVVMT +GGF+EVQGTAEGAPF ADL+AM LA+ G+ + + Q AL Sbjct: 116 CDVLQADGGTRTAAITGAFVAAHDAVSTML-RDGLIAASPIRDHVAAVSVGMVDGVPVLDLDYAEDSSCDTDMNVVMTGSGGFVEVQGTAEGAPFSRADLDAMTRLAEAGIARLVQHQREAL 236 The following BLAST results are available for this feature:
BLAST of EY729380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729380 ID=EY729380; Name=EY729380; organism=Citrus sinensis; type=EST; length=834bpback to top |