EY729351

Overview
NameEY729351
Unique NameEY729351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length567
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729351 vs. ExPASy Swiss-Prot
Match: SYQ_YERPE (Glutaminyl-tRNA synthetase OS=Yersinia pestis GN=glnS PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 3
Query:   54 KPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRTVTLKDSF 359
            K KGV+HWV+      + L  E+RL+++LFN  NPA  +D+LS +NP+S +VI + + EPSL  A     +QFER GYF  D + S P  LVFNRTV L+D++
Sbjct:  452 KVKGVIHWVSV----AHALPAEIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRTVGLRDTW 549          
BLAST of EY729351 vs. ExPASy Swiss-Prot
Match: SYQ_YERPB (Glutaminyl-tRNA synthetase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=glnS PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 3
Query:   54 KPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRTVTLKDSF 359
            K KGV+HWV+      + L  E+RL+++LFN  NPA  +D+LS +NP+S +VI + + EPSL  A     +QFER GYF  D + S P  LVFNRTV L+D++
Sbjct:  452 KVKGVIHWVSV----AHALPAEIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRTVGLRDTW 549          
BLAST of EY729351 vs. ExPASy Swiss-Prot
Match: SYQ_YERPA (Glutaminyl-tRNA synthetase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=glnS PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 3
Query:   54 KPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRTVTLKDSF 359
            K KGV+HWV+      + L  E+RL+++LFN  NPA  +D+LS +NP+S +VI + + EPSL  A     +QFER GYF  D + S P  LVFNRTV L+D++
Sbjct:  452 KVKGVIHWVSV----AHALPAEIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRTVGLRDTW 549          
BLAST of EY729351 vs. ExPASy Swiss-Prot
Match: SYQ_YERP3 (Glutaminyl-tRNA synthetase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=glnS PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 3
Query:   54 KPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRTVTLKDSF 359
            K KGV+HWV+      + L  E+RL+++LFN  NPA  +D+LS +NP+S +VI + + EPSL  A     +QFER GYF  D + S P  LVFNRTV L+D++
Sbjct:  452 KVKGVIHWVSV----AHALPAEIRLYDRLFNVPNPAAAEDFLSTINPES-LVIRQGFVEPSLADAVSDKTYQFEREGYFCADSRYSRPGALVFNRTVGLRDTW 549          
BLAST of EY729351 vs. ExPASy Swiss-Prot
Match: SYQ_ALISL (Glutaminyl-tRNA synthetase OS=Aliivibrio salmonicida (strain LFI1238) GN=glnS PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.046e-17
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 3
Query:   54 KPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRTVTLKDSF 359
            K KGV+HWV+           E+RL+++LF   N A L+D+   +NP+S ++  + + EPSL +A     +QFER GYF +D KDSTPE LVFNRTV L+D++
Sbjct:  453 KVKGVIHWVSADKA----FPAEIRLYDRLFTVPNSAALEDFSESINPES-LITKQGFVEPSLVTAEAEAGYQFERTGYFCIDNKDSTPEALVFNRTVGLRDTW 550          
BLAST of EY729351 vs. ExPASy Swiss-Prot
Match: SYQ_VIBVY (Glutaminyl-tRNA synthetase OS=Vibrio vulnificus (strain YJ016) GN=glnS PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.366e-17
Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = 3
Query:   54 KPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRTVTLKDSFPK 365
            K +GV+HWV+        +  E+RL+++LF   NPA  DD+ S +NP+S  V+   + EPSL  A     +QFER+GYF  D KDS+ E LVFNRTV L+D++ K
Sbjct:  453 KVRGVIHWVSADKG----VPAEIRLYDRLFTVPNPAAADDFASTINPESLTVM-NGFVEPSLVEAEAEKGYQFERMGYFCADSKDSSKEHLVFNRTVGLRDTWAK 552          
BLAST of EY729351 vs. ExPASy Swiss-Prot
Match: SYQ_IDILO (Glutaminyl-tRNA synthetase OS=Idiomarina loihiensis GN=glnS PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.366e-17
Identity = 47/105 (44.76%), Postives = 71/105 (67.62%), Query Frame = 3
Query:   54 KPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPE-KLVFNRTVTLKDSFPK 365
            K KGV+HWV+  +        E R++++LF   NPA  +D  S LNP+S +VI + + E +L SA +G+ FQFERLGY+ +D+D+  E +L+FN+TV L+DS+ K
Sbjct:  453 KVKGVIHWVSAETAKA----AEFRVYDRLFQVPNPAAEEDLFSTLNPES-LVIKKGFVEANLASAKLGENFQFERLGYYCLDQDAETEGRLIFNQTVGLRDSWAK 552          
BLAST of EY729351 vs. ExPASy Swiss-Prot
Match: SYQ_ERWT9 (Glutaminyl-tRNA synthetase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=glnS PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.366e-17
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 3
Query:   54 KPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDK-DSTPEKLVFNRTVTLKDSFPKGGK 374
            K KGV+HWV+      + L  E RL+++LF+  NPA  +D+L+ +NP+S +VI + + EP +  A     +QFER GYF  D   ST  KLVFNRTV L+D++ K G+
Sbjct:  453 KVKGVIHWVSAE----HALLAEFRLYDRLFSVPNPAAAEDFLTTINPES-LVIRQGFVEPGMQQALASAPYQFEREGYFCADSVYSTSNKLVFNRTVGLRDTWAKNGE 555          
BLAST of EY729351 vs. ExPASy Swiss-Prot
Match: SYQ_YERE8 (Glutaminyl-tRNA synthetase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glnS PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.043e-17
Identity = 47/103 (45.63%), Postives = 68/103 (66.02%), Query Frame = 3
Query:   54 KPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKD-STPEKLVFNRTVTLKDSF 359
            K KGV+HWV+      + L  E+RL+++LF+  NPA  +D+LS +NP+S ++I + + EPSL  A     +QFER GYF  D   S P+ LVFNRTV L+D++
Sbjct:  452 KVKGVIHWVSVK----HALPAEIRLYDRLFSVPNPAAAEDFLSTINPES-LIIRQGFVEPSLADAVPEKTYQFEREGYFCADSHYSRPDALVFNRTVGLRDTW 549          
BLAST of EY729351 vs. ExPASy Swiss-Prot
Match: SYQ_SERP5 (Glutaminyl-tRNA synthetase OS=Serratia proteamaculans (strain 568) GN=glnS PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.043e-17
Identity = 48/107 (44.86%), Postives = 71/107 (66.36%), Query Frame = 3
Query:   54 KPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRTVTLKDSFPKGG 371
            K KGV+HWV+      + L  E+R++++LF+  NPA  +D+L+ +NP+S +VI   + EPSL +A     +QFER GYF  D + S+ E LVFNRTV L+D++ K G
Sbjct:  452 KVKGVIHWVSAE----HALPAEIRVYDRLFSVPNPAAAEDFLTTINPES-LVIKHGFVEPSLAAAQPEKAYQFEREGYFCADNRHSSAEHLVFNRTVGLRDTWAKIG 553          
The following BLAST results are available for this feature:
BLAST of EY729351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
SYQ_YERPE1.046e-1747.57Glutaminyl-tRNA synthetase OS=Yersinia pestis GN=g... [more]
SYQ_YERPB1.046e-1747.57Glutaminyl-tRNA synthetase OS=Yersinia pseudotuber... [more]
SYQ_YERPA1.046e-1747.57Glutaminyl-tRNA synthetase OS=Yersinia pestis bv. ... [more]
SYQ_YERP31.046e-1747.57Glutaminyl-tRNA synthetase OS=Yersinia pseudotuber... [more]
SYQ_ALISL1.046e-1745.63Glutaminyl-tRNA synthetase OS=Aliivibrio salmonici... [more]
SYQ_VIBVY1.366e-1745.71Glutaminyl-tRNA synthetase OS=Vibrio vulnificus (s... [more]
SYQ_IDILO1.366e-1744.76Glutaminyl-tRNA synthetase OS=Idiomarina loihiensi... [more]
SYQ_ERWT91.366e-1744.44Glutaminyl-tRNA synthetase OS=Erwinia tasmaniensis... [more]
SYQ_YERE83.043e-1745.63Glutaminyl-tRNA synthetase OS=Yersinia enterocolit... [more]
SYQ_SERP53.043e-1744.86Glutaminyl-tRNA synthetase OS=Serratia proteamacul... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-015-G07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729351 ID=EY729351; Name=EY729351; organism=Citrus sinensis; type=EST; length=567bp
CCACGCGTCCGATTCTTCACATTCCGGGCTGAATATGATCCTTCCAAAAA
GACAAACCAAAGGGAGTTCTTCACTGGGTTGCTGAGCCTTCCCCTGGTGT
CAATCCACTAAGGGTGGAAGTCAGATTGTTTGAAAAATTGTTCAACTCTG
AGAATCCTGCAGAACTTGATGATTGGCTTTCTGATTTGAATCCGGATTCC
AAAGTGGTGATTCCTGAAGCATATGCAGAACCATCACTTCACAGTGCTGC
TGTCGGGGACAGATTCCAATTTGAAAGGCTAGGGTACTTTGCAGTTGATA
AGGATTCCACTCCGGAGAAACTTGTTTTCAACCGGACAGTCACACTAAAA
GATAGCTTTCCCAAAGGTGGGAAGTAGGAAGTAGGACCCTTGCAAATGGA
AAACAGATGGAGCATTAGATGGGCTATTACTATGAGCTGCTTCTTACTTG
TTATGAAAATTTTATACCTGTGTAAAAATATCATTCACTAAATCTTGCAA
GATATTTTAGGTTATAATTGAAGTTTTGCTTGATACTANNNNNAAAAAAA
AAAAAAAAAAAAAAAAA
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