EY729329

Overview
NameEY729329
Unique NameEY729329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729329 vs. ExPASy Swiss-Prot
Match: CBR1_MACFA (Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.611e-18
Identity = 61/163 (37.42%), Postives = 91/163 (55.83%), Query Frame = 1
Query:   34 RYAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMVK 516
            R A+VTG+NKGIG  +VR L    +G + VLTARD   G  AV++L+  G  +  FHQLD+ D  +I ++ DF+   +G LD+LVNNAGI    +D                 T  +  AE  ++TN+ G + +C  L+PL++     R+VN+SS +    +K
Sbjct:    6 RVALVTGSNKGIGLAIVRDLCRLFSGEV-VLTARDVARGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRTLRDFLLKEYGGLDVLVNNAGIAFKVADP----------------TPFHIQAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNISSMMSLRALK 148          
BLAST of EY729329 vs. ExPASy Swiss-Prot
Match: CBR3_HUMAN (Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CBR3 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 5.215e-17
Identity = 58/158 (36.71%), Postives = 86/158 (54.43%), Query Frame = 1
Query:   25 SIFRYAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 492
            S  R A+VTGAN+GIG  + R+L    +G + VLTARD   G  AV++L+  G  +  FHQLD+ D  +I ++ DF+R  +G L++LVNNA +   S D                       AE  L+TN+   + MC  L+P+++     R+VN+SS
Sbjct:    3 SCSRVALVTGANRGIGLAIARELCRQFSGDV-VLTARDVARGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFD----------------IKAEMTLKTNFFATRNMCNELLPIMK--PHGRVVNISS 140          
BLAST of EY729329 vs. ExPASy Swiss-Prot
Match: CBR1_RABIT (Carbonyl reductase [NADPH] 1 OS=Oryctolagus cuniculus GN=CBR1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.811e-17
Identity = 58/155 (37.42%), Postives = 88/155 (56.77%), Query Frame = 1
Query:   34 RYAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 492
            R A+VTGANKG+G+ + R L    +G + +LTA+DE  G  AV++L+  G  +  FHQLD+ D  +I ++ DF+R  +G L++LVNNA I     D                 T  +  AE  ++TN+ G + +C  L+PL++     R+VNVSS
Sbjct:    6 RVALVTGANKGVGFAITRALCRLFSGDV-LLTAQDEAQGQAAVQQLQAEGL-SPRFHQLDITDLQSIRALRDFLRRAYGGLNVLVNNAVIAFKMEDT----------------TPFHIQAEVTMKTNFDGTRDVCTELLPLMR--PGGRVVNVSS 140          
BLAST of EY729329 vs. ExPASy Swiss-Prot
Match: DHR13_BOVIN (Dehydrogenase/reductase SDR family member 13 OS=Bos taurus GN=DHRS13 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.961e-12
Identity = 56/166 (33.73%), Postives = 79/166 (47.59%), Query Frame = 1
Query:    1 PRVRGTLYSIFRYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS 495
            P  RG      R AVVTGAN GIG     +LA  G   VL  R  E+G   A +  + SG + VIF  LD+A  A++ + A    S   +LDIL++NAGI+                       +T E     L+ N++G   +   L+P L+ S  +R+V VSS+
Sbjct:   26 PPCRGLASLRGRTAVVTGANSGIGKMTALELARRGARVVLACRSRERGEAAAFDLRQESGNNEVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGISSCG--------------------RTREPFNLLLRVNHIGPFLLTHLLLPRLKTSAPSRVVVVSSA 171          
BLAST of EY729329 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.597e-12
Identity = 53/155 (34.19%), Postives = 80/155 (51.61%), Query Frame = 1
Query:   40 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK 504
            A+VTGA  GIG  + R+LA  G  T L ARDE+   + V++L+  GFD V     DVADPA I +        +G +DILVNNAG +G  + A+ ++  +   V    +T  +   ++ L    + AK+               RI+N++S+ GK
Sbjct:   20 ALVTGATSGIGLAIARRLAALGARTFLCARDEERLAQTVKELRGEGFD-VDGTVCDVADPAQIRAYVAAAVQRYGTVDILVNNAGRSGGGATAE-IADELWLDVITTNLTSVFLMTKEVLNAGGMLAKK-------------RGRIINIASTGGK 159          
BLAST of EY729329 vs. ExPASy Swiss-Prot
Match: DHR13_HUMAN (Dehydrogenase/reductase SDR family member 13 OS=Homo sapiens GN=DHRS13 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 55/171 (32.16%), Postives = 83/171 (48.54%), Query Frame = 1
Query:   34 RYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL---GKLMVKQFYSPL 534
            R AVVTGAN GIG     +LA  G   VL  R  E+G   A +  + SG + VIF  LD+A  A++ + A    S   +LDIL++NAGI+                       +T E+    L+ N++G   +   L+P L+    +R+V V+S+    G+L  K+   P+
Sbjct:   37 RTAVVTGANSGIGKMTALELARRGARVVLACRSQERGEAAAFDLRQESGNNEVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGISSCG--------------------RTREAFNLLLRVNHIGPFLLTHLLLPCLKACAPSRVVVVASAAHCRGRLDFKRLDRPV 187          
BLAST of EY729329 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.919e-11
Identity = 51/158 (32.28%), Postives = 77/158 (48.73%), Query Frame = 1
Query:   34 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 507
            + A+VTGA++GIG  +   LA  G   + TA  E G     + L  +G   +    L+V DPA+I SV + IR+ FG++DILVNNAGIT      D L            M    E     ++TN     R+ +A++  +      RI+ + S +G +
Sbjct:    6 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLM----LNVTDPASIESVLEKIRAEFGEVDILVNNAGIT-----RDNL-----------LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM 143          
BLAST of EY729329 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.919e-11
Identity = 51/158 (32.28%), Postives = 77/158 (48.73%), Query Frame = 1
Query:   34 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 507
            + A+VTGA++GIG  +   LA  G   + TA  E G     + L  +G   +    L+V DPA+I SV + IR+ FG++DILVNNAGIT      D L            M    E     ++TN     R+ +A++  +      RI+ + S +G +
Sbjct:    6 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLM----LNVTDPASIESVLEKIRAEFGEVDILVNNAGIT-----RDNL-----------LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM 143          
BLAST of EY729329 vs. ExPASy Swiss-Prot
Match: DRS7B_RAT (Dehydrogenase/reductase SDR family member 7B OS=Rattus norvegicus GN=Dhrs7b PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.507e-11
Identity = 55/175 (31.43%), Postives = 75/175 (42.86%), Query Frame = 1
Query:    4 RVRGTLYSIFRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ-----LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMV 513
            R R   Y      VVTGA  G+G E  R     G   VL  R+ K   E   +L  S       HQ      D+ADP AI   A  I   FG +DIL+NNAGI+   + +DT+                 +   K ++ NY G   + +AL+P +       IV +SS  GK+ +
Sbjct:   43 RTRSKAYLRNAVVVVTGATSGLGKECARVFHAAGAKVVLCGRNVKALEEFTRELADSSSSQGQTHQPCVVTFDLADPGAIAPAAAEILQCFGYVDILINNAGISYRGAISDTI----------------VDVDRKVMEINYFGPVALTKALLPSMVERKRGHIVAISSIQGKISI 201          
BLAST of EY729329 vs. ExPASy Swiss-Prot
Match: DRS7B_XENTR (Dehydrogenase/reductase SDR family member 7B OS=Xenopus tropicalis GN=dhrs7b PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.276e-11
Identity = 52/176 (29.55%), Postives = 81/176 (46.02%), Query Frame = 1
Query:    4 RVRGTLYSIFRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ-----LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK-CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMV 513
            R+R   Y      V+TGA  G+G E  +     G   VL  R E+G    V++L      +   H+      D++D  A++S A+ I    G++DIL+NNAGI+                  RG +  T  S ++  + TNY G   + +ALIP +  +    IV +SS  GK+ +
Sbjct:   27 RLRSGAYLQDAVVVITGATSGLGRECAKVFYAAGTRLVLCGRSEEGLKNLVQELSQMRIKSAQLHKPHMVIFDLSDVEAVNSAANEILHLTGRVDILINNAGIS-----------------YRGTILDTKVSVDRMVMDTNYFGPVALTKALIPSMIKNRRGHIVVISSVQGKISI 185          
The following BLAST results are available for this feature:
BLAST of EY729329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CBR1_MACFA3.611e-1837.42Carbonyl reductase [NADPH] 1 OS=Macaca fasciculari... [more]
CBR3_HUMAN5.215e-1736.71Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CB... [more]
CBR1_RABIT6.811e-1737.42Carbonyl reductase [NADPH] 1 OS=Oryctolagus cunicu... [more]
DHR13_BOVIN2.961e-1233.73Dehydrogenase/reductase SDR family member 13 OS=Bo... [more]
DHK1_STRVN6.597e-1234.19Granaticin polyketide synthase putative ketoacyl r... [more]
DHR13_HUMAN1.125e-1132.16Dehydrogenase/reductase SDR family member 13 OS=Ho... [more]
FABG_SHIFL1.919e-1132.283-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI1.919e-1132.283-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
DRS7B_RAT2.507e-1131.43Dehydrogenase/reductase SDR family member 7B OS=Ra... [more]
DRS7B_XENTR4.276e-1129.55Dehydrogenase/reductase SDR family member 7B OS=Xe... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-015-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729329 ID=EY729329; Name=EY729329; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGTGGCACACTATATTCTATATTCAGGTATGCAGTTGTTAC
AGGAGCAAATAAGGGAATTGGGTATGAAGTAGTGAGGCAATTGGCTTTAA
ATGGGATCATTACGGTACTAACAGCCAGAGATGAGAAGGGGGGTCTTGAA
GCTGTTGAAAAACTCAAACACTCTGGCTTTGATAATGTGATCTTTCATCA
GCTTGATGTTGCAGACCCTGCTGCTATTCACTCTGTAGCTGATTTCATTC
GAAGTCATTTTGGAAAGCTTGATATTTTGGTAAATAATGCAGGGATTACT
GGAATCAGTTCGGATGCTGATACTTTGTCAGGTTTTATTGAGGAAGGTGT
TGCAAGAGGAAAAATGACTCAAACTTATGAGTCAGCTGAAAAGTGCCTGC
AAACAAACTACTTGGGGGCCAAAAGAATGTGTGAAGCACTCATTCCTCTC
CTCCAGTTATCCGATTCAGCAAGAATTGTTAATGTATCCTCTTCCTTGGG
AAAGTTGATGGTAAAACAGTTTTACAGCCCTTTATAAAATAGACCTAGCT
GACATTCAGGTAGTAATTAAGCCCAATTTGGCCGCTAAATTTTGCTTCCA
CTGCATCTGATATTCCCTTATAATTACCTGTAGATCGATATTGGAGTACT
CCTTGTCTCANATTTTAATTATGATTAAGTTCATTGGAATCATGAAGGTT
GAAATTTCTGGTTCTCATCATTTTCTTTCAGTATGTAACACATGAATGGG
CCCAAGAGTGTTTANTGATGCTGAGAACTCACAGAAGAAAAGTGGATGAG
GTATTGAGCCAGTATCTAATGATTCAAAGAGGTTCACCGAAACTAAAGAT
GGCTGCTATGCACTGCTTACTACTACAAAGCACTAT
back to top