EY729297

Overview
NameEY729297
Unique NameEY729297
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_ECOBR (HTH-type transcriptional regulator murR OS=Escherichia coli (strain B / REL606) GN=murR PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.171e-17
Identity = 60/209 (28.71%), Postives = 99/209 (47.37%), Query Frame = -2
Query:   25 IAPSGHLIRTSEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 630
            I+ +G     +E K+AD +    +  +       A  +GIS+ +IV+F + +G  GF +L++ L    +A        A     +I  DDS+   + K+       L +     D   LQK +  +S+AQ ++  G G S  V  D   K  ++    A  +D H+QA  +  LK  DV I IS SG  K++++ A   R+ GAT+I +
Sbjct:    7 ISNAGSEFTENEQKIADFLRARVSELKSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALFDYARLQKIIDVISKAQFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAI 215          
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_ECOBB (HTH-type transcriptional regulator murR OS=Escherichia coli (strain B / BL21) GN=murR PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.171e-17
Identity = 60/209 (28.71%), Postives = 99/209 (47.37%), Query Frame = -2
Query:   25 IAPSGHLIRTSEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 630
            I+ +G     +E K+AD +    +  +       A  +GIS+ +IV+F + +G  GF +L++ L    +A        A     +I  DDS+   + K+       L +     D   LQK +  +S+AQ ++  G G S  V  D   K  ++    A  +D H+QA  +  LK  DV I IS SG  K++++ A   R+ GAT+I +
Sbjct:    7 ISNAGSEFTENEQKIADFLRARVSELKSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALFDYARLQKIIDVISKAQFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAI 215          
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_ESCF3 (HTH-type transcriptional regulator murR OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=murR PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.293e-17
Identity = 59/199 (29.65%), Postives = 95/199 (47.74%), Query Frame = -2
Query:   25 SEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 600
            +E K+AD +    +  +       A  +GIS+ +IV+F + +G  GF +L++ L    +A        A     +I  DDS+   + K+       L +    LD   LQK +  +S+A  ++  G G S  V  D   K  ++    A  +D H+QA  +  LK  DV I IS SG  K++L+ A   R+ GAT+I +
Sbjct:   17 NEQKIADFLQAKVSELKSVSSRKMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEILLCAEAARKQGATVIAI 215          
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_ECO55 (HTH-type transcriptional regulator murR OS=Escherichia coli (strain 55989 / EAEC) GN=murR PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.293e-17
Identity = 59/209 (28.23%), Postives = 99/209 (47.37%), Query Frame = -2
Query:   25 IAPSGHLIRTSEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 630
            I+ +G     +E K+AD +  + +  +       A  +GIS+ +IV+F + +G  GF +L++ L    +A        A     +I  DDS+   + K+       L +     D   LQK +  +S+A  ++  G G S  V  D   K  ++    A  +D H+QA  +  LK  DV I IS SG  K++++ A   R+ GAT+I +
Sbjct:    7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCSLFDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAI 215          
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_SHIB3 (HTH-type transcriptional regulator murR OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=murR PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.214e-16
Identity = 59/209 (28.23%), Postives = 99/209 (47.37%), Query Frame = -2
Query:   25 IAPSGHLIRTSEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 630
            I+ +G     +E K+AD +  + +  +       A  +GIS+ +IV+F + +G  GF +L++ L    +A        A     +I  DDS+   + K+       L +     D   LQK +  +S+A  ++  G G S  V  D   K  ++    A  +D H+QA  +  LK  DV I IS SG  K++++ A   R+ GAT+I +
Sbjct:    7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNTTALHLHSSITSDDSLEVIARKLNREKELALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAI 215          
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_ECOSE (HTH-type transcriptional regulator murR OS=Escherichia coli (strain SE11) GN=murR PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.214e-16
Identity = 59/209 (28.23%), Postives = 99/209 (47.37%), Query Frame = -2
Query:   25 IAPSGHLIRTSEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 630
            I+ +G     +E K+AD +  + +  +       A  +GIS+ +IV+F + +G  GF +L++ L    +A        A     +I  DDS+   + K+       L +     D   LQK +  +S+A  ++  G G S  V  D   K  ++    A  +D H+QA  +  LK  DV I IS SG  K++++ A   R+ GAT+I +
Sbjct:    7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAI 215          
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_ECO8A (HTH-type transcriptional regulator murR OS=Escherichia coli O8 (strain IAI1) GN=murR PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.214e-16
Identity = 59/209 (28.23%), Postives = 99/209 (47.37%), Query Frame = -2
Query:   25 IAPSGHLIRTSEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 630
            I+ +G     +E K+AD +  + +  +       A  +GIS+ +IV+F + +G  GF +L++ L    +A        A     +I  DDS+   + K+       L +     D   LQK +  +S+A  ++  G G S  V  D   K  ++    A  +D H+QA  +  LK  DV I IS SG  K++++ A   R+ GAT+I +
Sbjct:    7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAI 215          
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_ECO24 (HTH-type transcriptional regulator murR OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=murR PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.214e-16
Identity = 59/209 (28.23%), Postives = 99/209 (47.37%), Query Frame = -2
Query:   25 IAPSGHLIRTSEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 630
            I+ +G     +E K+AD +  + +  +       A  +GIS+ +IV+F + +G  GF +L++ L    +A        A     +I  DDS+   + K+       L +     D   LQK +  +S+A  ++  G G S  V  D   K  ++    A  +D H+QA  +  LK  DV I IS SG  K++++ A   R+ GAT+I +
Sbjct:    7 ISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAI 215          
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_ECOSM (HTH-type transcriptional regulator murR OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=murR PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.585e-16
Identity = 57/199 (28.64%), Postives = 95/199 (47.74%), Query Frame = -2
Query:   25 SEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 600
            +E K+AD +  + +  +       A  +GIS+ +IV+F + +G  GF +L++ L    +A        A     +I  DDS+   + K+       L +     D   LQK +  +S+A  ++  G G S  V  D   K  ++    A  +D H+QA  +  LK  DV I IS SG  K++++ A   R+ GAT+I +
Sbjct:   17 NEQKIADFLRANVSELKSVSSRKMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKEQALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAI 215          
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_ECO5T (HTH-type transcriptional regulator murR OS=Escherichia coli O157:H7 (strain TW14359 / EHEC) GN=murR PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.585e-16
Identity = 57/199 (28.64%), Postives = 95/199 (47.74%), Query Frame = -2
Query:   25 SEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 600
            +E K+AD +  + +  +       A  +GIS+ +IV+F + +G  GF +L++ L    +A        A     +I  DDS+   + K+       L +     D   LQK +  +S+A  ++  G G S  V  D   K  ++    A  +D H+QA  +  LK  DV I IS SG  K++++ A   R+ GAT+I +
Sbjct:   17 NEQKIADFLRANVSELKSVSSRKMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATAQHLHSSITSDDSLEVIARKLNREKELALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGCDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAI 215          
The following BLAST results are available for this feature:
BLAST of EY729297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
MURR_ECOBR4.171e-1728.71HTH-type transcriptional regulator murR OS=Escheri... [more]
MURR_ECOBB4.171e-1728.71HTH-type transcriptional regulator murR OS=Escheri... [more]
MURR_ESCF39.293e-1729.65HTH-type transcriptional regulator murR OS=Escheri... [more]
MURR_ECO559.293e-1728.23HTH-type transcriptional regulator murR OS=Escheri... [more]
MURR_SHIB31.214e-1628.23HTH-type transcriptional regulator murR OS=Shigell... [more]
MURR_ECOSE1.214e-1628.23HTH-type transcriptional regulator murR OS=Escheri... [more]
MURR_ECO8A1.214e-1628.23HTH-type transcriptional regulator murR OS=Escheri... [more]
MURR_ECO241.214e-1628.23HTH-type transcriptional regulator murR OS=Escheri... [more]
MURR_ECOSM1.585e-1628.64HTH-type transcriptional regulator murR OS=Escheri... [more]
MURR_ECO5T1.585e-1628.64HTH-type transcriptional regulator murR OS=Escheri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-015-B01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729297 ID=EY729297; Name=EY729297; organism=Citrus sinensis; type=EST; length=910bp
CGCCAATGGCGTCTGGCTCGGGCACAGGGTAATCAGGGTCGCGCCGCTTT
CACGCACCAGGTTGGCGGTGATCAGCAAATCCTTGGAGCGGCCGGACTGG
GAAATGCAGATCGCCACGTCGGTGGGCTTCAACGTCACTGCCGACATCGC
CTGCATGTGCGGGTCGCTGTAGGCCGCCGCCGTCAGCAGCAAACGGAAGA
ACTTGTGCTGGGCATCCGCCGCCACCGCACCGGACGCGCCGAAACCATAG
AACTCCACGCGCTGGGCCTGGGACATGGCGGTCACGGCTTTTTGCAGCTC
TACCGGGTCAAGCTTTTCCCGCACTTCCATCAGGGTATGCAGGGTGGTGT
CGAAAATTTTCAGGCTGTANTCGGCGACGGAGTCGTCTTCGTGAATCGCG
AACTGCCCGAAGCTCGCACCGGCGGCGAGGCTCTGGGCCAGCTTGAGCTT
CAAGTCCTGGAACCCGGAGCAACCAATGGCGCGGCAGAAGCGCACGATGG
TCGGCTCGCTGATTCCCACGCTGTGGGCCGAGTCCGCCATGGGACTGTGC
CTTCAAGCCGCAGGGTCATGCAGCACGTGATCGGCAACCTTGATTTCCGA
TGTGCGTATCAGGTGGCCCGACGGGGCGATATGTTGCACAGGGTCCAAGG
GCTGGGACTCTGTTGTGGGCGGACGCCGGGGAGGTAGCGCGCGGTGGGTG
GGGGGGCCTCAGTACCGCTAGGGCCGGCGATGCGTCGGTTAGTGGGGCGT
TGCCGGTGAGACGGGCGAGGGACCGTGGAGCCCGCCGTGGGGTGGCGTCC
ACGATGGAAACGCGGATGGTGGTAGCAAACGGAGAAACGCCGGCTCCGCG
GACGGTCGAGGTGAGCGGGCGCTGCTGGGGACGCCGCTGCGGGGAGTGAG
CGGAAGGGGT
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