EY729297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_SHIDS (HTH-type transcriptional regulator murR OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=murR PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.027e-15 Identity = 56/199 (28.14%), Postives = 94/199 (47.24%), Query Frame = -2 Query: 25 SEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 600 +E K+AD + + + + A +GIS+ +IV+F + +G GF +L++ L +A A +I DDS+ + K+ L + D LQK + +S+A ++ G G S V D K ++ +D H+QA + LK DV I IS SG K++++ A R+ GAT+I + Sbjct: 17 NEQKIADFLRANVSELKSVSSRKMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVTCEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAI 215
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: YFHH_ECOLI (Uncharacterized HTH-type transcriptional regulator yfhH OS=Escherichia coli (strain K12) GN=yfhH PE=4 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.753e-15 Identity = 53/196 (27.04%), Postives = 92/196 (46.94%), Query Frame = -2 Query: 25 SEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAGASFGQFAIHE----DDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 600 S+ K+AD++L P RH A+ G+S+ ++V+F + +G GF LKL L+++LA+ IH DD + K+ + +L + VT + A+R+ G GASG VA + K ++ AAA D H + P D+ + IS +G ++L + A+ + G ++ + Sbjct: 17 SDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAI 212
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_SALAR (HTH-type transcriptional regulator murR OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=murR PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.484e-14 Identity = 53/199 (26.63%), Postives = 95/199 (47.74%), Query Frame = -2 Query: 25 SEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 600 +E K+A +L + + A + IS+ +IV+F + +G +GF +L++ L + + A +I +DS+ + K+ + L E +D L++ + +S+A ++ G G S V D K ++ A D H+QA A L+ DV I IS SG K++++ A R+ GAT+I + Sbjct: 17 NEQKIATFLLAHVGELKTVSSRNMAKQLEISQSSIVKFAQKLGANGFTELRMALIEEHSVSREKKRDKAVHLHSSITSEDSLEMMARKLNREKIVALEETYNLMDYERLEQVINLISKAPLIQITGVGGSALVGRDLSFKLMKIGFRVACEVDTHVQATIAQALRQGDVQIAISYSGSKKEIVLCAEAARKQGATVIAI 215
BLAST of EY729297 vs. ExPASy Swiss-Prot
Match: MURR_CITK8 (HTH-type transcriptional regulator murR OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=murR PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.531e-14 Identity = 52/199 (26.13%), Postives = 95/199 (47.74%), Query Frame = -2 Query: 25 SEIKVADHVLHDPAA*RHSPMADSAHSVGISEPTIVRFCRAIGCSGFQDLKLKLAQSLAAG-------ASFGQFAIHEDDSVAXYSLKIFDTTLHTLMEVREKLDPVELQKAVTAMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGATLITL 600 +E K+A +L + + + A + +S+ +IV+F + +G GF +L++ L + + A I +DS+ + K+ + L E +D L++ + +S+A+ ++ G G S V D K ++ A D H+QA A L+ DV I IS SG K++++ A R+ GAT+I + Sbjct: 17 NEQKIASFLLAHVSELKTVSSRNLAKQLEVSQSSIVKFAQKLGAKGFTELRMALIEEYSVNREKKHDTALHLHSTITSEDSLEVIARKLNREKMFALEETCSLMDFDRLKQVINLISKARLIQITGVGGSALVGRDLSFKLMKIGYRVACEVDTHVQATIAQALQEGDVQIAISYSGSKKEIVLCAEAARKQGATVIAI 215 The following BLAST results are available for this feature:
BLAST of EY729297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729297 ID=EY729297; Name=EY729297; organism=Citrus sinensis; type=EST; length=910bpback to top |