EY729292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729292 vs. ExPASy Swiss-Prot
Match: MSBA_SHIBS (Lipid A export ATP-binding/permease protein msbA OS=Shigella boydii serotype 4 (strain Sb227) GN=msbA PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 6.104e-47 Identity = 93/196 (47.45%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDA-SMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQF 585 + SL+ R YD+ +G++L+DG D+R+ T SL Q+ L+ Q LF+ ++ NI Y R + S E++ EA A A +FI+ M++G ++++GE GV LSGGQRQRIAIAR LL+++PIL++DEATS+LD+ +ER IQ LDE+ +++T LV+AHRLST+ D I+V ++G ++E G+H LL G YA+L QF Sbjct: 385 IASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQF 580
BLAST of EY729292 vs. ExPASy Swiss-Prot
Match: MSBA_ECOUT (Lipid A export ATP-binding/permease protein msbA OS=Escherichia coli (strain UTI89 / UPEC) GN=msbA PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 6.104e-47 Identity = 93/196 (47.45%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDA-SMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQF 585 + SL+ R YD+ +G++L+DG D+R+ T SL Q+ L+ Q LF+ ++ NI Y R + S E++ EA A A +FI+ M++G ++++GE GV LSGGQRQRIAIAR LL+++PIL++DEATS+LD+ +ER IQ LDE+ +++T LV+AHRLST+ D I+V ++G ++E G+H LL G YA+L QF Sbjct: 385 IASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQF 580
BLAST of EY729292 vs. ExPASy Swiss-Prot
Match: MSBA_ECOLI (Lipid A export ATP-binding/permease protein msbA OS=Escherichia coli (strain K12) GN=msbA PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 6.104e-47 Identity = 93/196 (47.45%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDA-SMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQF 585 + SL+ R YD+ +G++L+DG D+R+ T SL Q+ L+ Q LF+ ++ NI Y R + S E++ EA A A +FI+ M++G ++++GE GV LSGGQRQRIAIAR LL+++PIL++DEATS+LD+ +ER IQ LDE+ +++T LV+AHRLST+ D I+V ++G ++E G+H LL G YA+L QF Sbjct: 385 IASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQF 580
BLAST of EY729292 vs. ExPASy Swiss-Prot
Match: MSBA_ECOL6 (Lipid A export ATP-binding/permease protein msbA OS=Escherichia coli O6 GN=msbA PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 6.104e-47 Identity = 93/196 (47.45%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDA-SMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQF 585 + SL+ R YD+ +G++L+DG D+R+ T SL Q+ L+ Q LF+ ++ NI Y R + S E++ EA A A +FI+ M++G ++++GE GV LSGGQRQRIAIAR LL+++PIL++DEATS+LD+ +ER IQ LDE+ +++T LV+AHRLST+ D I+V ++G ++E G+H LL G YA+L QF Sbjct: 385 IASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQF 580
BLAST of EY729292 vs. ExPASy Swiss-Prot
Match: MSBA_ECOL5 (Lipid A export ATP-binding/permease protein msbA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=msbA PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 6.104e-47 Identity = 93/196 (47.45%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDA-SMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQF 585 + SL+ R YD+ +G++L+DG D+R+ T SL Q+ L+ Q LF+ ++ NI Y R + S E++ EA A A +FI+ M++G ++++GE GV LSGGQRQRIAIAR LL+++PIL++DEATS+LD+ +ER IQ LDE+ +++T LV+AHRLST+ D I+V ++G ++E G+H LL G YA+L QF Sbjct: 385 IASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQF 580
BLAST of EY729292 vs. ExPASy Swiss-Prot
Match: MSBA_ECO57 (Lipid A export ATP-binding/permease protein msbA OS=Escherichia coli O157:H7 GN=msbA PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 6.104e-47 Identity = 93/196 (47.45%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDA-SMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQF 585 + SL+ R YD+ +G++L+DG D+R+ T SL Q+ L+ Q LF+ ++ NI Y R + S E++ EA A A +FI+ M++G ++++GE GV LSGGQRQRIAIAR LL+++PIL++DEATS+LD+ +ER IQ LDE+ +++T LV+AHRLST+ D I+V ++G ++E G+H LL G YA+L QF Sbjct: 385 IASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQF 580
BLAST of EY729292 vs. ExPASy Swiss-Prot
Match: AB21B_ARATH (ABC transporter B family member 21 OS=Arabidopsis thaliana GN=ABCB21 PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 6.104e-47 Identity = 98/210 (46.67%), Postives = 147/210 (70.00%), Query Frame = 1 Query: 1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDASMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQ-GGQYARLW-----SRQFSDALDEVAL 612 ++SL+ R YD Q G+V +DG ++++ + +IGL+ QEP LF SI+ENI YG+ +A++EE+ +A A AS+FID + G +++VGE G +LSGGQ+QRIA+AR +LK+ IL++DEATS+LD+ +ER +Q+ LD IM ++T +VVAHRLSTV + D I V G+++E GSH +LLR G Y++L ++Q D+ DE L Sbjct: 447 VVSLIERFYDPQSGEVRIDGINLKEFQLKWIRSKIGLVSQEPVLFTSSIKENIAYGKENATVEEIRKATELANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGSHSELLRDPEGAYSQLIRLQEDTKQTEDSTDEQKL 656 HSP 2 Score: 177.948 bits (450), Expect = 6.317e-44 Identity = 90/192 (46.88%), Postives = 134/192 (69.79%), Query Frame = 1 Query: 1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRL-DASMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLR-QGGQYARL 570 +++LL R YD GQ+ +DG +++ + L QQ GL+ QEP LF+ +IR NI YG+ DA+ E+ A + A FI ++ GY+++VGERGV+LSGGQ+QR+AIAR ++K+ +L++DEATS+LD+ +ER +QD LD +M ++T +VVAHRLST+ + D I V NG ++E G HE L+ + G YA L Sbjct: 1092 VIALLQRFYDPDSGQITLDGVEIKTLQLKWLRQQTGLVSQEPVLFNETIRANIAYGKGGDATETEIVSAAELSNAHGFISGLQQGYDTMVGERGVQLSGGQKQRVAIARAIVKDPKVLLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHETLINIKDGVYASL 1283
BLAST of EY729292 vs. ExPASy Swiss-Prot
Match: NDVA_RHOP5 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain BisA53) GN=ndvA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.972e-47 Identity = 97/194 (50.00%), Postives = 136/194 (70.10%), Query Frame = 1 Query: 4 LSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDASMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQF 585 ++LL R +D Q G + +DG DVR +T L + IG++ QE LF R+I +N+ G+ DA+ EE+ A RA A +FI+ E +++ GERG LSGG+RQR++IAR LLK+ PIL++DEATS+LD++TE + LDE+M+ +T V+AHRLST+ H RILVFDNGRVIE GS ++LL + G +A L QF Sbjct: 388 IALLHRAFDPQSGVIKIDGMDVRGLTLAGLRRNIGVVFQEALLFDRTIADNLRVGKPDATEEEMRIAASRAQALDFIERSELKFDTNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNLALDEVMKGRTTFVIAHRLSTIRHATRILVFDNGRVIESGSFDELLARRGYFAELAHAQF 581
BLAST of EY729292 vs. ExPASy Swiss-Prot
Match: MSBA_SHISS (Lipid A export ATP-binding/permease protein msbA OS=Shigella sonnei (strain Ss046) GN=msbA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.972e-47 Identity = 93/196 (47.45%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDA-SMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQF 585 + SL+ R YD+ +G++L+DG D+R+ T SL Q+ L+ Q LF+ ++ NI Y R + S E++ EA A A +FI+ M++G ++++GE GV LSGGQRQRIAIAR LL+++PIL++DEATS+LD+ +ER IQ LDE+ +++T LV+AHRLST+ D I+V ++G ++E G+H LL G YA+L QF Sbjct: 385 IASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAIDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQF 580
BLAST of EY729292 vs. ExPASy Swiss-Prot
Match: MSBA_ALCBS (Lipid A export ATP-binding/permease protein msbA OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=msbA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.972e-47 Identity = 93/196 (47.45%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 7 SLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDASME-EVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQFSD 591 ++L R +D QG++L+DG +++ L QI ++ Q LF+ S+R NI YG L +S + + +A A A FI+ +EHG ++L+G+ GV+LSGGQRQRIAIAR LLK+AP+L++DEATS+LDS +E IQ L+++M+ +T LV+AHRLST+ DRI+V D G++IE GSH+QLL + G Y +++ FS+ Sbjct: 386 AMLPRFFDPDQGRILLDGIPLQEYQLSELRNQIAMVSQRVVLFNDSVRNNIAYGELRSSDDASIIKAAKDAHAWSFIEQLEHGLDTLLGQDGVQLSGGQRQRIAIARALLKDAPVLILDEATSALDSESEHHIQQALEQVMQGRTTLVIAHRLSTIEKADRIMVLDQGQLIEQGSHQQLLEKNGLYTQMYRMNFSE 581 The following BLAST results are available for this feature:
BLAST of EY729292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY729292 ID=EY729292; Name=EY729292; organism=Citrus sinensis; type=EST; length=869bpback to top |