EY729290
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY729290 vs. ExPASy Swiss-Prot
Match: RS3A_TORRU (40S ribosomal protein S3a OS=Tortula ruralis GN=RPS3A PE=2 SV=3) HSP 1 Score: 66.6254 bits (161), Expect = 5.447e-13 Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 1 Query: 592 QIASEGSQHRVFEVSLXDLSHEEEHAYRKIRLXXEDVQGKNVLTTFW 732 +IAS+G RVFEVSL DL ++E+ A+RKI+L EDVQGKNVLT FW Sbjct: 54 KIASDGLNFRVFEVSLADLQNDEDQAFRKIKLRAEDVQGKNVLTNFW 100 HSP 2 Score: 28.8758 bits (63), Expect = 5.447e-13 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 816 LLNYLGHEFTTDKLRSWVR 872 L N+ G +FTTDKLRS VR Sbjct: 96 LTNFWGMDFTTDKLRSLVR 114
BLAST of EY729290 vs. ExPASy Swiss-Prot
Match: RS3A1_ARATH (40S ribosomal protein S3a-1 OS=Arabidopsis thaliana GN=RPS3AA PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 7.062e-13 Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 1 Query: 592 QIASEGSQHRVFEVSLXDLSHEEEHAYRKIRLXXEDVQGKNVLTTFW 732 +IASEG +HRVFEVSL DL +E++AYRKIRL EDVQG+NVL FW Sbjct: 55 KIASEGLKHRVFEVSLADLQGDEDNAYRKIRLRAEDVQGRNVLCQFW 101 HSP 2 Score: 25.409 bits (54), Expect = 7.062e-13 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 816 LLNYLGHEFTTDKLRSWVR 872 L + G +FTTDKLRS V+ Sbjct: 97 LCQFWGMDFTTDKLRSLVK 115
BLAST of EY729290 vs. ExPASy Swiss-Prot
Match: RS3A_CHLRE (40S ribosomal protein S3a OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_168484 PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 3.556e-11 Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 592 QIASEGSQHRVFEVSLXDLSHEEEHAYRKIRLXXEDVQGKNVLTTFW 732 +IASE + RVFEVSL DL E+ A+RK+RL EDVQG+N LT FW Sbjct: 55 KIASEALKGRVFEVSLADLQKNEDDAFRKMRLRVEDVQGRNCLTNFW 101 HSP 2 Score: 28.8758 bits (63), Expect = 3.556e-11 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 816 LLNYLGHEFTTDKLRSWVR 872 L N+ G +FTTDKLRS VR Sbjct: 97 LTNFWGMDFTTDKLRSLVR 115
BLAST of EY729290 vs. ExPASy Swiss-Prot
Match: RS3A_OSTLU (40S ribosomal protein S3a OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_28528 PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 5.989e-11 Identity = 26/46 (56.52%), Postives = 39/46 (84.78%), Query Frame = 1 Query: 592 QIASEGSQHRVFEVSLXDLSHEEEHAYRKIRLXXEDVQGKNVLTTF 729 +IAS+G + R+FE+SL DL+++E+ ++RK++L EDVQGKNVLT F Sbjct: 55 KIASDGLKGRIFEISLADLNNDEDQSFRKMKLKCEDVQGKNVLTNF 100 HSP 2 Score: 28.8758 bits (63), Expect = 5.989e-11 Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 816 LLNYLGHEFTTDKLRSWVRNGY 881 L N+ G +FTTDK+RS VR + Sbjct: 97 LTNFAGMDFTTDKIRSLVRKWF 118 The following BLAST results are available for this feature:
BLAST of EY729290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729290 ID=EY729290; Name=EY729290; organism=Citrus sinensis; type=EST; length=894bpback to top |