EY729288

Overview
NameEY729288
Unique NameEY729288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729288 vs. ExPASy Swiss-Prot
Match: GPMI2_METAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans GN=gpmI2 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.579e-23
Identity = 60/153 (39.22%), Postives = 91/153 (59.48%), Query Frame = 1
Query:  139 VVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSXLDQLQLLLKGASERGAKRIRLHMLTDGRDV 585
            +++LDGWG  +  + N I  A+TP ++S     P  W  L   G AVGLP E  MGNSEVGH  +GAGR+  Q    ++L++ +G  +++    +  + +K      +LHL+GL+S GGVHS +  L  L+K A ++G K++ +H   DGRDV
Sbjct:   16 LMILDGWGYREASEGNAILAAETPNLNSLLNEFP--WCFLECSGEAVGLP-EGQMGNSEVGHLNIGAGRVVYQDLTRINLSVRNGDFFENPVLLDAISNVK--LNDSSLHLMGLVSYGGVHSYMTHLYALIKLARDKGLKKVYIHAFLDGRDV 163          
BLAST of EY729288 vs. ExPASy Swiss-Prot
Match: GPMI_SULDN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.368e-23
Identity = 63/165 (38.18%), Postives = 94/165 (56.97%), Query Frame = 1
Query:  139 VVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSXLDQLQLLLKGASERGAKRIRLHMLTDGRDVLDGSXVGFVKTIEKDL 633
            +V+ DG G     +YN  + A  PT D    + P  +  +  HG +VGLP E  MGNSEVGH ++G+GR+  Q    + L+L+  +   +E F  +    ++  LHLIGL+SDGGVHS +D    +   A++ G K + LH++TDGRDV   S   ++  +EK L
Sbjct:    7 LVITDGIGYSSGMEYNAFYNAQKPTYDKLFSNTPHSF--IETHGLSVGLP-EGQMGNSEVGHMSMGSGRVLYQDLVKISLSLSENRFRDNEAFRELLA--KSSRLHLIGLMSDGGVHSHIDHFMGIADIAAKEG-KEVFLHLITDGRDVSPTSAKKYLAQVEKHL 165          
BLAST of EY729288 vs. ExPASy Swiss-Prot
Match: GPMI_ACHLI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Acholeplasma laidlawii (strain PG-8A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.840e-23
Identity = 63/170 (37.06%), Postives = 89/170 (52.35%), Query Frame = 1
Query:  121 RNNIVAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSXLDQLQLLLKGASERG-AKRIRLHMLTDGRDVLDGSXVGFVKTI 621
            +    A++++DG G       N + +ADT  +D+  K  P     L   G AVGLP E  MGNSEVGH  LGAGRI  Q    +++A+  G  ++++ F             LH++GL+SDGGVH+ +     L   A ++    R  LH+ TDGRD    S  GFVKT+
Sbjct:    2 KEKFAALIIMDGLGIAPASDSNSVTLADTTYLDNLLKEYPNS--TLVTSGEAVGLP-EGQMGNSEVGHLNLGAGRIVWQSLSRINVAIKDGSFFKNQAFLDAVAHAKKHNSKLHIMGLVSDGGVHAQMGHYLALYDFAKQQNILDRTYLHVFTDGRDTPQESGYGFVKTL 168          

HSP 2 Score: 27.335 bits (59), Expect = 3.840e-23
Identity = 13/28 (46.43%), Postives = 17/28 (60.71%), Query Frame = 2
Query:  692 FLPMDRYENDWDVGNQGWDAPLLGERPH 775
            F  MDR +N+WD     +DA  LG+ PH
Sbjct:  182 FYAMDR-DNNWDRVQLAFDAMTLGDGPH 208          
BLAST of EY729288 vs. ExPASy Swiss-Prot
Match: GPMI_SACD2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23
Identity = 65/172 (37.79%), Postives = 95/172 (55.23%), Query Frame = 1
Query:  133 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSXLDQLQLLLKGASERGAKRIRLHMLTDGRDVLDGSXVGFVKTIEKDLAEL 642
            +A+++LDG+G  + DKYN I+ A  PT        P     +   G AVGLP E  MGNSEVGH  LGAGR+  Q    ++ A+A G  Y +  +       ++    +H+IGLLSDGGVHS  D +  +++ A +RGA+++ +H   DGRD    S    ++  E+ L  L
Sbjct:    8 LALIILDGFGYSESDKYNAINAAKAPTWRKIWAENPKT--TIATSGMAVGLP-EGQMGNSEVGHMTLGAGRVVYQNFTRINKAIADGDFYTNPVYTKAVDDAQSQGKAVHVIGLLSDGGVHSHEDHMIAMMELAVKRGAEKVYMHAFLDGRDTPPRSAKAPLQKTEEKLKAL 176          
BLAST of EY729288 vs. ExPASy Swiss-Prot
Match: GPMI_PSEA6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23
Identity = 68/172 (39.53%), Postives = 93/172 (54.07%), Query Frame = 1
Query:  133 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSXLDQLQLLLKGASERGAKRIRLHMLTDGRDVLDGSXVGFVKTIEKDLAEL 642
            VA++++DGWG  +    N I  A TP +D   K       L+ A G  VGLP    MGNSEVGH  LGAGR+  Q    V  A+  G  +++E    N  K   +   +H++GLLS GGVHS  D +  ++K A++RGAK+I LH   DGRD    S    ++  +K   EL
Sbjct:    8 VALIIMDGWGHREDTTNNAIAHAKTPVLDRLTKETTNT--LISASGMDVGLPG-GQMGNSEVGHVNLGAGRVVYQDFTRVTKAIEDGDFFENEVLVSNVDKAIKQDKAVHIMGLLSPGGVHSHQDHIFAMIKLAAKRGAKKIFLHAFLDGRDTPPRSAKAPLEAADKVFEEL 176          
BLAST of EY729288 vs. ExPASy Swiss-Prot
Match: GPMI_PORYE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Porphyra yezoensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23
Identity = 64/170 (37.65%), Postives = 90/170 (52.94%), Query Frame = 1
Query:  133 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIK-------PSFETGTLHLIGLLSDGGVHSXLDQLQLLLKGASERGAKRIRLHMLTDGRDVLDGSXVGFVKTI 621
            + + +LDGWG     + N I +A TPT+DS  ++ P    LL A G  VGLP +  MGNSEVGH  +G GR+  Q     +L      I  +  FN ++        +    +LHLIGL S+GGVHS +D L  L+  A  +    + LH++TDGRD    S   F+K +
Sbjct:    9 IVLAILDGWGHTNIQQGNAIKIAKTPTIDSLIQAYPST--LLAASGQEVGLP-KGQMGNSEVGHTTIGGGRVIQQ-----ELVKIGNSIVDNSFFNNLELNEACEYANNNKASLHLIGLCSNGGVHSHIDHLLALIDLADSKQVTNLYLHLITDGRDTSSNSAKYFIKIV 170          
BLAST of EY729288 vs. ExPASy Swiss-Prot
Match: GPMI_CYAP4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23
Identity = 71/172 (41.28%), Postives = 92/172 (53.49%), Query Frame = 1
Query:  133 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSF-ETGT-LHLIGLLSDGGVHSXLDQLQLLLKGASERGAKRIRLHMLTDGRDVLDGSXVGFVKTIEKDLAEL 642
            V +V+LDGWG  +    N I  A TP MDS  ++ P    L+   G AVGLP +  MGNSEVGH  LGAGRI  Q    +  A   G +  +     +     + GT LHL+GL SDGGVHS LD L  LL  A   G  ++ +H +TDGRD L      F++ ++  L  L
Sbjct:    9 VVLVILDGWGYREELVGNAIAAAHTPVMDSLWQAYPHT--LVYTSGKAVGLP-KGQMGNSEVGHLNLGAGRIVPQELVRISDAAEDGSLAANPALVQVYEGVKQRGTKLHLVGLCSDGGVHSHLDHLLALLDMAKSLGVTQVCVHAITDGRDTLPTEGKTFIQRLQDHLDRL 177          
BLAST of EY729288 vs. ExPASy Swiss-Prot
Match: GPMI_CLOBL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23
Identity = 65/172 (37.79%), Postives = 96/172 (55.81%), Query Frame = 1
Query:  133 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE--TGTLHLIGLLSDGGVHSXLDQLQLLLKGASERGAKRIRLHMLTDGRDVLDGSXVGFVKTIEKDLAEL 642
            V +++LDG+G       N +  A+ P +D+  K  P     L A G  VGLP E  MGNSEVGH  +GAGRI  Q    +  +++ G  +++   N    + +    TLHL+GLLS GGVHS +D L+ L+K A E+  K++ +H   DGRDV   S   +++ IE  + E+
Sbjct:    6 VVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQ--LGASGMDVGLP-EGQMGNSEVGHLNIGAGRIVYQALTKITKSISDGDFFENVALNKAIENAKKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAKEYIEDIEIYMQEI 174          
BLAST of EY729288 vs. ExPASy Swiss-Prot
Match: GPMI_CLOB8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23
Identity = 67/172 (38.95%), Postives = 100/172 (58.14%), Query Frame = 1
Query:  133 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE-TGT-LHLIGLLSDGGVHSXLDQLQLLLKGASERGAKRIRLHMLTDGRDVLDGSXVGFVKTIEKDLAEL 642
            V +++LDG+G     + N + +A  P +D   +  P     L+A G AVGLP E  MGNSEVGH  +G+GRI  Q    +  A+A G  +++E       + + TG+ LHL+GLLSDGGVHS ++ L+ LL+ A +   + + +H   DGRDV   S   F++  EK +AE+
Sbjct:    6 VMLMILDGFGIAPKSEGNAVTLAKKPNLDKLFEKYPTSQ--LQASGLAVGLP-EGQMGNSEVGHLNIGSGRIVYQELTRITKAIADGDFFENESLKLAMTNAKKTGSSLHLMGLLSDGGVHSHIEHLRGLLEFAKKEEVQNVYVHAFMDGRDVPPSSGQEFIEKTEKMMAEV 174          
BLAST of EY729288 vs. ExPASy Swiss-Prot
Match: GPMI_CHRSD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gpmI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23
Identity = 69/172 (40.12%), Postives = 94/172 (54.65%), Query Frame = 1
Query:  133 VAVVVLDGWGEFKPDKYNCIHVADTPTMDSFKKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSXLDQLQLLLKGASERGAKRIRLHMLTDGRDVLDGSXVGFVKTIEKDLAEL 642
            VA+++LDG+G+    +YN ++ A TP MD+ K+  P    LL   G  VGLP +  MGNSEVGH  LGAGRI  Q    +  A+   ++  +      I  +   G  +HL+GLLS GGVHS  D +  +   A+ERGAK + LH   DGRD    S    ++     LAEL
Sbjct:   12 VALLILDGYGQNDDTEYNAVYSARTPVMDALKQRYPST--LLHTDGKYVGLP-DGQMGNSEVGHMNLGAGRIVYQDFTRITKAIEDNELASNPVLTAPIDAAVAAGRAVHLLGLLSPGGVHSHEDHILAVAALAAERGAKHVYLHAFLDGRDTAPKSARASLERANARLAEL 180          
The following BLAST results are available for this feature:
BLAST of EY729288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GPMI2_METAC2.579e-2339.222,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SULDN3.368e-2338.182,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ACHLI3.840e-2337.062,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SACD24.399e-2337.792,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEA64.399e-2339.532,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PORYE4.399e-2337.652,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CYAP44.399e-2341.282,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOBL4.399e-2337.792,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOB84.399e-2338.952,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHRSD4.399e-2340.122,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-015-A03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729288 ID=EY729288; Name=EY729288; organism=Citrus sinensis; type=EST; length=830bp
CACGCGTCCGCTCTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCG
CCTTCAATCCAAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAA
AAGAGCATCCACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGTTG
GATGGCTGGGGCGAGTTCAAGCCCGACAAGTATAACTGCATCCATGTCGC
CGACACTCCCACCATGGACTCTTTCAAGAAGTCTGCCCCTGGGAGGTGGA
GGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTCCAACTGAAGATGAC
ATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTT
TGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCT
ATCAAGATGAGGGATTTAATTACATTAAGCCATCTTTTGAAACCGGCACA
TTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTACACTCTANGCTTGA
TCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAA
TTCGTCTTCATATGCTTACTGACGGGCGTGATGTTTTGGATGGTTCAANC
GTAGGATTCGTAAAAACTATTGAGAAAGATCTTGCAGAATTGCGTTGGGA
AAGGTGTTGACCCGCAGATTGCATCTGGAGGGAGGCGGATGTTCCTCCCC
ATGGACCGTTATGAGAATGATTGGGATGTTGGCAACCAAGGATGGGATGC
CCCCCTCTTGGGAGAGCGTCCCCACGGTTTACAGCCCCGTTGAGACGTGC
AAGAAGCGAGGGAGCACCCAGATGCAGTGA
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