EY729175

Overview
NameEY729175
Unique NameEY729175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729175 vs. ExPASy Swiss-Prot
Match: TRPD_VIBCH (Anthranilate phosphoribosyltransferase OS=Vibrio cholerae GN=trpD PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.193e-31
Identity = 73/193 (37.82%), Postives = 113/193 (58.55%), Query Frame = 3
Query:  213 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGXRRCVDXAXIGFMMSTKYHPAMKFVRPVXEKLKVKTVFHILGPMLNPACVPFAVVGVTMK 785
            +I+ L  +  LT+AE+Q   D ++  E D  L++A L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG+NT+NIST A+ +AAACG KVAK             D+L + G+ + +  +  R+ +D   + F+ + +YH  ++   PV + +K +T+F+ILGP++NPA     ++GV  K
Sbjct:    4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLSSFGINLAMSAQDSRQALDDLGVAFLFAPQYHGGVRHAMPVRQTMKTRTIFNILGPLINPARPNIELMGVYSK 196          

HSP 2 Score: 23.8682 bits (50), Expect = 1.193e-31
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  817 RFGLKRALVVHQXVLDEM 870
            + GLKRA VVH   LDE+
Sbjct:  208 QMGLKRAAVVHGSGLDEV 225          
BLAST of EY729175 vs. ExPASy Swiss-Prot
Match: TRPD_VIBC3 (Anthranilate phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.193e-31
Identity = 73/193 (37.82%), Postives = 113/193 (58.55%), Query Frame = 3
Query:  213 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGXRRCVDXAXIGFMMSTKYHPAMKFVRPVXEKLKVKTVFHILGPMLNPACVPFAVVGVTMK 785
            +I+ L  +  LT+AE+Q   D ++  E D  L++A L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG+NT+NIST A+ +AAACG KVAK             D+L + G+ + +  +  R+ +D   + F+ + +YH  ++   PV + +K +T+F+ILGP++NPA     ++GV  K
Sbjct:    4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLSSFGINLAMSAQDSRQALDDLGVAFLFAPQYHGGVRHAMPVRQTMKTRTIFNILGPLINPARPNIELMGVYSK 196          

HSP 2 Score: 23.8682 bits (50), Expect = 1.193e-31
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  817 RFGLKRALVVHQXVLDEM 870
            + GLKRA VVH   LDE+
Sbjct:  208 QMGLKRAAVVHGSGLDEV 225          
BLAST of EY729175 vs. ExPASy Swiss-Prot
Match: TRPD_RALEJ (Anthranilate phosphoribosyltransferase OS=Ralstonia eutropha (strain JMP134) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.293e-31
Identity = 76/160 (47.50%), Postives = 101/160 (63.12%), Query Frame = 3
Query:  303 LISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGXRRCVDXAXIGFMMSTKYHPAMKFVRPVXEKLKVKTVFHILGPMLNPACVPFAVVGV 776
            + +A L  LR K ET GEI   A+ M ++A KVE     + VDIVGTGGDG++T NIST +  +AAA GAK+AK             DVLEALGV I L PE   +C+    IGFM +  +HPAMK V P+ +++ V+T+F+ILGP+ NPA  P  ++GV
Sbjct:   66 MAAAILTGLRVKKETIGEISAAAQVMREFANKVEVTDRENFVDIVGTGGDGSHTFNISTASMFVAAAAGAKIAKHGNRGVSSKSGSADVLEALGVNIMLTPEQVGQCIAQTGIGFMFAPTHHPAMKNVAPIRKEMGVRTIFNILGPLTNPADAPNILMGV 225          
BLAST of EY729175 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPC (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Corby) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.293e-31
Identity = 76/215 (35.35%), Postives = 117/215 (54.42%), Query Frame = 3
Query:  213 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGXRRCVDXAXIGFMMSTKYHPAMKFVRPVXEKLKVKTVFHILGPMLNPACVPFAVVGVTMKTWYSKWQCT-ATIWAEKSIGCSS 851
            L + L+SR DL+  + Q  +   +  E  +  I+ FL L+R K ET  E+   A+ M + A K++     +DIVGTGGDG NT N+ST  S + AA G KVAK             D+LE  G +++L     + C++   + F+ +  YHPAM+  R   ++L ++T+F++LGP++NPA V   VVGV    W        A + +E+S+  SS
Sbjct:    6 LFEQLLSRQDLSSDQMQEVIHACMTGEFSDVQIATFLALMRMKSETVNELTAAAKVMRQLAHKIDLGNPLIDIVGTGGDGRNTFNVSTACSFVVAAAGIKVAKHGNRSVSSRSGSADLLEQAGFILNLSDSQVQNCINQCQLAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGPLINPAQVKRQVVGVFSTNWLKTIATVLANLGSERSLVISS 220          
BLAST of EY729175 vs. ExPASy Swiss-Prot
Match: TRPD_CARHZ (Anthranilate phosphoribosyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.293e-31
Identity = 85/194 (43.81%), Postives = 115/194 (59.28%), Query Frame = 3
Query:  210 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYA----TKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGXRRCVDXAXIGFMMSTKYHPAMKFVRPVXEKLKVKTVFHILGPMLNPACVPFAVVGV 776
            E+++ L+   +L  +EA A+++ L+  +  EA ++AFLV L+ KGET  EI   A A+ + A    T+ EGL   VD  GTGGDG  T NIST A+ + A  G  VAK             DVLEALGV IDLD +G  RCVD   IGF+ +   HPAM+ V     ++ V+TVF+ILGP+ NPA +   V+GV
Sbjct:    4 EVLERLMRGENLNFSEALATMNELMEGKYTEAQVAAFLVALKMKGETEEEISAFALALREKARRVITQTEGL---VDTCGTGGDGRQTFNISTAAAFVVAGAGIPVAKHGNRSVSSRSGSADVLEALGVNIDLDAKGTARCVDEIGIGFLFAPNLHPAMRHVAKTRREIGVRTVFNILGPLANPANIVGQVLGV 194          
BLAST of EY729175 vs. ExPASy Swiss-Prot
Match: TRPD_HALMA (Anthranilate phosphoribosyltransferase OS=Haloarcula marismortui GN=trpD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.554e-31
Identity = 81/193 (41.97%), Postives = 109/193 (56.48%), Query Frame = 3
Query:  210 ELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV----EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGXRRCVDXAXIGFMMSTKYHPAMKFVRPVXEKLKVKTVFHILGPMLNPACVPFAVVGV 776
            E I+ +    DLT+AEA+A    +  +A EA I A L  LRAKGET  EI G A  M   A  +    EGL   VD  GTGGD  NT+N+ST ++I+AA  G  +AK             DVLE +GV I+ +P      ++   IGFM++  +HPAMK V    ++L ++TVF+ILGP+ NPA     V+GV
Sbjct:    3 EYIERVTDGDDLTQAEARAVATTVFEDATEAQIGALLTALRAKGETEAEIAGFAEGMRDAARTIRPDREGL---VDTCGTGGDDYNTINVSTTSAIVAAGAGVPIAKHGNYSVSSSSGSADVLEEVGVDIEAEPPDVEETIERDGIGFMLAPVFHPAMKAVIGPRQELGMRTVFNILGPLTNPADADAQVLGV 192          

HSP 2 Score: 24.6386 bits (52), Expect = 1.554e-31
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  808 ALQRFGLKRALVVHQXVLDEM 870
            AL R  ++RALVVH   LDE+
Sbjct:  204 ALARLDVERALVVHGDGLDEI 224          
BLAST of EY729175 vs. ExPASy Swiss-Prot
Match: TRPD_RHOOB (Anthranilate phosphoribosyltransferase OS=Rhodococcus opacus (strain B4) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.688e-31
Identity = 78/179 (43.58%), Postives = 111/179 (62.01%), Query Frame = 3
Query:  240 DLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGXRRCVDXAXIGFMMSTKYHPAMKFVRPVXEKLKVKTVFHILGPMLNPACVPFAVVG 773
            DL   +A+ ++D ++++ A  A I+AF V L+ KGET  E+ GLA +M+ +A KV    D VDIVGTGGD +NTVNIST AS++ AA G +V K             DVLEALGV I+L P+   RCV    IGF  +  +HPA++F     +++ + TVF++LGP+ NPA     ++G
Sbjct:   31 DLAVDDAKWAMDEIMSDNATSAQIAAFGVALKMKGETPEELRGLADSMLGHARKVPVDDDVVDIVGTGGDRSNTVNISTMASLVVAASGIRVVKHGNRAASSKSGGADVLEALGVKINLGPDEVARCVREVGIGFCFAPVFHPALRFAGAPRKEIGIPTVFNVLGPLTNPARPRAGLIG 209          
BLAST of EY729175 vs. ExPASy Swiss-Prot
Match: TRPD_PSYWF (Anthranilate phosphoribosyltransferase OS=Psychrobacter sp. (strain PRwf-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.688e-31
Identity = 74/187 (39.57%), Postives = 110/187 (58.82%), Query Frame = 3
Query:  225 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGXRRCVDXAXIGFMMSTKYHPAMKFVRPVXEKLKVKTVFHILGPMLNPACVPFAVVGV 776
            ++ R+DLT+ E +  +  +++    +A++ A L  L  K E+  EI   A  M+ +A K+E     + VDIVGTGGDG+N  N+ST ++ +AAA GA VAK             D+LE  G+ +++ PE  R C++   IGF+ +  +H AMK   PV   LKV+T+F+ILGP+ NPA V   VVGV
Sbjct:   27 ILRRIDLTQQEMRQIMTIIMDGRCPDAMLGALLTGLNMKSESIDEITASASVMLDFAKKIEPKNRTNMVDIVGTGGDGSNLFNVSTASAFVAAAAGATVAKHGNRGVSSKSGSSDLLEQAGLNLNITPEQTRECIETQGIGFLFAPNHHTAMKHAIPVRRALKVRTIFNILGPLTNPAGVKNLVVGV 213          
BLAST of EY729175 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPK (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain KT2440) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31
Identity = 78/191 (40.84%), Postives = 109/191 (57.07%), Query Frame = 3
Query:  225 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGXRRCVDXAXIGFMMSTKYHPAMKFVRPVXEKLKVKTVFHILGPMLNPACVPFAVVGVTMKT 788
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P    RC+D   IGFM +  +H AMK       +L ++T+F++LGP+ NPA V   VVGV  +T
Sbjct:   10 IVGQLDLTTEEMREVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELAEKVELQSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCPVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMKHAAGPRRELGLRTLFNMLGPLTNPAGVKHQVVGVFAQT 200          

HSP 2 Score: 21.1718 bits (43), Expect = 2.022e-31
Identity = 9/13 (69.23%), Postives = 9/13 (69.23%), Query Frame = 1
Query:  811 LQRFGLKRALVVH 849
            LQR G K  LVVH
Sbjct:  209 LQRLGSKHVLVVH 221          
BLAST of EY729175 vs. ExPASy Swiss-Prot
Match: TRPD_PSEP1 (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31
Identity = 78/191 (40.84%), Postives = 109/191 (57.07%), Query Frame = 3
Query:  225 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGXRRCVDXAXIGFMMSTKYHPAMKFVRPVXEKLKVKTVFHILGPMLNPACVPFAVVGVTMKT 788
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P    RC+D   IGFM +  +H AMK       +L ++T+F++LGP+ NPA V   VVGV  +T
Sbjct:   10 IVGQLDLTTEEMREVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELAEKVELQSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCPVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMKHAAGPRRELGLRTLFNMLGPLTNPAGVKHQVVGVFAQT 200          

HSP 2 Score: 21.1718 bits (43), Expect = 2.022e-31
Identity = 9/13 (69.23%), Postives = 9/13 (69.23%), Query Frame = 1
Query:  811 LQRFGLKRALVVH 849
            LQR G K  LVVH
Sbjct:  209 LQRLGSKHVLVVH 221          
The following BLAST results are available for this feature:
BLAST of EY729175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_VIBCH1.193e-3137.82Anthranilate phosphoribosyltransferase OS=Vibrio c... [more]
TRPD_VIBC31.193e-3137.82Anthranilate phosphoribosyltransferase OS=Vibrio c... [more]
TRPD_RALEJ1.293e-3147.50Anthranilate phosphoribosyltransferase OS=Ralstoni... [more]
TRPD_LEGPC1.293e-3135.35Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_CARHZ1.293e-3143.81Anthranilate phosphoribosyltransferase OS=Carboxyd... [more]
TRPD_HALMA1.554e-3141.97Anthranilate phosphoribosyltransferase OS=Haloarcu... [more]
TRPD_RHOOB1.688e-3143.58Anthranilate phosphoribosyltransferase OS=Rhodococ... [more]
TRPD_PSYWF1.688e-3139.57Anthranilate phosphoribosyltransferase OS=Psychrob... [more]
TRPD_PSEPK2.022e-3140.84Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEP12.022e-3140.84Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-013-E03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729175 ID=EY729175; Name=EY729175; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGGCGTTGTTGAATTTAACTGCAGTTTCTTCCTCTCCATTT
AATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTTCGAAACTG
TGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATTAACTGCTA
TTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTCTAACGCCC
TGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGATTTAACGGA
GGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGCTGATGAGG
CCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAGAAACATTT
GGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCTACGAAGGT
GGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGGTGATGGTG
CAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTGCAGCTTGT
GGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGG
AAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAG
AGGGTGNTAGAAGGTGTGTGGATGANGCANGAATTGGTTTCATGATGTCG
ACAAAGTATCACCCTGCAATGAAGTTTGTCAGGCCAGTGANGGAAAAGCT
CAAAGTAAAAACTGTATTCCATATATTGGGTCCTATGTTGAATCCTGCAT
GTGTGCCATTCGCTGTGGTTGGTGTTACAATGAAAACTTGGTACTCAAAA
TGGCAATGCACTGCAACGATTTGGGCTGAAAAGAGCATTGGTTGTTCATC
AAANGGTTTTGGATGAAATGATCCCCTTGGACCTGTCCGATCC
back to top