EY729163

Overview
NameEY729163
Unique NameEY729163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_HALMA (Putative thiazole biosynthetic enzyme OS=Haloarcula marismortui GN=rrnAC1782 PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.934e-14
Identity = 50/169 (29.59%), Postives = 88/169 (52.07%), Query Frame = 1
Query:  283 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDY----DEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCLDPM 774
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A EL++   +Q+ ++E++   GGG WLGG L + + VR PA   LDEL +D+    D +  YV +   A    + + K        + N     D++++   RVGG+V NW  V       +C+DP+
Sbjct:    9 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELAER-GVQVMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQQVLDELEVDHKRSKDSEGLYVANGPEA---CSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPI 173          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_HALSA (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarium GN=VNG_2604G PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.832e-14
Identity = 51/166 (30.72%), Postives = 83/166 (50.00%), Query Frame = 1
Query:  286 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGI--DYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCLDPM 774
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WLGG L + + VR PA   LD+LG+  +YDE+   +    A    S +++         + N     D++V+    V G V NW  V       +C+DP+
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADAPHACSAMITAACD-AGARIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDPI 169          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_HALS3 (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE4651F PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.832e-14
Identity = 51/166 (30.72%), Postives = 83/166 (50.00%), Query Frame = 1
Query:  286 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGI--DYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCLDPM 774
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WLGG L + + VR PA   LD+LG+  +YDE+   +    A    S +++         + N     D++V+    V G V NW  V       +C+DP+
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADAPHACSAMITAACD-AGARIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDPI 169          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_DESOH (Putative thiazole biosynthetic enzyme OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=Dole_2426 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.832e-14
Identity = 47/151 (31.13%), Postives = 80/151 (52.98%), Query Frame = 1
Query:  295 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYD--EQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVKGGRVGGVVTNWALVSM 741
            + E  +SR +  R+   +I   + D    G G +GL  A+ L++    ++A+ E+ +  GGG W G  LF+ +VV+K A   LD + I Y    +++Y  D   A+ T T  +    +  V +FN V  ED++++  R+ G+V NW+ V M
Sbjct:    3 LNEVTISRAIIDRFYEKLIANLEVDVAVVGGGPSGLVAAWRLARAGR-KVALFERKLSIGGGMWGGAMLFNEIVVQKSALHVLDAMEIGYRLYAEDYYTADAVEAISTLTSQA---AKAGVAIFNCVTVEDVMIRPDRIVGLVLNWSPVEM 149          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_NATPD (Putative thiazole biosynthetic enzyme OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=NP5174A PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13
Identity = 49/169 (28.99%), Postives = 87/169 (51.48%), Query Frame = 1
Query:  283 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDY----DEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCLDPM 774
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A ELS+   +Q  ++E++   GGG WLGG L + + VR PA   L++L +D+    D +  YV +   A    + + K        + N     D++++   RVGG+V NW  V       +C+DP+
Sbjct:    6 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELSER-GVQTMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQNVLEDLDVDFKRSQDSEGLYVANGPEA---CSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPI 170          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13
Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = 1
Query:  295 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQE--HYVXDQHAALFTSTIMSKLL---PRPNVXLFNAVAAEDLIVK-GGRVGGVVTNWALVS 738
            + E I++R +   Y    + Y D D    G G A L  A  L++   +++A+ EQ +  GGG W GG +F  +VV++ A   LD+ GI Y E E  +YV +   +      + KL+         +FN V+ ED++++   RV G+V NW  V+
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTDIDVALVGGGPANLVAAKYLAE-AGVKVALYEQKLSLGGGMWAGGMMFPRIVVQEEATRILDDFGIRYKEYESGYYVANSVES------VGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVT 149          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_FERNB (Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 42/144 (29.17%), Postives = 73/144 (50.69%), Query Frame = 1
Query:  295 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVKGGRVGGVVTNW 726
            +K+  +S+ + + Y   +    + D    G G + L+ A EL+KN   ++AI E    PGGG W GG +F+ +V+      +L E  I Y +++ ++     A+  ++ M     +    +FN V  EDL++   R+ GVV NW
Sbjct:    3 MKDLKISQLIVKHYFQKLNDVLNVDVAIAGCGPSALALATELAKNGR-KVAIFEAKNEPGGGIWGGGMMFNELVLESELEWYLKEHHIKYKKEDEFIVVD--AVHFASAMLYNATKNGAYIFNNVFVEDLVMYNERISGVVINW 143          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_METMA (Putative thiazole biosynthetic enzyme OS=Methanosarcina mazei GN=MM_0222 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 1
Query:  295 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVK-GGRVGGVVTNWALVS 738
            + E I++R +   Y    + Y D D    G G A L  A  L++    ++AI EQ +  GGG W GG +F  +VV++ A   LD+ GI Y E E      ++      +++         +FN V+ ED++++   RV G+V NW  V+
Sbjct:    3 LDEVIITRAIFEEYSKTFLEYTDIDVALVGGGPANLVAAKYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRVLDDFGIRYKEYEPGYFVANSVESVGKLIAG-ATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVT 149          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_METBF (Putative thiazole biosynthetic enzyme OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A2100 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.118e-12
Identity = 48/155 (30.97%), Postives = 79/155 (50.97%), Query Frame = 1
Query:  295 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQE--HYVXDQHAALFTSTIMSKLL---PRPNVXLFNAVAAEDLIVK-GGRVGGVVTNWALVSM 741
            + E I++R +   Y    + Y + D    G G A L  A  L++    ++AI EQ +  GGG W GG +F  +VV++ A   LD+ GI Y E +  +YV +   +      + KL+         +FN V+ ED++++   RV G+V NW  V++
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTEVDVALIGGGPANLVAARYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRILDDFGIRYKEYQPGYYVANSVES------VGKLISGATSAGAEVFNLVSFEDVMIRENDRVTGIVVNWGPVTV 150          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.044e-11
Identity = 48/155 (30.97%), Postives = 78/155 (50.32%), Query Frame = 1
Query:  295 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQE--HYVXDQHAALFTSTIMSKLLP---RPNVXLFNAVAAEDLIVK-GGRVGGVVTNWALVSM 741
            + E  ++R +   Y+   +   D D    GAG A L  A  L++  ++++ + E+ +  GGG W GG +F  +VV+K A   LDE  I Y E E  +YV D      +  +++KL          L N V+ ED++++ G R+ G+V NW    M
Sbjct:    3 LDEVKITRAIVESYLESFLKCTDVDVALVGAGPANLVAAKRLAE-ADVRVVLFEKRLSVGGGLWGGGMMFPRIVVQKEACRILDEYDIWYREFEEGYYVAD------SIEVVAKLTAGAIDAGAELINLVSVEDVMIREGDRIVGLVINWTAADM 150          
The following BLAST results are available for this feature:
BLAST of EY729163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
THI4_HALMA2.934e-1429.59Putative thiazole biosynthetic enzyme OS=Haloarcul... [more]
THI4_HALSA3.832e-1430.72Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_HALS33.832e-1430.72Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_DESOH3.832e-1431.13Putative thiazole biosynthetic enzyme OS=Desulfoco... [more]
THI4_NATPD1.456e-1328.99Putative thiazole biosynthetic enzyme OS=Natronomo... [more]
THI4_METAC7.227e-1331.82Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_FERNB2.746e-1229.17Putative thiazole biosynthetic enzyme OS=Fervidoba... [more]
THI4_METMA3.587e-1230.87Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METBF6.118e-1230.97Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METTP1.044e-1130.97Putative thiazole biosynthetic enzyme OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-013-D01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729163 ID=EY729163; Name=EY729163; organism=Citrus sinensis; type=EST; length=848bp
CCACGCGTCCGCATCATCACTGCTGCAAATCAAATTACTTCTCATTATCA
AACTTCTAAGCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAACCATGGCAG
CCATGGCTTCTACAGCTTTCGCTCCTTCAGTTTCGTCCACCACCAATAAG
CTCTTTGACTCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACG
TCTTCAACCCATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTT
CTGCTTCTCCTCCTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAA
GAATCCATTGTTTCTCGTGAAATGACACGCAGGTACATGACGGACATGAT
CACTTATGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCC
TCTCTTGTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATT
ATCGAACAGTCTGTTATCCCCGGCGGTGGCGCGTGGCTCGGTGGACAGCT
CTTCTCTGCCATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGC
TTGGCATCGACTACGATGAGCAAGAACACTATGTTGNTGATCAGCATGCA
GCGCTGTTCACCTCCACTATAATGAGCAAGCTCCTGCCCCGCCCCAACGT
CNAGCTCTTTAATGCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCGGCA
GAGTTGGTGGTGTGGTGACCAACTGGGCGTTGGTGTCAATGAATCACGAT
ACACAGTCTTGCTTGGATCCCATGGTATGGAAGCGAAGGGGTTGTGAGCT
CCTGTTGCCATGATGGGCCTTTTGGGGCCCTGGAGTAANAGGTTAAAA
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