EY729163

Overview
NameEY729163
Unique NameEY729163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_METBU (Putative thiazole biosynthetic enzyme OS=Methanococcoides burtonii (strain DSM 6242) GN=Mbur_2109 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11
Identity = 43/150 (28.67%), Postives = 71/150 (47.33%), Query Frame = 1
Query:  295 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVK-GGRVGGVVTNWALVSM 741
            + E  +SR +   +    + Y D D    G G A L  A  L++   ++  I E+ +  GGG W GG +F  +VV++ A   LDE GI Y E E+     ++      ++S         +FN V  ED++++    + G+V NW  V +
Sbjct:    3 LDEVTISRAIIEEFSKVFLDYTDVDVALVGGGPANLVAAKYLAE-AGLKTVIYEKKLAVGGGMWAGGMMFPRIVVQEDALHILDEFGISYHEYENGYYVANSIESVGKLISG-ATSAGAEIFNLVNVEDVMIRENDEICGLVINWTAVEI 150          
BLAST of EY729163 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11
Identity = 44/158 (27.85%), Postives = 76/158 (48.10%), Query Frame = 1
Query:  274 NTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVIPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQEHYVXDQHAALFTSTIMSKLLPRPNVXLFNAVAAEDLIVKGG--RVGGVVTNWALVSM 741
            ++ K   I E  +SR + ++ M D + + + D    GAG AG+S AY L+K+  ++  + E+ +  GGG   G  LF  +V+  PA   L E+ I  ++ E  V    +A F + + +  +      + + V  +D+I +    RV GV   W    M
Sbjct:    3 DSIKIKAIDEVKISRYIIKQTMEDWMNFVENDVVIVGAGPAGMSAAYYLAKH-GLKTLVFERRLSFGGGIGGGAMLFHKLVIESPADEVLKEMNIRLEKVEDGVYIVDSAEFMAKLAASAID-AGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM 158          
The following BLAST results are available for this feature:
BLAST of EY729163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
THI4_METBU5.179e-1128.67Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_SULAC8.834e-1127.85Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-013-D01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729163 ID=EY729163; Name=EY729163; organism=Citrus sinensis; type=EST; length=848bp
CCACGCGTCCGCATCATCACTGCTGCAAATCAAATTACTTCTCATTATCA
AACTTCTAAGCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAACCATGGCAG
CCATGGCTTCTACAGCTTTCGCTCCTTCAGTTTCGTCCACCACCAATAAG
CTCTTTGACTCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACG
TCTTCAACCCATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTT
CTGCTTCTCCTCCTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAA
GAATCCATTGTTTCTCGTGAAATGACACGCAGGTACATGACGGACATGAT
CACTTATGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCC
TCTCTTGTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATT
ATCGAACAGTCTGTTATCCCCGGCGGTGGCGCGTGGCTCGGTGGACAGCT
CTTCTCTGCCATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGC
TTGGCATCGACTACGATGAGCAAGAACACTATGTTGNTGATCAGCATGCA
GCGCTGTTCACCTCCACTATAATGAGCAAGCTCCTGCCCCGCCCCAACGT
CNAGCTCTTTAATGCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCGGCA
GAGTTGGTGGTGTGGTGACCAACTGGGCGTTGGTGTCAATGAATCACGAT
ACACAGTCTTGCTTGGATCCCATGGTATGGAAGCGAAGGGGTTGTGAGCT
CCTGTTGCCATGATGGGCCTTTTGGGGCCCTGGAGTAANAGGTTAAAA
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