EY729156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729156 vs. ExPASy Swiss-Prot
Match: DBP3_YEAST (ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae GN=DBP3 PE=1 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 4.566e-53 Identity = 118/263 (44.87%), Postives = 163/263 (61.98%), Query Frame = 3 Query: 57 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST--DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYTNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVXFDLPNDIDDYVHRIGRTGRAGKSGLGTALFT 839 + G++ YGG P ++Q +L++ ++VATPGRL+DLL+ V L + YL LDEADRML+ GFE I+ I+++ D RQT++F+AT+PKE++ LAS F+ N I +++G T I Q VE V K L++LL + K L+F KK A +E L NG+ IHGD +QQ+R AL FKSGK+ +L+ATDVAARGLDIP+V V+ P ++DYVHRIGRTGRAG++G LFT Sbjct: 208 KVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDA---SKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPK--KNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFT 464
BLAST of EY729156 vs. ExPASy Swiss-Prot
Match: DBP3_CANAL (ATP-dependent RNA helicase DBP3 OS=Candida albicans GN=DBP3 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.566e-53 Identity = 120/279 (43.01%), Postives = 170/279 (60.93%), Query Frame = 3 Query: 9 RIYGLQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG--SSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYTNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVXFDLPNDIDDYVHRIGRTGRAGKSGLGTALFT 839 R LQI+ + + +GV V YGG + Q+R+++ +++VATPGRLVDL+ ++L + YL LDEADRML+ GFE I+ I+ RQT++F+AT+PKE++ LA++F+ + + + VG S+ I Q VE +++ DK L+ LL AN L+F KK A +E++L N F IHGD +QQ+R AL +FKSG++ +L+ATDVAARGLDIP+V V+ P I+DYVHRIGRTGRAG G LFT Sbjct: 233 RELALQIYDNLIELTADSGVNCVAVYGGVSKDDQIRKIKTA-NVVVATPGRLVDLINDGAINLGKVNYLVLDEADRMLEKGFEEDIKTIISNTSNSE---RQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDELSANKRITQVVEVINKFDKEKKLIQLLRKYNAN--ESSDNKILIFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNVKVVINLTFPLTIEDYVHRIGRTGRAGAKGTAHTLFT 505
BLAST of EY729156 vs. ExPASy Swiss-Prot
Match: RH42_ORYSJ (DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp. japonica GN=Os08g0159900 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.964e-53 Identity = 115/276 (41.67%), Postives = 167/276 (60.51%), Query Frame = 3 Query: 21 LQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERAR---VSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYTNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVXFDLPNDIDDYVHRIGRTGRAGKSGLGTALFT 839 +QIH + KKFS G+ V YGG+ + QQ+ EL+RG +I+V TPGR++D+L + +L+ + +L +DEADRM DMGFEPQI +IVQ RQT+LFSATFP++++ LA L + + VG I Q VE E+++ L++LL G + LVFV ++ D+L L+ +G+P ++HG + Q +RE L FKS +L+AT VAARGLD+ + VV +D+PN +DYVHR+GRTGRAG+ G + Sbjct: 511 VQIHSDIKKFSKALGINCVAIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPD----RQTVLFSATFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLVEVRPENERFFRLLELL------GEWFDKGKILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTLADFKSNVCSLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFIS 776
BLAST of EY729156 vs. ExPASy Swiss-Prot
Match: RH42_ARATH (DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana GN=RH42 PE=1 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 5.964e-53 Identity = 113/268 (42.16%), Postives = 167/268 (62.31%), Query Frame = 3 Query: 24 QIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERAR---VSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYTNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVXFDLPNDIDDYVHRIGRTGRAGKSG 818 QIH + +KFS G++ V YGG+ + QQ+ EL+RG +I+V TPGR++D+L + +L+ + +L +DEADRM DMGFEPQI +I+Q + RQT+LFSATFP++++ LA L + + VG I Q VE ESD+ L++LL G ++ LVFV++++ DAL + + +P ++HG + Q +RE + FK+ +L+AT VAARGLD+ + VV FD PN +DYVHR+GRTGRAG+ G Sbjct: 617 QIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPE----RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELL------GEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKG 874
BLAST of EY729156 vs. ExPASy Swiss-Prot
Match: PRP5_BOTFB (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Botryotinia fuckeliana (strain B05.10) GN=prp5 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.964e-53 Identity = 120/275 (43.64%), Postives = 166/275 (60.36%), Query Frame = 3 Query: 24 QIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYTNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVXFDLPNDIDDYVHRIGRTGRAGKSGLGTALFT 839 QIH E K F G++ V AYGGA I Q+ +L+RG +I+V TPGR+++LL RV+ LQ + Y+ LDEADRM DMGFEPQ+ K+ + RQT+LFSAT P+ + LA L + + + VG I Q VE E +K L++LL ++ N + A TL+FV+ ++ AD L L G+P +IHG + Q +R+ + FK+G PI++AT VAARGLD+ + VV FD PN ++DYVHR GRTGRAG +G T Sbjct: 642 QIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNIRPN----RQTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVAPEITQIVEVREEKEKFHRLLELL-GELYNT--DEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFIT 909
BLAST of EY729156 vs. ExPASy Swiss-Prot
Match: DDX42_DICDI (Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium discoideum GN=ddx42 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.964e-53 Identity = 116/273 (42.49%), Postives = 164/273 (60.07%), Query Frame = 3 Query: 24 QIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVH-ESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYTNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVXFDLPNDIDDYVHRIGRTGRAGKSGLGTALFT 839 QI++E K+S +K V YGG QQ +EL+ G +I+VATPGRL+D+++ L + YL LDEAD+M D GF PQ+ IV + RQT+LFSATF ++ A L++ I +++G +GS+ I Q V+ + +SDK + L + L ++ G L+FV TK + L L GF T+HGD+ Q ER +++FK GK IL+ATDVAARGLDIP + +VV +D DI+ + HRIGRTGRAG +G+ L T Sbjct: 393 QIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPD----RQTLLFSATFKPNVEEFARTILSDPIKISIGMIGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGS------VLIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLIT 655
BLAST of EY729156 vs. ExPASy Swiss-Prot
Match: DBP3_YEAS7 (ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP3 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.964e-53 Identity = 118/263 (44.87%), Postives = 163/263 (61.98%), Query Frame = 3 Query: 57 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSST--DLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYTNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVXFDLPNDIDDYVHRIGRTGRAGKSGLGTALFT 839 + G++ YGG P ++Q +L++ ++VATPGRL+DLL+ V L + YL LDEADRML+ GFE I+ I+++ D RQT++F+AT+PKE++ LAS F+ N I +++G T I Q VE V K L++LL + K L+F KK A +E L NG+ IHGD +QQ+R AL FKSGK+ +L+ATDVAARGLDIP+V V+ P ++DYVHRIGRTGRAG++G LFT Sbjct: 208 KVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDA---SKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPK--KNEKVLIFALYKKEAARVERNLKYNGYNIAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFT 464
BLAST of EY729156 vs. ExPASy Swiss-Prot
Match: DBP3_LODEL (ATP-dependent RNA helicase DBP3 OS=Lodderomyces elongisporus GN=DBP3 PE=3 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 5.964e-53 Identity = 121/280 (43.21%), Postives = 171/280 (61.07%), Query Frame = 3 Query: 9 RIYGLQIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVG--SSTDLIVQRVEFVHES-DKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYTNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVXFDLPNDIDDYVHRIGRTGRAGKSGLGTALFT 839 R LQI+ + + T V V YGG + Q++++ G +++VATPGRLVDL+ V L I YL LDEADRML+ GFE I+ I+ P RQT++F+AT+PKE++ LA++F+ + + +G S+ I Q VE + + K L++LL G +G + LVF KK A +E L+ N F IHGD +QQ+R AL+SFKSG+ +L+ATDVAARGLDIP+V +V+ P I+DYVHR+GRTGRAG++G+ FT Sbjct: 205 RELALQIYDNLEDLTRGTDVSCVAIYGGVSKDDQIKKIRNGANVVVATPGRLVDLINDGAVDLSSINYLVLDEADRMLEKGFEEDIKLIIGST---PAQGRQTLMFTATWPKEVRELANNFMNQPVKVTIGDRDELSANKRITQIVEVLDDKFQKEKKLINLLQKYQNTG-NGDNKI-LVFALYKKEASRIESLLHRNKFKVAAIHGDLSQQQRTQALQSFKSGECNLLLATDVAARGLDIPNVKYVINLTFPLTIEDYVHRLGRTGRAGQTGIAHTFFT 479
BLAST of EY729156 vs. ExPASy Swiss-Prot
Match: DDX23_HUMAN (Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23 PE=1 SV=3) HSP 1 Score: 207.608 bits (527), Expect = 7.789e-53 Identity = 121/309 (39.16%), Postives = 171/309 (55.34%), Query Frame = 3 Query: 24 QIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMP-----------PPGM-----------RQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYTNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVXFDLPNDIDDYVHRIGRTGRAGKSGLGTALFTRT-----YVLGKALL 869 QI E KF G++ V GG Q L G +I++ATPGRL+D+LE + L Y+ LDEADRM+DMGFEP ++KI++ M + P M RQT++F+AT P ++RLA +L + +G G + + Q+V + ES+KR L+ +L G ++FV KKG D L L G+ A T+HG + Q++RE AL + K+G ILVATDVA RG+DI V+ VV +D+ +I+DY+HRIGRTGRAGKSG+ T+ Y L +A+L Sbjct: 483 QIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE-------QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAIL 784
BLAST of EY729156 vs. ExPASy Swiss-Prot
Match: PRP28_SCLS1 (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp28 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.329e-52 Identity = 113/287 (39.37%), Postives = 168/287 (58.54%), Query Frame = 3 Query: 24 QIHVEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMP---------------------PPGMRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADALEHWLYTNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVXFDLPNDIDDYVHRIGRTGRAGKSGL 821 QI VEAKKF+ G V GG + +Q L G +I++ATPGRLVD +ER + L Y+ +DEADRM+D+GFE + KI+ + + RQTM+++AT P ++++A +L + +G +G + + + QRVEFV DKR ++ + +A+G Q +VFV K+ DA+ + GF + T+HG +TQ++RE AL S +SG T +LVATD+A RG+D+P V+ VV F++ +I+ Y HRIGRTGRAGKSG+ Sbjct: 470 QIEVEAKKFATPLGFTCVSIVGGHSLEEQSYNLRNGAEIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDDAEDAQAMSRHLGGKDRYRQTMMYTATMPPAVEKIAKKYLRRPAIVTIGNIGEAVETVEQRVEFVAGEDKRKKRLNEI---LASGEF--QPPIIVFVNIKRNCDAVARDIKHMGFTSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGV 751 The following BLAST results are available for this feature:
BLAST of EY729156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY729156 ID=EY729156; Name=EY729156; organism=Citrus sinensis; type=EST; length=893bpback to top |