EY729123

Overview
NameEY729123
Unique NameEY729123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_SYNY3 (Photosystem I reaction center subunit XI OS=Synechocystis sp. (strain PCC 6803) GN=psaL PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.261e-21
Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = 1
Query:  268 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGREKGA*SVANS*WGWG*SLGXIFFGGNSGVIWGLF 714
            QV+Q  NGDPF+G L TPI+ S     ++ NLPAYR  +SP+LRG+EVG+AHG+ L+GP+   GPLR++E             +++ +  L+ YG+ +F +GE  +   L                 GW       F GG  G     F
Sbjct:    6 QVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPWTLLGPLRDSEYQYIGGLIGALALILVATAALSSYGLVTF-QGEQGSGDTLQTAD-------------GWSQFAAGFFVGGMGGAFVAYF 140          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_MICAN (Photosystem I reaction center subunit XI OS=Microcystis aeruginosa (strain NIES-843) GN=psaL PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.840e-20
Identity = 56/149 (37.58%), Postives = 74/149 (49.66%), Query Frame = 1
Query:  268 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGREKGA*SVANS*WGWG*SLGXIFFGGNSGVIWGLF 714
            QV+ P N DPFIG L TPI++S     ++ NLPAYR  ++P+LRG+EVG+AHG+ L GP+V  GPLR++E             V++ + CL  YG+ SF     S  P                S  GW       F GG  G     F
Sbjct:    8 QVVTPYNDDPFIGHLATPISASGFTKAFIGNLPAYRPGLAPILRGLEVGMAHGYFLGGPWVVLGPLRDSEYANIGGLIPALAMVLLATGCLASYGLVSFQGKAASNDP--------------LKSAEGWSQFAAGFFIGGMGGAFVAYF 142          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_MASLA (Photosystem I reaction center subunit XI OS=Mastigocladus laminosus GN=psaL PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.133e-20
Identity = 50/113 (44.25%), Postives = 66/113 (58.41%), Query Frame = 1
Query:  211 SKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 549
            SK SP        S+    +V+ P   DP IG LETPI SSPL+ W++ NLPAYR  ++   RG+EVG+AHG+ + GPF K GPLRNT              ++IL+  LT+Y
Sbjct:    8 SKNSP--------SDPRNREVVFPAYRDPQIGDLETPINSSPLVKWFIGNLPAYRPGITTFRRGLEVGMAHGYWIFGPFAKLGPLRNTVNANLAGLLSALGLIIILTGALTLY 112          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_ANASP (Photosystem I reaction center subunit XI OS=Anabaena sp. (strain PCC 7120) GN=psaL PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.558e-19
Identity = 52/159 (32.70%), Postives = 79/159 (49.69%), Query Frame = 1
Query:  238 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGREKGA*SVANS*WGWG*SLGXIFFGGNSGVIWGLF 714
            K + S+    +V+ P   DP  G+LETP+ +SPL+ W+++NLPAYR  ++P  RG+EVG+AHG+ L GPF K GPLR+               VV+ ++ L++Y     +   P+    +T+            S  GW         GG  G +   F
Sbjct:    9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLALSLYA----NSNPPTALASVTVPNPP----DAFQSKEGWNNFASAFLIGGIGGAVVAYF 159          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_ANAVT (Photosystem I reaction center subunit XI OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaL PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.657e-19
Identity = 52/159 (32.70%), Postives = 78/159 (49.06%), Query Frame = 1
Query:  238 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGREKGA*SVANS*WGWG*SLGXIFFGGNSGVIWGLF 714
            K + S+    +V+ P   DP  G+LETP+ +SPL+ W+++NLPAYR  ++P  RG+EVG+AHG+ L GPF K GPLR+               VV+ ++ L++Y     +   P     +T+            S  GW         GG  G +   F
Sbjct:    9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLSLSLYA----NSNPPKALASVTVPNPP----DAFQSKEGWNNFASAFLIGGIGGAVVAYF 159          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_CYAA5 (Photosystem I reaction center subunit XI OS=Cyanothece sp. (strain ATCC 51142) GN=psaL PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.250e-18
Identity = 58/139 (41.73%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  289 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGREKGA*SVANS*WGWG*SLGXIFFGGNSGVIW 705
            GDP IG+L TP+ SS L   ++ NLPAYR  +S   RG+EVG+AHG+ L GPF   GPLRNTE             + IL+I L++Y  AS   G+P           + G  SV     GWG      F GG+ GVI+
Sbjct:    8 GDPQIGNLATPVNSSRLSLAFIRNLPAYRRGLSANRRGLEVGMAHGYFLYGPFAILGPLRNTEYASTGGLLSAVAMISILTIALSLY--ASVEVGKPIETLTTPDVPEDLGT-SV-----GWGEFANGFFIGGSGGVIF 138          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_SYNE7 (Photosystem I reaction center subunit XI OS=Synechococcus elongatus (strain PCC 7942) GN=psaL PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.458e-17
Identity = 55/144 (38.19%), Postives = 69/144 (47.92%), Query Frame = 1
Query:  289 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGREKGA*SVANS*WGWG*SLGXIFFGGNSGVIWGLFPA 720
            G P IG+L TPI SSP    +++ LP YR  +S   RG+E+G+AHGFLL GPF   GPLRNTE             VVIL++CL++YG A      PS A     T              GW         GG  G  +  + A
Sbjct:   10 GTPEIGNLATPINSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPFSILGPLRNTETAGSAGLLATVGLVVILTVCLSLYGNAG---SGPSAAESTVTTPNPPQELFTKE---GWSEFTSGFILGGLGGAFFAFYLA 147          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_SYNP6 (Photosystem I reaction center subunit XI OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaL PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.591e-16
Identity = 53/144 (36.81%), Postives = 66/144 (45.83%), Query Frame = 1
Query:  289 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGREKGA*SVANS*WGWG*SLGXIFFGGNSGVIWGLFPA 720
            G P IG L TP  SSP    +++ LP YR  +S   RG+E+G+AHGFLL GP    GPLRNTE             VVIL++CL++YG A      PS A     T              GW         GG  G  +  + A
Sbjct:    9 GTPEIGDLATPTNSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPLSILGPLRNTETAGSAGLLATVGLVVILTVCLSLYGNAG---SGPSAAESTVTTPNPPQELFTKE---GWSEFTSGFILGGLGGAFFAFYLA 146          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_PROM4 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9211) GN=psaL PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.773e-15
Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 1
Query:  274 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 549
            ++P++ DPF+G+LETP+ S      +++NLP YR+ +SP  RG+EVG A G+LL GPF   GPLRNT+             V IL+    +Y
Sbjct:   39 VKPVS-DPFVGNLETPVNSGYFTKAFINNLPFYRSGISPNFRGLEVGAAFGYLLYGPFAMTGPLRNTDFALTAGLLSTIGAVHILTALFVLY 129          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_SYNP2 (Photosystem I reaction center subunit XI OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=psaL PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.971e-14
Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 1
Query:  289 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLT 606
            GDP +G+L TPI +S     +++NLP YR  +S   RG+EVG+AHG+ L GPF   GPLRN +             + +L++ L++YG    S       P  TLT
Sbjct:    8 GDPQVGNLATPINASAFSKAFINNLPGYRQGLSAQRRGLEVGMAHGYFLYGPFALLGPLRNADFAGVAGLLGTVGLISLLTLALSLYGSVGVS------TPTATLT 107          
The following BLAST results are available for this feature:
BLAST of EY729123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
PSAL_SYNY38.261e-2135.57Photosystem I reaction center subunit XI OS=Synech... [more]
PSAL_MICAN1.840e-2037.58Photosystem I reaction center subunit XI OS=Microc... [more]
PSAL_MASLA9.133e-2044.25Photosystem I reaction center subunit XI OS=Mastig... [more]
PSAL_ANASP1.558e-1932.70Photosystem I reaction center subunit XI OS=Anabae... [more]
PSAL_ANAVT2.657e-1932.70Photosystem I reaction center subunit XI OS=Anabae... [more]
PSAL_CYAA52.250e-1841.73Photosystem I reaction center subunit XI OS=Cyanot... [more]
PSAL_SYNE71.458e-1738.19Photosystem I reaction center subunit XI OS=Synech... [more]
PSAL_SYNP63.591e-1636.81Photosystem I reaction center subunit XI OS=Synech... [more]
PSAL_PROM46.773e-1542.39Photosystem I reaction center subunit XI OS=Prochl... [more]
PSAL_SYNP21.971e-1438.68Photosystem I reaction center subunit XI OS=Synech... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-012-G10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729123 ID=EY729123; Name=EY729123; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGTCTATACAAAGCAGA
GCTCTTGGTAGAAACAGAAGTCTTTTAACAAACACAATCTCAAATGGCTT
CTGTTTCTTCTCCAATGGCCAGCCAGCTCAAGAGTAGCTTTACTTCACCA
GTTTCCAGGAGCCTGCTTACTCCAAGGGGTATCTCTGGATCTCCATTCAG
GGTTGTTCCCTCCAAGAGAAGCCCTCGTTTCCTTGTCAAAGCTATCCAAT
CTGAAAAGCCAACTTACCAAGTTATTCAGCCAATCAATGGTGATCCATTC
ATTGGAAGCTTGGAGACTCCAATTACATCAAGTCCATTGATTGCATGGTA
CCTCTCAAATCTACCAGCTTATCGGACGGCAGTCAGCCCACTACTGAGAG
GAGTAGAGGTGGGGTTGGCCCATGGATTCCTCCTTGTGGGTCCATTTGTT
AAGGCAGGGCCATTGAGAAACACAGAAATAGCAGGACCAGCAGGGTCATT
GGCAGCTGGTGGCCTTGTTGTGATCCTCAGCATTTGCTTGACAATCTATG
GAATTGCTTCATTCAGTGAAGGAGAGCCATCCACTGCTCCAGGCTTAACA
TTGACCGGAAGGGAGAAAGGAGCCTGATCAGTTGCAAACAGCTGATGGGG
GTGGGGCTAGTCACTGGGANGGATCTTCTTTGGTGGAAATTCTGGTGTCA
TTTGGGGCTTATTTCCTGCTTTACGTTCTTAACCTTCCCTACTTCGTTAA
ATAGAACTATGTAACATCTACTCTTTGGTTTTAAGATCCAATGTATCTCA
NNTTGCTACTCTGTAAATCTACTGTTTTGGGATTGTTATTGCAAATGAAA
CTGGCTCATTAACTGANANNANNACANNAANAGAAAANGAACANAGACAC
CAACCCAACAACAACAACACCGGG
back to top