EY729123

Overview
NameEY729123
Unique NameEY729123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_GLOVI (Photosystem I reaction center subunit XI OS=Gloeobacter violaceus GN=psaL PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.179e-13
Identity = 39/97 (40.21%), Postives = 56/97 (57.73%), Query Frame = 1
Query:  292 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPS 582
            DP  G+L TP+ +S  I W++ NLP  R  +    RG+E+G+AHG+ L+GPF   GPLRNTE+            ++I +I L+  G AS  E  P+
Sbjct:   11 DPQEGTLLTPVNNSTAIRWFIDNLPINRVGMDEFTRGLEIGMAHGYWLIGPFALLGPLRNTELGLVAGLVSTIGLLLISTIGLS--GYASLVEDVPT 105          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_PROMA (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus GN=psaL PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.280e-13
Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = 1
Query:  274 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 549
            + P++ DP +G+L TP+ S      +L+NLP YR  +SP  RG+EVG A G+LL GP+   GPLRNT+             V IL+  L +Y
Sbjct:   39 VTPVS-DPCVGNLSTPVNSGYFTKAFLNNLPFYRGGLSPNFRGLEVGAAFGYLLYGPYAMTGPLRNTDYALTAGLLGTIGAVHILTALLVLY 129          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_PROMS (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain AS9601) GN=psaL PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.412e-12
Identity = 36/86 (41.86%), Postives = 48/86 (55.81%), Query Frame = 1
Query:  292 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 549
            DP +G+L TP+ S      +++NLP YR  +SP  RG+E G A G+LL GPF   GPLRN+E             V IL+  L +Y
Sbjct:   44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSEFALTAGLLAAIGAVHILTALLVLY 129          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_PROM2 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9215) GN=psaL PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.412e-12
Identity = 44/138 (31.88%), Postives = 63/138 (45.65%), Query Frame = 1
Query:  292 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGREKGA*SVANS*WGWG*SLGXIFFGGNSGVIW 705
            DP +G+L TP+ S      +++NLP YR  +SP  RG+E G A G+LL GPF   GPLRN+E             V I++  L +Y      +      P  T+    K   + A    GW       + GG  G ++
Sbjct:   44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSEFAVTAGLLSAIGAVHIMTALLVLYNAP--GKAPNVQPPDATVNNPPKDLFTRA----GWADFTSGFWLGGCGGAVF 175          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_PROM0 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9301) GN=psaL PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.409e-12
Identity = 44/138 (31.88%), Postives = 62/138 (44.93%), Query Frame = 1
Query:  292 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGREKGA*SVANS*WGWG*SLGXIFFGGNSGVIW 705
            DP +G+L TP+ S      +++NLP YR  +SP  RG+E G A G+LL GPF   GPLRN+E             V IL+    +Y      +      P  T+    K   + A    GW       + GG  G ++
Sbjct:   44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSEFALTAGLLATIGAVHILTALFVLYNAP--GKAPNVQPPDATVNNPPKDLFTRA----GWADFTSGFWLGGCGGAVF 175          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_PROMP (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=psaL PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.367e-12
Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = 1
Query:  274 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 549
            ++P++ DP +G+L TP+ S      +++NLP YR  +SP  RG+E G A G+LL GPF   GPLRN++             V IL+  L +Y
Sbjct:   39 VKPVS-DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFSMTGPLRNSDFALTAGLLATIGAVHILTGLLVLY 129          
BLAST of EY729123 vs. ExPASy Swiss-Prot
Match: PSAL_PROM5 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9515) GN=psaL PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.367e-12
Identity = 34/86 (39.53%), Postives = 48/86 (55.81%), Query Frame = 1
Query:  292 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 549
            DP +G+L TP+ S      +++NLP YR  +SP  RG+E G A G+LL GPF   GPLRN++             V I++  L +Y
Sbjct:   44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSDFAITAGLLAAIGAVHIMTALLVLY 129          
The following BLAST results are available for this feature:
BLAST of EY729123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
PSAL_GLOVI2.179e-1340.21Photosystem I reaction center subunit XI OS=Gloeob... [more]
PSAL_PROMA8.280e-1341.30Photosystem I reaction center subunit XI OS=Prochl... [more]
PSAL_PROMS1.412e-1241.86Photosystem I reaction center subunit XI OS=Prochl... [more]
PSAL_PROM21.412e-1231.88Photosystem I reaction center subunit XI OS=Prochl... [more]
PSAL_PROM02.409e-1231.88Photosystem I reaction center subunit XI OS=Prochl... [more]
PSAL_PROMP5.367e-1239.13Photosystem I reaction center subunit XI OS=Prochl... [more]
PSAL_PROM55.367e-1239.53Photosystem I reaction center subunit XI OS=Prochl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-012-G10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729123 ID=EY729123; Name=EY729123; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGTCTATACAAAGCAGA
GCTCTTGGTAGAAACAGAAGTCTTTTAACAAACACAATCTCAAATGGCTT
CTGTTTCTTCTCCAATGGCCAGCCAGCTCAAGAGTAGCTTTACTTCACCA
GTTTCCAGGAGCCTGCTTACTCCAAGGGGTATCTCTGGATCTCCATTCAG
GGTTGTTCCCTCCAAGAGAAGCCCTCGTTTCCTTGTCAAAGCTATCCAAT
CTGAAAAGCCAACTTACCAAGTTATTCAGCCAATCAATGGTGATCCATTC
ATTGGAAGCTTGGAGACTCCAATTACATCAAGTCCATTGATTGCATGGTA
CCTCTCAAATCTACCAGCTTATCGGACGGCAGTCAGCCCACTACTGAGAG
GAGTAGAGGTGGGGTTGGCCCATGGATTCCTCCTTGTGGGTCCATTTGTT
AAGGCAGGGCCATTGAGAAACACAGAAATAGCAGGACCAGCAGGGTCATT
GGCAGCTGGTGGCCTTGTTGTGATCCTCAGCATTTGCTTGACAATCTATG
GAATTGCTTCATTCAGTGAAGGAGAGCCATCCACTGCTCCAGGCTTAACA
TTGACCGGAAGGGAGAAAGGAGCCTGATCAGTTGCAAACAGCTGATGGGG
GTGGGGCTAGTCACTGGGANGGATCTTCTTTGGTGGAAATTCTGGTGTCA
TTTGGGGCTTATTTCCTGCTTTACGTTCTTAACCTTCCCTACTTCGTTAA
ATAGAACTATGTAACATCTACTCTTTGGTTTTAAGATCCAATGTATCTCA
NNTTGCTACTCTGTAAATCTACTGTTTTGGGATTGTTATTGCAAATGAAA
CTGGCTCATTAACTGANANNANNACANNAANAGAAAANGAACANAGACAC
CAACCCAACAACAACAACACCGGG
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