EY729064

Overview
NameEY729064
Unique NameEY729064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729064 vs. ExPASy Swiss-Prot
Match: TPSD4_ABIGR (Delta-selinene synthase OS=Abies grandis GN=ag4 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.584e-21
Identity = 84/272 (30.88%), Postives = 124/272 (45.59%), Query Frame = 2
Query:   11 DFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLD-------QLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKE-------------NLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD----------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMI-TSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEK-----REDKNHLLLELA*LEFNTLQAIYQEELXDISGXVEGYRSWRE 718
            D + SLNS Y    Y    ++L  ++K  +    E  D       +L+++D L+ LG+  HFE E              Y W  E             +L AT+L FR LR H Y VS  V   FKD+   F C+            + +LSL  AS  S  GE +MEEA  FT ++L +++    +  + D  +  + K ALE P H  VP  EAR F+ +Y       + + N  +L+LA L+FN LQ  + +E+  I+      R WR+
Sbjct:   24 DLIHSLNSPYGAPAYYELLQKLIQEIKHLLLTEMEMDDGDHDLIKRLQIVDTLECLGIDRHFEHEIQTAALDYV-----YRWWNEKGIGEGSRDSFSKDLNATALGFRALRLHRYNVSSGVLKNFKDENGKFFCNFTGEEGRGDKQVRSMLSLLRASEISFPGEKVMEEAKAFTREYLNQVLAGHGDVTDVDQSLLREVKYALEFPWHCSVPRWEARSFLEIYGHNHSWLKSNINQKMLKLAKLDFNILQCKHHKEIQFIT------RWWRD 284          
BLAST of EY729064 vs. ExPASy Swiss-Prot
Match: GBIS2_ARATH ((Z)-gamma-bisabolene synthase 2 OS=Arabidopsis thaliana GN=TPS13 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.609e-21
Identity = 63/183 (34.43%), Postives = 94/183 (51.37%), Query Frame = 2
Query:  134 LIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKREDKNHLLLELA*LEFNTLQAIYQEEL 673
            LI +L  LGLA+HFE E             D    + +L   S+ FR+ R +G+ +   VF  F  D   F   + +D KGILSL+EA++     + I++EA +FTS HLK +++    +     +    +  L LP  W +  + AR +I  YE+ ED + +LL LA L F  LQ  Y +EL
Sbjct:   69 LIQSLLSLGLAFHFENEIKDILEDAFRRIDDITGDENDLSTISIMFRVFRTYGHNLPSSVFKRFTGDDGKFERSLTEDAKGILSLYEAAHLGTTTDYILDEALEFTSSHLKSLLVGGMCRPH---ILRLIRNTLYLPQRWNMEAVIAREYISFYEQEEDHDKMLLRLAKLNFKLLQLHYIKEL 248          
BLAST of EY729064 vs. ExPASy Swiss-Prot
Match: TPSD1_ABIGR (Alpha-bisabolene synthase OS=Abies grandis GN=ag1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.019e-21
Identity = 72/218 (33.03%), Postives = 111/218 (50.92%), Query Frame = 2
Query:  119 LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKEN----LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMM---ITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKRED--------------KNHLLLELA*LEFNTLQAIYQEELXDIS 685
            L++L ++DN+ RLG+  HFE E             +    W + N    L  T+L FRLLR H Y VS  +F  FKD    FIC       D   +L+L+ AS  +  GE+I++EA  F +K+L+E +    TS++      ++++ K AL+   H  VP +EA+ +  VY  R D               N   LEL  L+FN +Q+I+QEE+ +++
Sbjct:  299 LERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIFDNFKDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSETSSAWNNKQNLSQEIKYALKTSWHASVPRVEAKRYCQVY--RPDYARIAKCVYKLPYVNNEKFLELGKLDFNIIQSIHQEEMKNVT 514          
BLAST of EY729064 vs. ExPASy Swiss-Prot
Match: BARS_ARATH (Alpha-barbatene synthase OS=Arabidopsis thaliana GN=BS PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.861e-21
Identity = 71/221 (32.13%), Postives = 107/221 (48.42%), Query Frame = 2
Query:   47 ETYKRRAEELKGKVKTAI-----KDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKREDKNHLLLELA*LEFNTLQAIYQEELXDIS 685
            +  +R  E LK KV+  I      D       +  I  L  LGL+YHFE E            +D    +  L+  S  FR+ R +GY +S +VF  FK D   F   + +D KG+LS +EA ++    + I++EA  FT  HL+   + +  +     +++  + AL +P H  +  L AR +I  YE  ED +  LL+LA L F  LQ  Y +EL  I+
Sbjct:   38 DVLEREIEVLKPKVRENIFVSSSTDKDAMKKTILSIHFLDSLGLSYHFEKEIEESLKHAFEKIEDLIADENKLHTISTIFRVFRTYGYYMSSDVFKIFKGDDGKFKESLIEDVKGMLSFYEAVHFGTTTDHILDEALSFTLNHLES--LATGRRASPPHISKLIQNALHIPQHRNIQALVAREYISFYEHEEDHDETLLKLAKLNFKFLQLHYFQELKTIT 256          
BLAST of EY729064 vs. ExPASy Swiss-Prot
Match: GBIS1_ARATH ((Z)-gamma-bisabolene synthase 1 OS=Arabidopsis thaliana GN=TPS12 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.287e-20
Identity = 63/183 (34.43%), Postives = 93/183 (50.82%), Query Frame = 2
Query:  134 LIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKREDKNHLLLELA*LEFNTLQAIYQEEL 673
            LI  L  LGLA+HFE E             D    +++L   S+ FR+ R +G+ +   VF  F  D   F   + +D KGILSL+EA++     + I++EA +FTS HLK ++     +     +    +  L LP  W +  + AR +I  YE+ ED + +LL LA L F  LQ  Y +EL
Sbjct:   69 LIQLLLSLGLAFHFENEIKNILEHAFRKIDDITGDEKDLSTISIMFRVFRTYGHNLPSSVFKRFTGDDGKFQQSLTEDAKGILSLYEAAHLGTTTDYILDEALKFTSSHLKSLLAGGTCRPH---ILRLIRNTLYLPQRWNMEAVIAREYISFYEQEEDHDKMLLRLAKLNFKLLQLHYIKEL 248          
BLAST of EY729064 vs. ExPASy Swiss-Prot
Match: TASY_TAXBR (Taxadiene synthase OS=Taxus brevifolia GN=TDC1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.255e-18
Identity = 65/224 (29.02%), Postives = 108/224 (48.21%), Query Frame = 2
Query:  119 LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKENLY----ATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKR------------EDKNHLLLELA*LEFNTLQAIYQEELXDISGXVEGYRSWRE 718
            L++L L+DN++ LG+  HF+ E             +    W +++L      T+L  R LR HGY VS +V + FKD+   F         + + +++L  AS  +   E  M++A +F   +L+E + T  S    +F  ++ +  +E P H  +P LEAR +I  Y+                 N   LELA L+FN +Q+++QEEL  ++      R W+E
Sbjct:  353 LERLSLVDNIEHLGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRMHGYNVSSDVLNNFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKISTNTKLF--KEIEYVVEYPWHMSIPRLEARSYIDSYDDNYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLT------RWWKE 568          
BLAST of EY729064 vs. ExPASy Swiss-Prot
Match: TASY_TAXBA (Taxadiene synthase OS=Taxus baccata GN=TDC1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.769e-18
Identity = 64/224 (28.57%), Postives = 111/224 (49.55%), Query Frame = 2
Query:  119 LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKENLY----ATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYE-----KRED-------KNHLLLELA*LEFNTLQAIYQEELXDISGXVEGYRSWRE 718
            L++L L+DN++ LG+  HF+ E             +    W +++L      T+L  R LR HGY VS +V + FKD+   F         + + +++L  AS  +   E  M++A +F   +L++ + T  S    ++  ++ +  +E P H  +P LEAR +I  Y+     +R+         N   LELA L+FN +Q+++QEEL  ++      R W+E
Sbjct:  353 LERLSLVDNIEHLGIGRHFKQEIKVALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRTHGYDVSSDVLNNFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDEGAMDDARKFAEPYLRDALATKISTNTKLY--KEIEYVVEYPWHMSIPRLEARSYIDSYDDDYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLT------RWWKE 568          
BLAST of EY729064 vs. ExPASy Swiss-Prot
Match: TASY_TAXCH (Taxadiene synthase OS=Taxus chinensis GN=TDC1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.812e-17
Identity = 64/224 (28.57%), Postives = 110/224 (49.11%), Query Frame = 2
Query:  119 LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKENLY----ATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFI------HVYEKR------EDKNHLLLELA*LEFNTLQAIYQEELXDISGXVEGYRSWRE 718
            L++L L+DN++ LG+  HF+ E             +    W +++L      T+L  R LR HGY VS +V + FKD+   F         + + ++ L  AS  +   E  M++A +F   +L++ + T  S    +F  ++ +  +E P H  +P  EAR +I      +V+E++         N   LELA L+FN +Q+++QEEL  ++      R W+E
Sbjct:  353 LERLSLVDNIEHLGIGRHFKQEIKVALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRTHGYDVSSDVLNNFKDENGRFFSSAGQTHVELRSVVILFRASDLAFPDEGAMDDARKFAEPYLRDALATKISTNTKLF--KEIEYVVEYPWHMSIPRSEARSYIDSYDDDYVWERKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLT------RWWKE 568          
BLAST of EY729064 vs. ExPASy Swiss-Prot
Match: TPSDV_ABIGR (Abietadiene synthase, chloroplastic OS=Abies grandis GN=ag22 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.367e-17
Identity = 69/221 (31.22%), Postives = 108/221 (48.87%), Query Frame = 2
Query:  116 PLDQLE---LIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKEN----LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDFKG--------ILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVF---VAEQAKRALELPLHWKVPMLEARWFIH------------VYEKREDKNHLLLELA*LEFNTLQAIYQEELXDI 682
            PLD  E    +D ++RLG+  HF+ E             +    W +EN    +  T++  R+LR HGY VS +V   F+D+   F C  F G        +L+++  S+ S  GE+IMEEA   T ++L+  +   ++ ++  F   +  + + AL+ P H  +P LEAR +I             VY      N   LELA L+FN +Q+I+Q EL D+
Sbjct:  350 PLDLFERLWAVDTVERLGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFC--FLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNALENVDAFDKWAFKKNIRGEVEYALKYPWHKSMPRLEARSYIENYGPDDVWLGKTVYMMPYISNEKYLELAKLDFNKVQSIHQTELQDL 568          
BLAST of EY729064 vs. ExPASy Swiss-Prot
Match: TPSD1_GINBI (Levopimaradiene synthase, chloroplastic OS=Ginkgo biloba GN=LPS PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.004e-16
Identity = 71/234 (30.34%), Postives = 108/234 (46.15%), Query Frame = 2
Query:  116 PLDQLE---LIDNLQRLGLAYHFEPEXXXXXXXXXXXX---KDYNWRKEN----LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDFKG--------ILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAE---QAKRALELPLHWKVPMLEARWFIH------------VYEKREDKNHLLLELA*LEFNTLQAIYQEELXDISGXVEGYRSWRE 718
            PLD  E    +D ++RLG+  +F+ E               +   W + N    +  T++  R+LR HGY VS +V   F+D+K  F C  F G         L+L+  S     GE IMEEA  FT+ HL+  +  +N+ ++     +   + + A++ P H  +P LEAR +I             VY+     N   LELA L+FN +QA++Q+E   I         WRE
Sbjct:  352 PLDLFERLWAVDTVERLGIDRYFKKEIKESLDYVYRYWDAERGVGWARCNPIPDVDDTAMGLRILRLHGYNVSSDVLENFRDEKGDFFC--FAGQTQIGVTDNLNLYRCSQVCFPGEKIMEEAKTFTTNHLQNALAKNNAFDKWAVKKDLPGEVEYAIKYPWHRSMPRLEARSYIEQFGSNDVWLGKTVYKMLYVSNEKYLELAKLDFNMVQALHQKETQHIVSW------WRE 577          
The following BLAST results are available for this feature:
BLAST of EY729064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
TPSD4_ABIGR1.584e-2130.88Delta-selinene synthase OS=Abies grandis GN=ag4 PE... [more]
GBIS2_ARATH4.609e-2134.43(Z)-gamma-bisabolene synthase 2 OS=Arabidopsis tha... [more]
TPSD1_ABIGR6.019e-2133.03Alpha-bisabolene synthase OS=Abies grandis GN=ag1 ... [more]
BARS_ARATH7.861e-2132.13Alpha-barbatene synthase OS=Arabidopsis thaliana G... [more]
GBIS1_ARATH2.287e-2034.43(Z)-gamma-bisabolene synthase 1 OS=Arabidopsis tha... [more]
TASY_TAXBR1.255e-1829.02Taxadiene synthase OS=Taxus brevifolia GN=TDC1 PE=... [more]
TASY_TAXBA4.769e-1828.57Taxadiene synthase OS=Taxus baccata GN=TDC1 PE=3 S... [more]
TASY_TAXCH1.812e-1728.57Taxadiene synthase OS=Taxus chinensis GN=TDC1 PE=2... [more]
TPSDV_ABIGR2.367e-1731.22Abietadiene synthase, chloroplastic OS=Abies grand... [more]
TPSD1_GINBI2.004e-1630.34Levopimaradiene synthase, chloroplastic OS=Ginkgo ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-012-B03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729064 ID=EY729064; Name=EY729064; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGATTTTTTGCAGTCACTGAATAGCAACTATACGGATGAAA
CATACAAAAGACGAGCAGAAGAGCTGAAGGGAAAAGTGAAGACAGCGATT
AAGGATGTAACCGAGCCTCTGGATCAGTTGGAGCTGATTGATAATTTGCA
AAGACTTGGATTGGCTTATCATTTTGAGCCTGAGATTCGGAACATATTGC
GTAATATCCACAACCATAATAAAGATTATAATTGGAGAAAAGAAAATCTG
TATGCAACCTCCCTTGAATTCAGACTACTTAGACAACATGGCTATCCTGT
TTCTCAAGAGGTTTTCAGTGGTTTTAAAGACGACAAGGTAGGCTTCATTT
GTGATGATTTCAAGGGAATACTGAGCTTGCATGAAGCCTCGTATTACAGC
TTAGAAGGAGAAAGCATCATGGAGGAGGCCTGGCAATTCACCAGTAAGCA
TCTTAAAGAAATGATGATCACCAGCAACAGCAAGGAAGAGGATGTATTTG
TAGCAGAACAAGCGAAGCGGGCGCTGGAGCTCCCTCTGCATTGGAAAGTG
CCTATGTTAGAGGCAAGGTGGTTCATACACGTTTATGAGAAAAGAGAGGA
CAAGAACCACCTTTTACTTGAGCTCGCNTAGTTGGAGTTTAACACTTTGC
AGGCAATTTACCAGGAAGAACTTANAGACATTTCAGGGNTGGTGGAAGGA
TACAGGTCTTGGAGAGAAATTGAGCTTTGCGAGGAACAAGTTGGTAACGT
CCCTCTTATGGAGCATGGGGATCGCGTTTGAGCCTCCATTCGCCTACTGC
AGGAGAGTGTCACAATCTCGATACCCCTAATTCAGTGATTGATGACTTTA
TGATGTCTATGGAACATTGGATGACCTGAGATTTCCCTGATG
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