EY729059

Overview
NameEY729059
Unique NameEY729059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_HELMI (3-isopropylmalate dehydratase large subunit OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=leuC PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.909e-20
Identity = 51/146 (34.93%), Postives = 83/146 (56.85%), Query Frame = 1
Query:  364 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            MT+TEKI A  + K  + PG+ +   +D+++ +DV  P S  I + E      V+D+E++V++ DH++   D ++     I+RDF  + +I + YD+ D+G          + H  L +KG   PG+ ++G DSHTCT GA G FA
Sbjct:    3 MTITEKILAAHAGKASVEPGELIQAKLDLVLANDVTAPVS--IKELEKASLDAVFDKERVVLVQDHFVPAKDIKSAEQSKIVRDFARKHDITHHYDVGDMG----------IEHCLLPEKGLVVPGDAVIGADSHTCTYGALGAFA 136          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_THEYD (3-isopropylmalate dehydratase large subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=leuC PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.925e-19
Identity = 50/146 (34.25%), Postives = 86/146 (58.90%), Query Frame = 1
Query:  364 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            MT+ EKI A  + K +++PG+ +   VDI++ +D+  P +   F+K   ++  V+DRE+I ++PDH+    D +A     +LR+F  +  IK++++I  +G          + H  L ++G   PG++++G DSHTCT GA G FA
Sbjct:    3 MTIAEKILAAHAGKKEVTPGEIINAKVDIVLANDITAPIAIKEFEKLGVKD--VFDRERIALVPDHFTPQKDIKAAEQCKMLREFAQKYKIKHYFEIGRVG----------IEHALLPEEGIVLPGDLVIGADSHTCTYGALGAFA 136          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_CALS8 (3-isopropylmalate dehydratase large subunit OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=leuC PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19
Identity = 49/146 (33.56%), Postives = 89/146 (60.96%), Query Frame = 1
Query:  364 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            MT+++KI A  + K  + PGD ++ NVD+++ +DV  P +   F+K  G + KV+D++KI I+PDH+    D ++ +   ++R+F  + +I  ++++ ++G          + H  L +KG   PG++++G DSHTCT GA G F+
Sbjct:    5 MTMSQKILAYHAGKEYVEPGDLIFANVDLVLGNDVTTPVAIKEFEK-IGVD-KVFDKDKITIVPDHFTPNKDIKSAQQCKMVREFAKKYDITNYFEVGEMG----------IEHALLPEKGLVVPGDLVIGADSHTCTYGALGAFS 138          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_MOOTA (3-isopropylmalate dehydratase large subunit OS=Moorella thermoacetica (strain ATCC 39073) GN=leuC PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.744e-19
Identity = 52/146 (35.62%), Postives = 81/146 (55.48%), Query Frame = 1
Query:  364 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            MT+TEKI A  +    + PG  +   VD+ + +D+  P +   FKK  G   KV+D E++V++PDH+    D ++     ILRDF  EQ + ++++I  +          G+ H  L + G   PG++++G DSHTCT GA G FA
Sbjct:    3 MTITEKILAAHAGLKAVEPGQLINAKVDLALGNDITAPLAIQEFKK-LGVK-KVFDPERVVLVPDHFTPAKDIKSAEQAKILRDFAREQGLTHYFEIGRM----------GIEHCLLPEAGLVGPGDLVIGADSHTCTYGALGAFA 136          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_DESHY (3-isopropylmalate dehydratase large subunit OS=Desulfitobacterium hafniense (strain Y51) GN=leuC PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.492e-18
Identity = 52/147 (35.37%), Postives = 81/147 (55.10%), Query Frame = 1
Query:  361 AMTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            AMT+TEKI A  +   ++ PG  +   +D+ + +D+ GP S   F+K FG    VWD+ K+ ++PDH+    D  +      LR+F  +Q I ++++   +G          V H  L ++G   PG+V++G DSHTCT GA G FA
Sbjct:    2 AMTITEKILAEHAGLDKVVPGQLITAQLDLALANDITGPVSIREFEK-FGVET-VWDKTKVALVPDHFTPNKDIASAELSKALREFAKKQGIVHYWEQGRVG----------VEHCLLPEQGVTLPGDVIIGADSHTCTYGALGAFA 136          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_ANATD (3-isopropylmalate dehydratase large subunit OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=leuC PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.948e-18
Identity = 48/146 (32.88%), Postives = 88/146 (60.27%), Query Frame = 1
Query:  364 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            MT+++KI A  + K  + PGD ++ NVD+++ +DV  P +   F+K  G + +V+D++KI I+PDH+    D ++ +   ++R+F  +  I  ++++ ++G          + H  L +KG   PG++++G DSHTCT GA G F+
Sbjct:    5 MTMSQKILAYHAGKEYVEPGDLIFANVDLVLGNDVTTPVAIKEFEK-IGID-RVFDKDKIAIVPDHFTPNKDIKSAQQCKMVREFAKKYEITNYFEVGEMG----------IEHALLPEKGLVVPGDLVIGADSHTCTYGALGAFS 138          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_HALOH (3-isopropylmalate dehydratase large subunit OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=leuC PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18
Identity = 49/148 (33.11%), Postives = 83/148 (56.08%), Query Frame = 1
Query:  364 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENA--KVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            MT+ EKI A  + + ++ PGD V   +D ++ +DV  P    +  KEF +    +V+D+++I I+PDH+    D ++      +R+F  ++ I  +++I ++G          + H  L +KG   PGE+++G DSHTCT GA G FA
Sbjct:    3 MTMIEKIIAAHTNRDKVKPGDIVNARIDFVLGNDVTTP----VAVKEFNKIGIDEVFDQDRIAIVPDHFTPNKDIKSAEQCKFIREFARDKGIHNYFEIGEMG----------IEHCLLPEKGLALPGEIIIGADSHTCTYGALGAFA 136          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC1_PYRFU (3-isopropylmalate dehydratase large subunit 1 OS=Pyrococcus furiosus GN=leuC1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18
Identity = 55/146 (37.67%), Postives = 79/146 (54.11%), Query Frame = 1
Query:  364 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            MT+ EKI A  + K ++ PG+ V   VD +  +DV  P +   F+K   E  KV+D E+I I+ DH+    D +A       R+F  EQ IK+F++  ++G          V H  L + G   PGE+++G DSHTCT GA G FA
Sbjct:    4 MTIAEKILATHAGKEEVKPGEIVLAKVDFMFGNDVTTPLAIKTFRKIGVE--KVFDPERIAIVLDHFTPNKDIKAAEQCKFSREFAREQGIKWFFEGGNVG----------VEHCLLPELGLVLPGELIIGADSHTCTYGALGAFA 137          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_AQUAE (3-isopropylmalate dehydratase large subunit OS=Aquifex aeolicus GN=leuC PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.323e-18
Identity = 49/146 (33.56%), Postives = 85/146 (58.22%), Query Frame = 1
Query:  364 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            MT+TEKI A  + K ++ PG+ +   +D+ M +DV  P +  I +K +G + KV+D E+I ++  H++   D ++     I+R+F  +  IK+F++           + +G+ H  L ++G   PG++++G DSHTCT GA G FA
Sbjct:    3 MTITEKILAEHAGKKEVHPGELITAKIDLAMANDVTAPLAIKILEK-YGID-KVFDPERIALVLSHFVPAKDIKSAEQAKIVREFVKKHGIKWFFE-----------EGEGIEHAILPEQGLVVPGDLVVGADSHTCTYGALGAFA 135          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_CLOTH (3-isopropylmalate dehydratase large subunit OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=leuC PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.340e-18
Identity = 52/146 (35.62%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  364 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            MT+T+KI A  +   ++SPG  +   +D+++ +D+  P +   F+K  G N KV+D  KI I+PDH+    D ++   V  +R+F  E  I  F+++  +G          V H  L +KG   PG+V++G DSHTCT GA G F+
Sbjct:    3 MTMTQKILADHAGLDKVSPGQLIKAKLDMVLGNDITTPVAVKEFRK-IGVN-KVFDVNKIAIVPDHFTPNKDIKSAEQVKFIREFAREMGIVNFFEVGQMG----------VEHALLPEKGLVVPGDVVIGADSHTCTYGALGAFS 136          
The following BLAST results are available for this feature:
BLAST of EY729059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
LEUC_HELMI7.909e-2034.933-isopropylmalate dehydratase large subunit OS=Hel... [more]
LEUC_THEYD3.925e-1934.253-isopropylmalate dehydratase large subunit OS=The... [more]
LEUC_CALS85.126e-1933.563-isopropylmalate dehydratase large subunit OS=Cal... [more]
LEUC_MOOTA8.744e-1935.623-isopropylmalate dehydratase large subunit OS=Moo... [more]
LEUC_DESHY1.492e-1835.373-isopropylmalate dehydratase large subunit OS=Des... [more]
LEUC_ANATD1.948e-1832.883-isopropylmalate dehydratase large subunit OS=Ana... [more]
LEUC_HALOH2.544e-1833.113-isopropylmalate dehydratase large subunit OS=Hal... [more]
LEUC1_PYRFU2.544e-1837.673-isopropylmalate dehydratase large subunit 1 OS=P... [more]
LEUC_AQUAE3.323e-1833.563-isopropylmalate dehydratase large subunit OS=Aqu... [more]
LEUC_CLOTH4.340e-1835.623-isopropylmalate dehydratase large subunit OS=Clo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-012-A08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729059 ID=EY729059; Name=EY729059; organism=Citrus sinensis; type=EST; length=838bp
CCACGCGTCCGTGATTTTTTATATTGTTTGTGATCAAACTTTCTCTCAGC
CGCCGCCGCCACTTTCTTAGGAAACAAACTAAATTTAGACACTCTTAAAT
CTTAATCCCTACAGAACAAACCAAACCAAAAAAAAACAGGCCTCTTGTAG
CAAATAAACATGGCTTCCTCTGTCATTTCCCCAGCTCCAACATCTTCTTT
CATCAACAACAAGAAGGATTTGGGTAGCTTTTGTTTTTCGTCGACATCAC
AATTTTCAGTCAACAAATGCAAGAAATTGGCAGTCTCCAAGAAAATTGTG
TCGGTCATGGCACCTCAGCAATCAGAACGCCGGCCTGCCACCACTGGCTC
GGTAAAAAATGCGATGACGTTGACGGAGAAGATATTTGCCAGGGCTTCAG
AGAAACCCCAGTTGAGCCCGGGAGACAATGTGTGGGTTAATGTTGATATC
TTGATGACCCACGATGTTTGTGGCCCCGGCTCCTTTGGTATCTTTAAAAA
AGAGTTTGGTGAAAATGCTAAGGTTTGGGACCGTGAAAAGATTGTCATTA
TACCTGATCATTATATATTCACAAGTGATGAACGTGCAAATCGTAATGTG
GATATCCTGAGGGATTTCTGCATGGAGCAGAATATCAAGTACTTTTATGA
TATTAAAGATCTTGGGTACTTTAAGGCTAACCCGGATTATAAAGGCGTAT
GTCATATTGCACTTGCCCAAAAAGGCCATTGCAGGCCTGGAGAGGTCTTG
CTAGGTACAGACTCCCACACATGTACTGCTGGAGCATTTGGCCCATTTGC
ACTGGCATGGGCACACTGATGCAGGTTTATATTGGGCA
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