EY729059

Overview
NameEY729059
Unique NameEY729059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_ARCB4 (3-isopropylmalate dehydratase large subunit OS=Arcobacter butzleri (strain RM4018) GN=leuC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.182e-15
Identity = 50/145 (34.48%), Postives = 81/145 (55.86%), Query Frame = 1
Query:  367 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            T+TEKIF+  + K ++  G+ V   +D+++ +D+  P S   F++  G   K+ + +   I+ DH+I   D  +     I RDF ++ N+K F+D KD+G          + H  L +KG   PG+V++G DSHTCT GA G F+
Sbjct:    4 TITEKIFSEHAGK-KVYAGEIVRSPIDMVIGNDITTPISIRAFEE--GGFEKLANPDGFAIVLDHFIPAKDIASANQAKISRDFALKHNLKNFFDEKDMG----------IEHALLPEKGLVIPGDVIIGADSHTCTHGALGAFS 135          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_SULSO (3-isopropylmalate dehydratase large subunit OS=Sulfolobus solfataricus GN=leuC PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.633e-15
Identity = 54/148 (36.49%), Postives = 77/148 (52.03%), Query Frame = 1
Query:  358 NAMTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            +A TLTEKI +RAS K  +SPGD +   VD++  HD+ G     + +K      KV+D+ K+VI  DH     D R+      +R F   + I  FYDI             G+ H  + ++ +  PG+V+L  DSHT T+GA G FA
Sbjct:    3 SAKTLTEKILSRASGK-DVSPGDVIEAKVDLVAFHDLTGYHVIEVMEK--ANMIKVFDKSKLVIAFDHLAPPPDVRSAEIQGYIRKFVKSEGIPNFYDIN-----------YGILHEVMIEQ-YANPGQVILAADSHTTTSGAVGAFA 135          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_METB6 (3-isopropylmalate dehydratase large subunit OS=Methanoregula boonei (strain 6A8) GN=leuC PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.439e-15
Identity = 51/145 (35.17%), Postives = 75/145 (51.72%), Query Frame = 1
Query:  367 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            T+ EKIF+R      +  G+ V   +D  M HD+ GP +   F +  G+  +V+D + ++++ DH I      A  N   +R F  EQ I + YDI +           GVCH  + +KG   PGE+++G DSHTC  GA G FA
Sbjct:    4 TIVEKIFSRKCGS-DIKAGEVVMAPIDGAMIHDITGPLAIRKFYEMGGK--QVFDPKSVIMLFDHQIPADSLEAAENHVFMRKFAAEQGI-HNYDINE-----------GVCHQVVLEKGRAAPGEIVVGADSHTCMYGAVGAFA 133          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_CAMFF (3-isopropylmalate dehydratase large subunit OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=leuC PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.439e-15
Identity = 49/145 (33.79%), Postives = 77/145 (53.10%), Query Frame = 1
Query:  367 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            T+TEKIF+   +    + G  V   +D+++ +D+  P S   FK+   +  K+ + +   I+ DHYI   D  +     I RDF  E ++K F+D KD+G          + H  + +KG   PG+V++G DSHTCT GA G F+
Sbjct:    4 TITEKIFSEHVQHAVYA-GQIVETKIDMVIGNDITTPISIRAFKESGAK--KLANPDGFAIVMDHYIPAKDIASANQAKISRDFAYEHDLKNFFDEKDMG----------IEHALMPEKGLVVPGDVIIGADSHTCTHGALGAFS 135          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_CAMC1 (3-isopropylmalate dehydratase large subunit OS=Campylobacter concisus (strain 13826) GN=leuC PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.491e-15
Identity = 48/145 (33.10%), Postives = 81/145 (55.86%), Query Frame = 1
Query:  367 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            T+TEKIF+    K ++S G+ +   +D+++ +D+  P S   F++   +  K+ + +   I+ DHYI T D  +     I R+F  + ++K ++D KD+G          + H  L +KG   PG+V++G DSHTCT GA G F+
Sbjct:    4 TITEKIFSDHVGK-EVSAGEIIESKIDMIIGNDITTPISIKQFERSGAK--KLANPDGFAIVMDHYIPTKDILSANQAKISREFAYKHDLKNYFDEKDMG----------IEHAILPEKGLVIPGDVIIGADSHTCTHGALGAFS 135          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC2_DEIRA (3-isopropylmalate dehydratase large subunit 2 OS=Deinococcus radiodurans GN=leuC2 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.660e-15
Identity = 44/146 (30.14%), Postives = 76/146 (52.05%), Query Frame = 1
Query:  364 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            MT+ EK+ A  S    + PG  +    D ++ H++  P +  + ++   +  +V+D +KIV +PDH +   + +A +    L+ +  E+ I++FYD+             G+ H+ L   G  +PG+ L+  DSHTC AGA G FA
Sbjct:    3 MTIAEKMLAAHSGHDTVVPGQLIECATDWVLCHEITTPAALRMLEERGMD--RVFDPQKIVAVPDHSVPAMNIKAAKMYQKLKSWVQEKGIEHFYDV----------GRGGIAHVVLENTGLMKPGQTLVSGDSHTCNAGALGAFA 136          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_SULAC (3-isopropylmalate dehydratase large subunit OS=Sulfolobus acidocaldarius GN=leuC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.307e-14
Identity = 53/145 (36.55%), Postives = 79/145 (54.48%), Query Frame = 1
Query:  367 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            TLTEKI +RAS K  +SPGD   + VD++  HD+ G     + + + G   KV+DREK+VI  DH     D R+      +R+F  + ++  FYDI             G+ H  + ++ +  PG+V++  DSHT T+GA G FA
Sbjct:    4 TLTEKILSRASGK-NVSPGDVTEIKVDLVAFHDLTGYHVIEVME-DVG-TLKVFDREKLVIAFDHLAPPPDVRSAEIQGQIRNFVKKTSVPNFYDIN-----------SGILHQIMIER-YANPGQVIVAADSHTSTSGAVGAFA 133          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_CAMC5 (3-isopropylmalate dehydratase large subunit OS=Campylobacter curvus (strain 525.92) GN=leuC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.307e-14
Identity = 48/145 (33.10%), Postives = 78/145 (53.79%), Query Frame = 1
Query:  367 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            T+TEKIF+    + ++   + +   +D+++ +D+  P S   F++      K+ + E   I+ DHYI   D  +     I RDF  + ++KYF+D KD+G          + H  L +KG   PG+V++G DSHTCT GA G F+
Sbjct:    4 TITEKIFSDHVGR-EVFANEIIESGIDMVIGNDITTPISIKQFERSGA--TKLANPEGFCIVMDHYIPAKDILSANQAKISRDFAYKHDLKYFFDEKDMG----------IEHALLPEKGLIVPGDVIIGADSHTCTHGALGAFS 135          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_SULDN (3-isopropylmalate dehydratase large subunit OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=leuC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.707e-14
Identity = 49/147 (33.33%), Postives = 79/147 (53.74%), Query Frame = 1
Query:  361 AMTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            A T+TEKIF++   +   + G+ +  N+D+++ +D+  P S   F  E     K+ + +   I+ DH+I   D  +     I RDF  + ++K F+D KD+G          + H  L +KG   PG+V++G DSHTCT GA G F+
Sbjct:    2 AQTITEKIFSQHVGRAVFA-GEIIRCNIDMVIGNDITTPISIKAF--EDSGATKLANPDGFSIVLDHFIPAKDIASANQARISRDFAKKYSLKNFFDEKDMG----------IEHALLPEKGLVVPGDVIIGADSHTCTHGALGAFS 135          
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_SULTO (3-isopropylmalate dehydratase large subunit OS=Sulfolobus tokodaii GN=leuC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.229e-14
Identity = 57/145 (39.31%), Postives = 75/145 (51.72%), Query Frame = 1
Query:  367 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801
            TLTEKI +RAS K  ++PGD V V VDI   HD+ G     + +K      KV+D++KIVI  DH     D R+      +R F  E  I  F+DI             G+ H  L +K +  PG V++  DSHT T+GA G FA
Sbjct:    4 TLTEKILSRASGK-SVAPGDVVEVKVDIAAFHDLTGYHVIEVMEK--AGMLKVFDKQKIVIAFDHLAPPPDVRSAEIQTQIRKFVKELKIPNFHDIN-----------VGILHQILLEK-YANPGYVIVAADSHTTTSGAVGAFA 133          
The following BLAST results are available for this feature:
BLAST of EY729059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
LEUC_ARCB41.182e-1534.483-isopropylmalate dehydratase large subunit OS=Arc... [more]
LEUC_SULSO2.633e-1536.493-isopropylmalate dehydratase large subunit OS=Sul... [more]
LEUC_METB63.439e-1535.173-isopropylmalate dehydratase large subunit OS=Met... [more]
LEUC_CAMFF3.439e-1533.793-isopropylmalate dehydratase large subunit OS=Cam... [more]
LEUC_CAMC14.491e-1533.103-isopropylmalate dehydratase large subunit OS=Cam... [more]
LEUC2_DEIRA7.660e-1530.143-isopropylmalate dehydratase large subunit 2 OS=D... [more]
LEUC_SULAC1.307e-1436.553-isopropylmalate dehydratase large subunit OS=Sul... [more]
LEUC_CAMC51.307e-1433.103-isopropylmalate dehydratase large subunit OS=Cam... [more]
LEUC_SULDN1.707e-1433.333-isopropylmalate dehydratase large subunit OS=Sul... [more]
LEUC_SULTO2.229e-1439.313-isopropylmalate dehydratase large subunit OS=Sul... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-012-A08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729059 ID=EY729059; Name=EY729059; organism=Citrus sinensis; type=EST; length=838bp
CCACGCGTCCGTGATTTTTTATATTGTTTGTGATCAAACTTTCTCTCAGC
CGCCGCCGCCACTTTCTTAGGAAACAAACTAAATTTAGACACTCTTAAAT
CTTAATCCCTACAGAACAAACCAAACCAAAAAAAAACAGGCCTCTTGTAG
CAAATAAACATGGCTTCCTCTGTCATTTCCCCAGCTCCAACATCTTCTTT
CATCAACAACAAGAAGGATTTGGGTAGCTTTTGTTTTTCGTCGACATCAC
AATTTTCAGTCAACAAATGCAAGAAATTGGCAGTCTCCAAGAAAATTGTG
TCGGTCATGGCACCTCAGCAATCAGAACGCCGGCCTGCCACCACTGGCTC
GGTAAAAAATGCGATGACGTTGACGGAGAAGATATTTGCCAGGGCTTCAG
AGAAACCCCAGTTGAGCCCGGGAGACAATGTGTGGGTTAATGTTGATATC
TTGATGACCCACGATGTTTGTGGCCCCGGCTCCTTTGGTATCTTTAAAAA
AGAGTTTGGTGAAAATGCTAAGGTTTGGGACCGTGAAAAGATTGTCATTA
TACCTGATCATTATATATTCACAAGTGATGAACGTGCAAATCGTAATGTG
GATATCCTGAGGGATTTCTGCATGGAGCAGAATATCAAGTACTTTTATGA
TATTAAAGATCTTGGGTACTTTAAGGCTAACCCGGATTATAAAGGCGTAT
GTCATATTGCACTTGCCCAAAAAGGCCATTGCAGGCCTGGAGAGGTCTTG
CTAGGTACAGACTCCCACACATGTACTGCTGGAGCATTTGGCCCATTTGC
ACTGGCATGGGCACACTGATGCAGGTTTATATTGGGCA
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