EY729058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_DEBHA (5'-3' exoribonuclease 2 OS=Debaryomyces hansenii GN=RAT1 PE=3 SV=4) HSP 1 Score: 174.481 bits (441), Expect = 7.598e-43 Identity = 91/200 (45.50%), Postives = 124/200 (62.00%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHLFKLL 661 + VPGEGEHK+MS++R QR+ P YDPNT+HC+YGLDADLI L LATHE HF +LRE VF Q + + Q + A++ A KKP+ +LH+ LREYL+ E P+ F DLE +DD++FMCFFVGNDFLPH+P+L++R+ I++L+ +K+ L Y+T +L VE L L Sbjct: 195 ATVPGEGEHKLMSFIRSQRSDPEYDPNTKHCIYGLDADLIFLGLATHEPHFRVLREDVFA-NQSRQMRISDQLSMTQDQKDSIAEQDA-------------KKPFLWLHVNVLREYLEIELYNPHLSFPFDLERAIDDWVFMCFFVGNDFLPHLPSLDVRDNGIDILVNCWKRMLPKLRDYITCDGNLNLESVEKLLSSL 380
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_CANGA (5'-3' exoribonuclease 2 OS=Candida glabrata GN=RAT1 PE=3 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 1.296e-42 Identity = 93/202 (46.04%), Postives = 121/202 (59.90%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVP--KKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHLFKLL 661 + VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI L LATHE HF ILRE VF + + K DE+ D + +KP+ +LHI LREYL E P PF DLE +DD++FMCFF GNDFLPH+P L++RE +I++L+ ++K L Y+T K +L VE + K L Sbjct: 198 ATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFLGLATHEPHFKILREDVFAQDNRKR---------------NNVKDTIDMTDEEKDLIRKQDSEKPFLWLHISVLREYLSAELWTPKLPFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIWKSILPRLKTYMTCDGKLNLESVEMVLKEL 384
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_ASHGO (5'-3' exoribonuclease 2 OS=Ashbya gossypii GN=RAT1 PE=3 SV=3) HSP 1 Score: 170.244 bits (430), Expect = 1.433e-41 Identity = 90/200 (45.00%), Postives = 123/200 (61.50%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHLFKLL 661 + VPGEGEHKIM+++R QR Y+PNT HC+YGLDADLI L LATHE HF ILRE VF + + H + + K+ E D + KP+ +LH+ LREYL E +P F DLE +DD++FMCFF GNDFLPH+P+L++RE +I++L+ ++K +L YLT K +L+ VE + L Sbjct: 198 ATVPGEGEHKIMNFIRSQRADVQYNPNTTHCIYGLDADLIFLGLATHEPHFKILREDVFAQDNRRR-----PRQHDMMDMSAEEKQALIEQDAE--------KPFLWLHVSVLREYLSAELLVPRLAFHFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRENSIDILVDIWKAVLPSLKTYLTCDGKLNLKGVEKVLAQL 384
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_YEAST (5'-3' exoribonuclease 2 OS=Saccharomyces cerevisiae GN=RAT1 PE=1 SV=3) HSP 1 Score: 168.703 bits (426), Expect = 4.169e-41 Identity = 91/200 (45.50%), Postives = 124/200 (62.00%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHLFKLL 661 + VPGEGEHKIM+++R QR P Y+PNT HC+YGLDADLI L LATHE HF ILRE VF + + +L + K +F +K + ++P+ +LHI LREYL E +P PF DLE +DD++FMCFF GNDFLPH+P L++RE +I++L+ ++K L Y+T +L VE L + L Sbjct: 198 ATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFLGLATHEPHFKILREDVFAQDNRKR-------NNLKDTINMTEEEK--QFLQKQNS----EQPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILLDIWKVVLPKLKTYMTCDGVLNLPSVETLLQHL 384
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_KLULA (5'-3' exoribonuclease 2 OS=Kluyveromyces lactis GN=RAT1 PE=3 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 1.584e-40 Identity = 91/200 (45.50%), Postives = 122/200 (61.00%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHLFKLL 661 + VPGEGEHKIM+++R QR Y+PNT HC+YGLDADLI L LATHE HF ILRE VF K +P + N + K++ + D + KP+ +LHI LREYL E IP+ F+ D E +DD++FMCFF GNDFLPH+P L++RE +I++L+ ++K YLT +L VE L + L Sbjct: 198 ATVPGEGEHKIMNFIRSQRADTQYNPNTTHCIYGLDADLIFLGLATHEPHFKILREDVFANNNYKK----PKPQDMI-NLSEEEKQQLIQQDSE--------KPFLWLHISVLREYLSAELAIPHLSFQFDFERAIDDWVFMCFFCGNDFLPHLPCLDVRENSIDILVDIWKTVLPKTKTYLTCDGTLNLEPVEALLEQL 384
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN1_SCHPO (5'-3' exoribonuclease 1 OS=Schizosaccharomyces pombe GN=exo2 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.303e-38 Identity = 86/194 (44.33%), Postives = 116/194 (59.79%), Query Frame = 2 Query: 71 PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILR-EVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNP--PFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 643 PGEGEHKIM Y+R Q+ P Y+PNTRHCLYGLDADLIML L +H+ HF +LR EV F P ++ ++K A + + LH+ LREYL++EF+ F+ DLE I+DDFI + FFVGNDFLPH+P L I EGA+ L+ ++YKK + GGY+ + ++ R+E Sbjct: 173 PGEGEHKIMEYIRTQKAQPSYNPNTRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGPASRN-----------------RSKELA-------------HQKFYLLHLSLLREYLEFEFQECRSTFTFKYDLEKILDDFILLAFFVGNDFLPHLPGLHINEGALALMFSIYKKVMPSAGGYINEKGVINMARLE 336
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN1_HUMAN (5'-3' exoribonuclease 1 OS=Homo sapiens GN=XRN1 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 3.092e-36 Identity = 87/205 (42.44%), Postives = 113/205 (55.12%), Query Frame = 2 Query: 71 PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE-HLFKLLDLMR 673 PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIML L +HE HFS+LRE V G +K V P++ + LH+ +REY+DYEF + F+ D+E I+DD+I M F VGNDF+PH+P L I A+ LL Y LGGY+ + +L R E +L KL D R Sbjct: 174 PGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGG------------------------------KKTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDR 348
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN1_MOUSE (5'-3' exoribonuclease 1 OS=Mus musculus GN=Xrn1 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.175e-35 Identity = 87/205 (42.44%), Postives = 112/205 (54.63%), Query Frame = 2 Query: 71 PGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKK-PYQFLHIWTLREYLDYEFRI--PNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE-HLFKLLDLMR 673 PGEGEHKIM ++R ++ P +DPNTRHCLYGLDADLIML L +HE HFS+LRE V G +K V P++ + LH+ +REY+DYEF F+ D+E I+DD+I M F VGNDF+PH+P L I A+ LL Y LGGY+ + +L R E +L KL D R Sbjct: 174 PGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGG------------------------------KKTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDR 348
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_YARLI (5'-3' exoribonuclease 2 OS=Yarrowia lipolytica GN=RAT1 PE=3 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 2.004e-35 Identity = 85/200 (42.50%), Postives = 115/200 (57.50%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEI--DLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHLFK 655 + VPGEGEHKIM ++R QR P Y+ NT HC+YGLDADLI L LATHE F +LRE VF +Q+K GH KKP+ +L+I LREYL + R +P +I DLE +DD++F+CFFVGNDFLPH+P ++R+G+IN+L+ +K Y+T +L + + L K Sbjct: 215 ATVPGEGEHKIMEFIRSQRGDPTYNANTSHCIYGLDADLIFLGLATHEPKFKLLREDVF---RQNK-----TAGH-------------------------QKKPFIWLNIDILREYLREDLRFTHPQTKIPFDLERAIDDWVFLCFFVGNDFLPHLPACDVRDGSINVLVNQWKNGMTRWKDYITCDGHVNLAQAQDLLK 381
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN1_YEAST (5'-3' exoribonuclease 1 OS=Saccharomyces cerevisiae GN=KEM1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.648e-30 Identity = 74/193 (38.34%), Postives = 112/193 (58.03%), Query Frame = 2 Query: 68 VPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFR--IPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRV 640 VPGEGEHKIM+++R ++ ++ NTRHC+YGLDADLIML L+TH HF++LRE V T G++ N E K+ + + + LH+ LREY++ EF+ FE + E I+DDFI + F +GNDFLP++P L + +GA +L+ +K+ GY+ + K +L+R+ Sbjct: 173 VPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEV-TFGRR--------------NSEKKS---------------LEHQNFYLLHLSLLREYMELEFKEIADEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHTDGYINEHGKINLKRL 335 The following BLAST results are available for this feature:
BLAST of EY729058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY729058 ID=EY729058; Name=EY729058; organism=Citrus sinensis; type=EST; length=921bpback to top |