EY729045

Overview
NameEY729045
Unique NameEY729045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length226
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSEA7 (Agmatine deiminase OS=Pseudomonas aeruginosa (strain PA7) GN=aguA PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.741e-29
Identity = 54/69 (78.26%), Postives = 59/69 (85.51%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDETDGHVDNFCCYVRPGEVLLAWTDD  DPNY RC AA+ +L+ S DA+GR   VHKMPIPGPLYAT
Sbjct:  210 YNDETDGHVDNFCCYVRPGEVLLAWTDDQDDPNYLRCQAALRILEESRDAKGRKLVVHKMPIPGPLYAT 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSEAE (Agmatine deiminase OS=Pseudomonas aeruginosa GN=aguA PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.056e-28
Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDETDGHVDNFCCY RPGEVLLAWTDD  DPNY RC AA+ VL+ S DA+GR   VHKMPIPGPLYAT
Sbjct:  210 YNDETDGHVDNFCCYARPGEVLLAWTDDQDDPNYLRCQAALRVLEESRDAKGRKLVVHKMPIPGPLYAT 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSEU5 (Agmatine deiminase OS=Pseudomonas stutzeri (strain A1501) GN=aguA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.353e-28
Identity = 54/69 (78.26%), Postives = 61/69 (88.41%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            FNDETDGHVDNFCC+VRPGEVLLAWTDD  DPNYARC AAM VLQ + DA+GR+  VHK+PIPGPL+A+
Sbjct:  210 FNDETDGHVDNFCCFVRPGEVLLAWTDDANDPNYARCQAAMAVLQRARDAKGRALIVHKIPIPGPLHAS 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_PSEMY (Agmatine deiminase OS=Pseudomonas mendocina (strain ymp) GN=aguA PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.846e-28
Identity = 53/69 (76.81%), Postives = 59/69 (85.51%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDETDGHVDNFCCYVRPGEVLLAWTDD  DPNY RC AAM VL+S  DA+GR   VHKMPIPGP++A+
Sbjct:  210 YNDETDGHVDNFCCYVRPGEVLLAWTDDQNDPNYPRCQAAMRVLESVRDAKGRQLIVHKMPIPGPIHAS 278          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_SHEFN (Putative agmatine deiminase OS=Shewanella frigidimarina (strain NCIMB 400) GN=aguA PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.077e-23
Identity = 44/69 (63.77%), Postives = 53/69 (76.81%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            + DETDGH+DN CC+ RPGEV+L WTDD  DP Y R  AA+D+LQ++ DAQGR  TVH +P PGPLY T
Sbjct:  215 YMDETDGHIDNLCCFARPGEVVLHWTDDQSDPQYPRSKAALDILQNTVDAQGRKLTVHLIPQPGPLYCT 283          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_YERPS (Putative agmatine deiminase OS=Yersinia pseudotuberculosis GN=aguA PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.929e-22
Identity = 44/69 (63.77%), Postives = 53/69 (76.81%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDETDGH+DN CC+VRPGEV L WTDD QDP YAR  AA +VL ++ DA+GR   + K+P PGPLY T
Sbjct:  211 YNDETDGHIDNMCCFVRPGEVALHWTDDQQDPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNT 279          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_YERPE (Putative agmatine deiminase OS=Yersinia pestis GN=aguA PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.929e-22
Identity = 44/69 (63.77%), Postives = 53/69 (76.81%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDETDGH+DN CC+VRPGEV L WTDD QDP YAR  AA +VL ++ DA+GR   + K+P PGPLY T
Sbjct:  211 YNDETDGHIDNMCCFVRPGEVALHWTDDQQDPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNT 279          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_YERP3 (Putative agmatine deiminase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=aguA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.929e-22
Identity = 44/69 (63.77%), Postives = 53/69 (76.81%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            +NDETDGH+DN CC+VRPGEV L WTDD QDP YAR  AA +VL ++ DA+GR   + K+P PGPLY T
Sbjct:  211 YNDETDGHIDNMCCFVRPGEVALHWTDDQQDPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNT 279          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_SHESM (Putative agmatine deiminase OS=Shewanella sp. (strain MR-4) GN=aguA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.929e-22
Identity = 43/69 (62.32%), Postives = 52/69 (75.36%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            + DETDGH+DN CC+ RPGEV+L WTDD  DP Y R  AA+DVLQ++ DAQGR   +H +P PGPLY T
Sbjct:  215 YMDETDGHIDNMCCFARPGEVILHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCT 283          
BLAST of EY729045 vs. ExPASy Swiss-Prot
Match: AGUA_SHESA (Putative agmatine deiminase OS=Shewanella sp. (strain ANA-3) GN=aguA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.929e-22
Identity = 43/69 (62.32%), Postives = 52/69 (75.36%), Query Frame = -2
Query:   19 FNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAAMDVLQSSTDAQGRSFTVHKMPIPGPLYAT 225
            + DETDGH+DN CC+ RPGEV+L WTDD  DP Y R  AA+DVLQ++ DAQGR   +H +P PGPLY T
Sbjct:  215 YMDETDGHIDNMCCFARPGEVILHWTDDETDPQYPRSKAALDVLQNTVDAQGRKLKIHLLPQPGPLYCT 283          
The following BLAST results are available for this feature:
BLAST of EY729045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
AGUA_PSEA74.741e-2978.26Agmatine deiminase OS=Pseudomonas aeruginosa (stra... [more]
AGUA_PSEAE1.056e-2878.26Agmatine deiminase OS=Pseudomonas aeruginosa GN=ag... [more]
AGUA_PSEU52.353e-2878.26Agmatine deiminase OS=Pseudomonas stutzeri (strain... [more]
AGUA_PSEMY6.846e-2876.81Agmatine deiminase OS=Pseudomonas mendocina (strai... [more]
AGUA_SHEFN5.077e-2363.77Putative agmatine deiminase OS=Shewanella frigidim... [more]
AGUA_YERPS1.929e-2263.77Putative agmatine deiminase OS=Yersinia pseudotube... [more]
AGUA_YERPE1.929e-2263.77Putative agmatine deiminase OS=Yersinia pestis GN=... [more]
AGUA_YERP31.929e-2263.77Putative agmatine deiminase OS=Yersinia pseudotube... [more]
AGUA_SHESM1.929e-2262.32Putative agmatine deiminase OS=Shewanella sp. (str... [more]
AGUA_SHESA1.929e-2262.32Putative agmatine deiminase OS=Shewanella sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-H04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729045 ID=EY729045; Name=EY729045; organism=Citrus sinensis; type=EST; length=226bp
CCGGCGCATTCTTCCTCNGGTTGCGTACAGCGGCCCCGGGATCGGCATTT
TATGCACTGTGAACGAGCGGCCCTGAGCGTCAGTGCTGCTTTGCAGTACG
TCCATGGCGGCATGGCAGCGTGCGTAGTTTGGGTCTTGCGGGTCGTCGGT
CCACGCCAGCAACACTTCGCCCGGGCGCACGTAGCAGCAGAAGTTATCCA
CATGCCCGTCGGTTTCGTCATTGAAC
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